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Annotations
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Instances
Model
Properties
Source
Used by

Table of Contents

Group by:

http://types.apollo.pitt.edu/v4_0_1/

Complex Types
Simple Types
Main schema updated_apollo[1].xsd
Namespace http://types.apollo.pitt.edu/v4_0_1/
Properties
attribute form default unqualified
element form default qualified
[ top ]
Element tns:InfectiousDiseaseScenario / tns:scenarioDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that refers to a real date corresponding to simulator time zero.
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="scenarioDate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000185" type="dateTime" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An information content entity that refers to a real date corresponding to simulator time zero.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:scenarioLocation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription apollo.tmp#Location
Type tns:Location
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Instance
 
<tns:scenarioLocation xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:locationDefinition>{1,1}</tns:locationDefinition>
  <tns:cartesianCircleLocationDefinition>{1,1}</tns:cartesianCircleLocationDefinition>
  <tns:textualDescription>{0,1}</tns:textualDescription>
</tns:scenarioLocation>
Source
 
<element name="scenarioLocation" type="tns:Location" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Location / tns:apolloLocationCode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to a particular geographical region and that is constructed per guidelines of the Apollo project.
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="apolloLocationCode" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000259" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that refers to a particular geographical region and that is constructed per guidelines of the Apollo project.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Location / tns:locationDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies a geographical region by (1) listing the names of other geographical regions whose mereological sum constitutes it and optionally (2) listing the names of other geographical regions that are subsequently subtracted from the mereological sum.
Diagram
Diagram apollo.tmp#LocationDefinition_locationsIncluded apollo.tmp#LocationDefinition_locationsExcluded apollo.tmp#LocationDefinition_multiGeometries apollo.tmp#LocationDefinition
Type tns:LocationDefinition
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:locationsExcluded, tns:locationsIncluded, tns:multiGeometries
Instance
 
<tns:locationDefinition xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:locationsIncluded>{1,unbounded}</tns:locationsIncluded>
  <tns:locationsExcluded>{0,unbounded}</tns:locationsExcluded>
  <tns:multiGeometries>{0,unbounded}</tns:multiGeometries>
</tns:locationDefinition>
Source
 
<element name="locationDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000377" type="tns:LocationDefinition" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An information content entity that specifies a geographical region by (1) listing the names of other geographical regions whose mereological sum constitutes it and optionally (2) listing the names of other geographical regions that are subsequently subtracted from the mereological sum.</documentation>
  </annotation>
</element>
[ top ]
Element tns:LocationDefinition / tns:locationsIncluded
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 1
maxOccurs unbounded
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="locationsIncluded" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:LocationDefinition / tns:locationsExcluded
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 0
maxOccurs unbounded
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="locationsExcluded" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:LocationDefinition / tns:multiGeometries
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#MultiGeometry_polygons apollo.tmp#MultiGeometry
Type tns:MultiGeometry
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:polygons
Instance
 
<tns:multiGeometries xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:polygons>{1,unbounded}</tns:polygons>
</tns:multiGeometries>
Source
 
<element name="multiGeometries" type="tns:MultiGeometry" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:MultiGeometry / tns:polygons
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LocationPolygon_linearRing apollo.tmp#LocationPolygon
Type tns:LocationPolygon
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:linearRing
Instance
 
<tns:polygons xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:linearRing>{1,1}</tns:linearRing>
</tns:polygons>
Source
 
<element name="polygons" type="tns:LocationPolygon" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:LocationPolygon / tns:linearRing
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="linearRing" type="string"/>
[ top ]
Element tns:Location / tns:cartesianCircleLocationDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CartesianCircleLocationDefinition_eastWestOffsetFromCartesianCenter apollo.tmp#CartesianCircleLocationDefinition_northSouthOffsetFromCartesianCenter apollo.tmp#CartesianCircleLocationDefinition_altitudeRelativeToCartesianCenter apollo.tmp#CartesianCircleLocationDefinition_radius apollo.tmp#CartesianCircleLocationDefinition
Type tns:CartesianCircleLocationDefinition
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:altitudeRelativeToCartesianCenter, tns:eastWestOffsetFromCartesianCenter, tns:northSouthOffsetFromCartesianCenter, tns:radius
Instance
 
<tns:cartesianCircleLocationDefinition xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:eastWestOffsetFromCartesianCenter>{1,1}</tns:eastWestOffsetFromCartesianCenter>
  <tns:northSouthOffsetFromCartesianCenter>{1,1}</tns:northSouthOffsetFromCartesianCenter>
  <tns:altitudeRelativeToCartesianCenter>{1,1}</tns:altitudeRelativeToCartesianCenter>
  <tns:radius>{1,1}</tns:radius>
</tns:cartesianCircleLocationDefinition>
Source
 
<element name="cartesianCircleLocationDefinition" type="tns:CartesianCircleLocationDefinition" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:CartesianCircleLocationDefinition / tns:eastWestOffsetFromCartesianCenter
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:eastWestOffsetFromCartesianCenter xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:eastWestOffsetFromCartesianCenter>
Source
 
<element name="eastWestOffsetFromCartesianCenter" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Distance / tns:unitOfDistance
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfDistanceEnum
Type tns:UnitOfDistanceEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration meters
enumeration inches
enumeration miles
Source
 
<element name="unitOfDistance" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000001" type="tns:UnitOfDistanceEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Distance / tns:value
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="value" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:CartesianCircleLocationDefinition / tns:northSouthOffsetFromCartesianCenter
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:northSouthOffsetFromCartesianCenter xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:northSouthOffsetFromCartesianCenter>
Source
 
<element name="northSouthOffsetFromCartesianCenter" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CartesianCircleLocationDefinition / tns:altitudeRelativeToCartesianCenter
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:altitudeRelativeToCartesianCenter xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:altitudeRelativeToCartesianCenter>
Source
 
<element name="altitudeRelativeToCartesianCenter" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CartesianCircleLocationDefinition / tns:radius
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:radius xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:radius>
Source
 
<element name="radius" sawsdl:modelReference="http://purl.obolibrary.org/obo/PATO_0002390" type="tns:Distance" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Location / tns:textualDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="textualDescription" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:populations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Population_location apollo.tmp#Population_taxonId apollo.tmp#Population_count apollo.tmp#Population_infectionAndImmunityCensuses apollo.tmp#Population_colonizationCensuses apollo.tmp#Population_individualsAndHouseholds apollo.tmp#Population_pointerToIndividualsAndHouseholds apollo.tmp#Population_individualBiologyAndBehavior apollo.tmp#Population
Type tns:Population
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:colonizationCensuses, tns:count, tns:individualBiologyAndBehavior, tns:individualsAndHouseholds, tns:infectionAndImmunityCensuses, tns:location, tns:pointerToIndividualsAndHouseholds, tns:taxonId
Instance
 
<tns:populations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:location>{1,1}</tns:location>
  <tns:taxonId>{1,1}</tns:taxonId>
  <tns:count>{0,1}</tns:count>
  <tns:infectionAndImmunityCensuses>{0,unbounded}</tns:infectionAndImmunityCensuses>
  <tns:colonizationCensuses>{0,unbounded}</tns:colonizationCensuses>
  <tns:individualsAndHouseholds>{0,1}</tns:individualsAndHouseholds>
  <tns:pointerToIndividualsAndHouseholds>{0,1}</tns:pointerToIndividualsAndHouseholds>
  <tns:individualBiologyAndBehavior>{0,1}</tns:individualBiologyAndBehavior>
</tns:populations>
Source
 
<element name="populations" type="tns:Population" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Population / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="location" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Population / tns:taxonId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that denotes a biological taxonomic group.
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="taxonId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000509" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that denotes a biological taxonomic group.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Population / tns:count
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum that is the output of counting.
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="count" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000032" type="positiveInteger" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A measurement datum that is the output of counting.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Population / tns:infectionAndImmunityCensuses
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#PopulationInfectionAndImmunityCensus_pathogen apollo.tmp#PopulationInfectionAndImmunityCensus_censusData apollo.tmp#PopulationInfectionAndImmunityCensus
Type tns:PopulationInfectionAndImmunityCensus
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:censusData, tns:description, tns:location, tns:pathogen, tns:referenceDate, tns:simulatorTime
Instance
 
<tns:infectionAndImmunityCensuses xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{1,1}</tns:location>
  <tns:simulatorTime>{1,1}</tns:simulatorTime>
  <tns:referenceDate>{0,1}</tns:referenceDate>
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:censusData>{1,1}</tns:censusData>
</tns:infectionAndImmunityCensuses>
Source
 
<element name="infectionAndImmunityCensuses" type="tns:PopulationInfectionAndImmunityCensus" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Census / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Census / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription apollo.tmp#Location
Type tns:Location
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Instance
 
<tns:location xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:locationDefinition>{1,1}</tns:locationDefinition>
  <tns:cartesianCircleLocationDefinition>{1,1}</tns:cartesianCircleLocationDefinition>
  <tns:textualDescription>{0,1}</tns:textualDescription>
</tns:location>
Source
 
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Census / tns:simulatorTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A numeral that indexes a specific time step of a simulation.
Diagram
Diagram
Type int
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="simulatorTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000069" type="int" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A numeral that indexes a specific time step of a simulation.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Census / tns:referenceDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A information content entity that specifies the date of a census.
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceDate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000240" type="dateTime" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A information content entity that specifies the date of a census.</documentation>
  </annotation>
</element>
[ top ]
Element tns:PopulationInfectionAndImmunityCensus / tns:pathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:pathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:pathogen>
Source
 
<element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ApolloPathogenCode / tns:ncbiTaxonId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="ncbiTaxonId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ApolloPathogenCode / tns:cladeName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that denotes a group of organisms or groups of organisms based on common ancestors.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="cladeName" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000232" type="token" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An identifier that denotes a group of organisms or groups of organisms based on common ancestors.</documentation>
  </annotation>
</element>
[ top ]
Element tns:PopulationInfectionAndImmunityCensus / tns:censusData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#PopulationInfectionAndImmunityCensusData_censusDataCells apollo.tmp#PopulationInfectionAndImmunityCensusData_exceptionSubpopulations apollo.tmp#PopulationInfectionAndImmunityCensusData
Type tns:PopulationInfectionAndImmunityCensusData
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:censusDataCells, tns:date, tns:exceptionSubpopulations, tns:location
Instance
 
<tns:censusData xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:date>{0,1}</tns:date>
  <tns:location>{1,1}</tns:location>
  <tns:censusDataCells>{1,unbounded}</tns:censusDataCells>
  <tns:exceptionSubpopulations>{0,unbounded}</tns:exceptionSubpopulations>
</tns:censusData>
Source
 
<element name="censusData" type="tns:PopulationInfectionAndImmunityCensusData" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:CensusData / tns:date
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A name of a temporal region that is systematized according to a particular calendar system, such as the Gregorian calendar.
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="dateTime" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A name of a temporal region that is systematized according to a particular calendar system, such as the Gregorian calendar.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CensusData / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription apollo.tmp#Location
Type tns:Location
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Instance
 
<tns:location xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:locationDefinition>{1,1}</tns:locationDefinition>
  <tns:cartesianCircleLocationDefinition>{1,1}</tns:cartesianCircleLocationDefinition>
  <tns:textualDescription>{0,1}</tns:textualDescription>
</tns:location>
Source
 
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PopulationInfectionAndImmunityCensusData / tns:censusDataCells
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_ageRange apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_sex apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_infectionState apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_diseaseState apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_fractionInState apollo.tmp#PopulationInfectionAndImmunityCensusDataCell
Type tns:PopulationInfectionAndImmunityCensusDataCell
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:ageRange, tns:diseaseState, tns:fractionInState, tns:infectionState, tns:sex
Instance
 
<tns:censusDataCells xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ageRange>{0,1}</tns:ageRange>
  <tns:sex>{0,1}</tns:sex>
  <tns:infectionState>{1,1}</tns:infectionState>
  <tns:diseaseState>{1,1}</tns:diseaseState>
  <tns:fractionInState>{1,1}</tns:fractionInState>
</tns:censusDataCells>
Source
 
<element name="censusDataCells" type="tns:PopulationInfectionAndImmunityCensusDataCell" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:PopulationInfectionAndImmunityCensusDataCell / tns:ageRange
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#AgeRangeCategoryDefinition_label apollo.tmp#AgeRangeCategoryDefinition_unitOfTimeForLowerBound apollo.tmp#AgeRangeCategoryDefinition_lowerBound apollo.tmp#AgeRangeCategoryDefinition_unitOfTimeForUpperBound apollo.tmp#AgeRangeCategoryDefinition_upperBound apollo.tmp#AgeRangeCategoryDefinition
Type tns:AgeRangeCategoryDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:label, tns:lowerBound, tns:unitOfTimeForLowerBound, tns:unitOfTimeForUpperBound, tns:upperBound
Instance
 
<tns:ageRange xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:label>{0,1}</tns:label>
  <tns:unitOfTimeForLowerBound>{1,1}</tns:unitOfTimeForLowerBound>
  <tns:lowerBound>{1,1}</tns:lowerBound>
  <tns:unitOfTimeForUpperBound>{1,1}</tns:unitOfTimeForUpperBound>
  <tns:upperBound>{1,1}</tns:upperBound>
</tns:ageRange>
Source
 
<element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:AgeRangeCategoryDefinition / tns:label
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="label" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000009" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:AgeRangeCategoryDefinition / tns:unitOfTimeForLowerBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfTimeEnum
Type tns:UnitOfTimeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration year
enumeration month
enumeration day
enumeration hour
enumeration minute
enumeration second
enumeration millisecond
Source
 
<element name="unitOfTimeForLowerBound" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:AgeRangeCategoryDefinition / tns:lowerBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Bound_finiteBoundary apollo.tmp#Bound_finiteBoundaryType apollo.tmp#Bound_infiniteBoundary apollo.tmp#Bound
Type tns:Bound
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:finiteBoundary, tns:finiteBoundaryType, tns:infiniteBoundary
Instance
 
<tns:lowerBound xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:finiteBoundary>{1,1}</tns:finiteBoundary>
  <tns:finiteBoundaryType>{1,1}</tns:finiteBoundaryType>
  <tns:infiniteBoundary>{1,1}</tns:infiniteBoundary>
</tns:lowerBound>
Source
 
<element name="lowerBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000436" type="tns:Bound" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Bound / tns:finiteBoundary
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="finiteBoundary" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Bound / tns:finiteBoundaryType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#FiniteBoundaryTypeEnum
Type tns:FiniteBoundaryTypeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration inclusive
enumeration notInclusive
Source
 
<element name="finiteBoundaryType" type="tns:FiniteBoundaryTypeEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Bound / tns:infiniteBoundary
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfinityEnum
Type tns:InfinityEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration positiveInfinity
enumeration negativeInfinity
Source
 
<element name="infiniteBoundary" type="tns:InfinityEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:AgeRangeCategoryDefinition / tns:unitOfTimeForUpperBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfTimeEnum
Type tns:UnitOfTimeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration year
enumeration month
enumeration day
enumeration hour
enumeration minute
enumeration second
enumeration millisecond
Source
 
<element name="unitOfTimeForUpperBound" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:AgeRangeCategoryDefinition / tns:upperBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Bound_finiteBoundary apollo.tmp#Bound_finiteBoundaryType apollo.tmp#Bound_infiniteBoundary apollo.tmp#Bound
Type tns:Bound
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:finiteBoundary, tns:finiteBoundaryType, tns:infiniteBoundary
Instance
 
<tns:upperBound xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:finiteBoundary>{1,1}</tns:finiteBoundary>
  <tns:finiteBoundaryType>{1,1}</tns:finiteBoundaryType>
  <tns:infiniteBoundary>{1,1}</tns:infiniteBoundary>
</tns:upperBound>
Source
 
<element name="upperBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000447" type="tns:Bound" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationInfectionAndImmunityCensusDataCell / tns:sex
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A human social role borne by a human being being realized in behaviour which is considered socially appropriate for individuals of a specific sex in the context of a specific culture.
Diagram
Diagram apollo.tmp#GenderEnum
Type tns:GenderEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration M
enumeration F
enumeration U
Source
 
<element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A human social role borne by a human being being realized in behaviour which is considered socially appropriate for individuals of a specific sex in the context of a specific culture.</documentation>
  </annotation>
</element>
[ top ]
Element tns:PopulationInfectionAndImmunityCensusDataCell / tns:infectionState
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that specifies the epidemiologically-relevant state of a host organism at a specific time with respect to infection with a particular pathogen.
Diagram
Diagram apollo.tmp#InfectionStateEnum
Type tns:InfectionStateEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration susceptible
enumeration greaterThanOrEqualToId50Exposure
enumeration latent
enumeration infectious
enumeration recovered
enumeration immuneAndActsLikeImmune
enumeration immuneButActsLikeNotImmune
enumeration newly_sick
Source
 
<element name="infectionState" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000217" type="tns:InfectionStateEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A data item that specifies the epidemiologically-relevant state of a host organism at a specific time with respect to infection with a particular pathogen.</documentation>
  </annotation>
</element>
[ top ]
Element tns:PopulationInfectionAndImmunityCensusDataCell / tns:diseaseState
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="diseaseState" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PopulationInfectionAndImmunityCensusDataCell / tns:fractionInState
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionInState" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000135" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationInfectionAndImmunityCensusData / tns:exceptionSubpopulations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#PopulationInfectionAndImmunityCensusData_censusDataCells apollo.tmp#PopulationInfectionAndImmunityCensusData_exceptionSubpopulations apollo.tmp#PopulationInfectionAndImmunityCensusData
Type tns:PopulationInfectionAndImmunityCensusData
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:censusDataCells, tns:date, tns:exceptionSubpopulations, tns:location
Instance
 
<tns:exceptionSubpopulations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:date>{0,1}</tns:date>
  <tns:location>{1,1}</tns:location>
  <tns:censusDataCells>{1,unbounded}</tns:censusDataCells>
  <tns:exceptionSubpopulations>{0,unbounded}</tns:exceptionSubpopulations>
</tns:exceptionSubpopulations>
Source
 
<element name="exceptionSubpopulations" type="tns:PopulationInfectionAndImmunityCensusData" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Population / tns:colonizationCensuses
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PopulationColonizationCensus
Type tns:PopulationColonizationCensus
Properties
content complex
minOccurs 0
maxOccurs unbounded
Source
 
<element name="colonizationCensuses" type="tns:PopulationColonizationCensus" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Population / tns:individualsAndHouseholds
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualsAndHouseholds_individuals apollo.tmp#IndividualsAndHouseholds_households apollo.tmp#IndividualsAndHouseholds
Type tns:IndividualsAndHouseholds
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:households, tns:individuals
Instance
 
<tns:individualsAndHouseholds xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:individuals>{1,unbounded}</tns:individuals>
  <tns:households>{0,unbounded}</tns:households>
</tns:individualsAndHouseholds>
Source
 
<element name="individualsAndHouseholds" type="tns:IndividualsAndHouseholds" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:IndividualsAndHouseholds / tns:individuals
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Individual_individualId apollo.tmp#Individual_age apollo.tmp#Individual_characteristics apollo.tmp#Individual
Type tns:Individual
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:age, tns:characteristics, tns:individualId
Instance
 
<tns:individuals xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:individualId>{1,1}</tns:individualId>
  <tns:age>{0,1}</tns:age>
  <tns:characteristics>{0,unbounded}</tns:characteristics>
</tns:individuals>
Source
 
<element name="individuals" type="tns:Individual" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Individual / tns:individualId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="individualId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Individual / tns:age
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration apollo.tmp#FixedDuration_value apollo.tmp#FixedDuration
Type tns:FixedDuration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime, tns:value
Instance
 
<tns:age xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:value>{1,1}</tns:value>
</tns:age>
Source
 
<element name="age" type="tns:FixedDuration" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Duration / tns:unitOfTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfTimeEnum
Type tns:UnitOfTimeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration year
enumeration month
enumeration day
enumeration hour
enumeration minute
enumeration second
enumeration millisecond
Source
 
<element name="unitOfTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000003" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Duration / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that is an integer numeral that denotes some citation.
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An identifier that is an integer numeral that denotes some citation.</documentation>
  </annotation>
</element>
[ top ]
Element tns:FixedDuration / tns:value
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="value" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Individual / tns:characteristics
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Characteristic_enumeratedName apollo.tmp#Characteristic_userInventedName apollo.tmp#Characteristic_value apollo.tmp#Characteristic
Type tns:Characteristic
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:enumeratedName, tns:userInventedName, tns:value
Instance
 
<tns:characteristics xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:enumeratedName>{1,1}</tns:enumeratedName>
  <tns:userInventedName>{1,1}</tns:userInventedName>
  <tns:value>{1,1}</tns:value>
</tns:characteristics>
Source
 
<element name="characteristics" type="tns:Characteristic" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Characteristic / tns:enumeratedName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CharacteristicEnum
Type tns:CharacteristicEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration maritalStatus
enumeration schoolingStatus
enumeration employmentStatus
enumeration occupation
enumeration disabilityStatus
Source
 
<element name="enumeratedName" type="tns:CharacteristicEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Characteristic / tns:userInventedName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="userInventedName" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Characteristic / tns:value
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition
Type tns:CategoryDefinition
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="value" type="tns:CategoryDefinition" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:IndividualsAndHouseholds / tns:households
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Household_householdId apollo.tmp#Household_groupQuarters apollo.tmp#Household_unRelated apollo.tmp#Household_individualIds apollo.tmp#Household
Type tns:Household
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:groupQuarters, tns:householdId, tns:individualIds, tns:unRelated
Instance
 
<tns:households xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:householdId>{1,1}</tns:householdId>
  <tns:groupQuarters>{0,1}</tns:groupQuarters>
  <tns:unRelated>{0,1}</tns:unRelated>
  <tns:individualIds>{1,unbounded}</tns:individualIds>
</tns:households>
Source
 
<element name="households" type="tns:Household" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Household / tns:householdId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="householdId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Household / tns:groupQuarters
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="groupQuarters" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Household / tns:unRelated
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="unRelated" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Household / tns:individualIds
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs unbounded
Source
 
<element name="individualIds" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Population / tns:pointerToIndividualsAndHouseholds
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PointerToData_dataType apollo.tmp#PointerToData_xmlFormat apollo.tmp#PointerToData_csvFormat apollo.tmp#PointerToData
Type tns:PointerToData
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:csvFormat, tns:dataType, tns:xmlFormat
Instance
 
<tns:pointerToIndividualsAndHouseholds xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:dataType>{1,1}</tns:dataType>
  <tns:xmlFormat>{1,1}</tns:xmlFormat>
  <tns:csvFormat>{1,1}</tns:csvFormat>
</tns:pointerToIndividualsAndHouseholds>
Source
 
<element name="pointerToIndividualsAndHouseholds" type="tns:PointerToData" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PointerToData / tns:dataType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DataTypeEnum
Type tns:DataTypeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration SyntheticEcosystem
Source
 
<element name="dataType" type="tns:DataTypeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PointerToData / tns:xmlFormat
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type anyURI
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="xmlFormat" type="anyURI" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PointerToData / tns:csvFormat
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type anyURI
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="csvFormat" type="anyURI" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Population / tns:individualBiologyAndBehavior
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualBiologyAndBehavior_lifeCycle apollo.tmp#IndividualBiologyAndBehavior_reproduction apollo.tmp#IndividualBiologyAndBehavior_behavior apollo.tmp#IndividualBiologyAndBehavior
Type tns:IndividualBiologyAndBehavior
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:behavior, tns:lifeCycle, tns:reproduction
Instance
 
<tns:individualBiologyAndBehavior xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:lifeCycle>{0,1}</tns:lifeCycle>
  <tns:reproduction>{0,1}</tns:reproduction>
  <tns:behavior>{0,1}</tns:behavior>
</tns:individualBiologyAndBehavior>
Source
 
<element name="individualBiologyAndBehavior" type="tns:IndividualBiologyAndBehavior" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:IndividualBiologyAndBehavior / tns:lifeCycle
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LifeCycle_lifeStagesWithDurationsAndMortalities apollo.tmp#LifeCycle
Type tns:LifeCycle
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:lifeStagesWithDurationsAndMortalities
Instance
 
<tns:lifeCycle xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:lifeStagesWithDurationsAndMortalities>{1,unbounded}</tns:lifeStagesWithDurationsAndMortalities>
</tns:lifeCycle>
Source
 
<element name="lifeCycle" type="tns:LifeCycle" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:LifeCycle / tns:lifeStagesWithDurationsAndMortalities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LifeStageWithDurationAndMortality_stage apollo.tmp#LifeStageWithDurationAndMortality_duration apollo.tmp#LifeStageWithDurationAndMortality_mortalityRate apollo.tmp#LifeStageWithDurationAndMortality_mortalityFunction apollo.tmp#LifeStageWithDurationAndMortality
Type tns:LifeStageWithDurationAndMortality
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:duration, tns:mortalityFunction, tns:mortalityRate, tns:stage
Instance
 
<tns:lifeStagesWithDurationsAndMortalities xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:stage>{1,1}</tns:stage>
  <tns:duration>{1,1}</tns:duration>
  <tns:mortalityRate>{1,1}</tns:mortalityRate>
  <tns:mortalityFunction>{1,1}</tns:mortalityFunction>
</tns:lifeStagesWithDurationsAndMortalities>
Source
 
<element name="lifeStagesWithDurationsAndMortalities" type="tns:LifeStageWithDurationAndMortality" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:LifeStageWithDurationAndMortality / tns:stage
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DevelopmentalStageEnum
Type tns:DevelopmentalStageEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration egg
enumeration larval
enumeration pupal
enumeration larvalAndPupal
enumeration adultForm
Source
 
<element name="stage" type="tns:DevelopmentalStageEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:LifeStageWithDurationAndMortality / tns:duration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:duration xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:duration>
Source
 
<element name="duration" type="tns:Duration" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:LifeStageWithDurationAndMortality / tns:mortalityRate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A rate measurement datum that specifies the percentage of organisms within a population that have died over a given time interval.
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:mortalityRate xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:mortalityRate>
Source
 
<element name="mortalityRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000445" type="tns:Rate" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A rate measurement datum that specifies the percentage of organisms within a population that have died over a given time interval.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Rate / tns:numeratorUnitOfMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfMeasureEnum
Type tns:UnitOfMeasureEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Source
 
<element name="numeratorUnitOfMeasure" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Rate / tns:denominatorUnitOfMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfMeasureEnum
Type tns:UnitOfMeasureEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Source
 
<element name="denominatorUnitOfMeasure" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Rate / tns:value
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="value" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Rate / tns:probabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution
Type tns:ProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId
Instance
 
<tns:probabilityDistribution xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:probabilityDistribution>
Source
 
<element name="probabilityDistribution" type="tns:ProbabilityDistribution" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ProbabilityDistribution / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:LifeStageWithDurationAndMortality / tns:mortalityFunction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#MortalityFunction
Type tns:MortalityFunction
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="mortalityFunction" type="tns:MortalityFunction" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:IndividualBiologyAndBehavior / tns:reproduction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Reproduction
Type tns:Reproduction
Properties
content complex
minOccurs 0
maxOccurs 1
Source
 
<element name="reproduction" type="tns:Reproduction" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:IndividualBiologyAndBehavior / tns:behavior
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Behavior
Type tns:Behavior
Properties
content complex
minOccurs 0
maxOccurs 1
Source
 
<element name="behavior" type="tns:Behavior" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:infections
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Infection_pathogen apollo.tmp#Infection_host apollo.tmp#Infection_infectiousDiseases apollo.tmp#Infection_infectionAcquisitionsFromInfectedHosts apollo.tmp#Infection_infectionAcquisitionsFromContaminatedThings apollo.tmp#Infection_InfectionAcquisitionsFromColonizedHosts apollo.tmp#Infection
Type tns:Infection
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:InfectionAcquisitionsFromColonizedHosts, tns:host, tns:infectionAcquisitionsFromContaminatedThings, tns:infectionAcquisitionsFromInfectedHosts, tns:infectiousDiseases, tns:pathogen
Instance
 
<tns:infections xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:host>{1,1}</tns:host>
  <tns:infectiousDiseases>{0,unbounded}</tns:infectiousDiseases>
  <tns:infectionAcquisitionsFromInfectedHosts>{0,unbounded}</tns:infectionAcquisitionsFromInfectedHosts>
  <tns:infectionAcquisitionsFromContaminatedThings>{0,unbounded}</tns:infectionAcquisitionsFromContaminatedThings>
  <tns:InfectionAcquisitionsFromColonizedHosts>{0,unbounded}</tns:InfectionAcquisitionsFromColonizedHosts>
</tns:infections>
Source
 
<element name="infections" type="tns:Infection" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Infection / tns:pathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An organism of a particular biological taxon that is the bearer of an infectious dispositions towards an organism of a different particular biological taxon.
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:pathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:pathogen>
Source
 
<element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An organism of a particular biological taxon that is the bearer of an infectious dispositions towards an organism of a different particular biological taxon.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Infection / tns:host
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An organism of a particular biological taxon that is the site of reproduction of an organism of a different taxon.
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="host" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000238" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An organism of a particular biological taxon that is the site of reproduction of an organism of a different taxon.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Infection / tns:infectiousDiseases
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDisease_disease apollo.tmp#InfectiousDisease_speciesWithDisease apollo.tmp#InfectiousDisease_causalPathogen apollo.tmp#InfectiousDisease_incubationPeriod apollo.tmp#InfectiousDisease_prodromalPeriod apollo.tmp#InfectiousDisease_fulminantPeriod apollo.tmp#InfectiousDisease_otherIntervals apollo.tmp#InfectiousDisease_diseaseOutcomesWithProbabilities apollo.tmp#InfectiousDisease
Type tns:InfectiousDisease
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:causalPathogen, tns:disease, tns:diseaseOutcomesWithProbabilities, tns:fulminantPeriod, tns:incubationPeriod, tns:otherIntervals, tns:prodromalPeriod, tns:speciesWithDisease
Instance
 
<tns:infectiousDiseases xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:disease>{1,1}</tns:disease>
  <tns:speciesWithDisease>{1,1}</tns:speciesWithDisease>
  <tns:causalPathogen>{1,1}</tns:causalPathogen>
  <tns:incubationPeriod>{0,1}</tns:incubationPeriod>
  <tns:prodromalPeriod>{0,1}</tns:prodromalPeriod>
  <tns:fulminantPeriod>{0,1}</tns:fulminantPeriod>
  <tns:otherIntervals>{0,unbounded}</tns:otherIntervals>
  <tns:diseaseOutcomesWithProbabilities>{1,unbounded}</tns:diseaseOutcomesWithProbabilities>
</tns:infectiousDiseases>
Source
 
<element name="infectiousDiseases" type="tns:InfectiousDisease" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:InfectiousDisease / tns:disease
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
Diagram
Diagram apollo.tmp#SnomedId
Type tns:SnomedId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="disease" sawsdl:modelReference="http://purl.obolibrary.org/obo/OGMS_0000031" type="tns:SnomedId" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDisease / tns:speciesWithDisease
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by the NCBI taxonomy database that has been used to specify the species of some organism in which some disease has been realized.
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesWithDisease" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000484" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier curated by the NCBI taxonomy database that has been used to specify the species of some organism in which some disease has been realized.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDisease / tns:causalPathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:causalPathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:causalPathogen>
Source
 
<element name="causalPathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDisease / tns:incubationPeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A process that is part of an infectious disease course, has the same beginning temporal boundary as the disease course, and has an ending temporal boundary at the onset of symptoms due to the infectious disease.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:incubationPeriod xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:incubationPeriod>
Source
 
<element name="incubationPeriod" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000317" type="tns:Duration" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A process that is part of an infectious disease course, has the same beginning temporal boundary as the disease course, and has an ending temporal boundary at the onset of symptoms due to the infectious disease.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDisease / tns:prodromalPeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:prodromalPeriod xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:prodromalPeriod>
Source
 
<element name="prodromalPeriod" type="tns:Duration" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:InfectiousDisease / tns:fulminantPeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:fulminantPeriod xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:fulminantPeriod>
Source
 
<element name="fulminantPeriod" type="tns:Duration" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:InfectiousDisease / tns:otherIntervals
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Interval_startBoundaryDefinition apollo.tmp#Interval_endBoundaryDefinition apollo.tmp#Interval_duration apollo.tmp#Interval_readableTitle apollo.tmp#Interval_referenceId apollo.tmp#Interval
Type tns:Interval
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:duration, tns:endBoundaryDefinition, tns:readableTitle, tns:referenceId, tns:startBoundaryDefinition
Instance
 
<tns:otherIntervals xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:startBoundaryDefinition>{1,1}</tns:startBoundaryDefinition>
  <tns:endBoundaryDefinition>{1,1}</tns:endBoundaryDefinition>
  <tns:duration>{1,1}</tns:duration>
  <tns:readableTitle>{0,1}</tns:readableTitle>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:otherIntervals>
Source
 
<element name="otherIntervals" type="tns:Interval" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Interval / tns:startBoundaryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IntervalBoundaryDefinitionEnum
Type tns:IntervalBoundaryDefinitionEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration timeOfFirstSymptom
enumeration timeOfRecovery
enumeration timeOfHospitalAdmission
enumeration timeOfHospitalDischarge
enumeration timeOfDeath
enumeration timeOfWhoNotification
enumeration timeOfCaseDetection
Source
 
<element name="startBoundaryDefinition" type="tns:IntervalBoundaryDefinitionEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Interval / tns:endBoundaryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IntervalBoundaryDefinitionEnum
Type tns:IntervalBoundaryDefinitionEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration timeOfFirstSymptom
enumeration timeOfRecovery
enumeration timeOfHospitalAdmission
enumeration timeOfHospitalDischarge
enumeration timeOfDeath
enumeration timeOfWhoNotification
enumeration timeOfCaseDetection
Source
 
<element name="endBoundaryDefinition" type="tns:IntervalBoundaryDefinitionEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Interval / tns:duration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:duration xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:duration>
Source
 
<element name="duration" type="tns:Duration" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Interval / tns:readableTitle
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="readableTitle" type="token" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:Interval / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:InfectiousDisease / tns:diseaseOutcomesWithProbabilities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeWithProbability_title apollo.tmp#DiseaseOutcomeWithProbability_diseaseOutcome apollo.tmp#DiseaseOutcomeWithProbability_probability apollo.tmp#DiseaseOutcomeWithProbability
Type tns:DiseaseOutcomeWithProbability
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:diseaseOutcome, tns:probability, tns:title
Instance
 
<tns:diseaseOutcomesWithProbabilities xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:title>{0,1}</tns:title>
  <tns:diseaseOutcome>{1,1}</tns:diseaseOutcome>
  <tns:probability>{1,1}</tns:probability>
</tns:diseaseOutcomesWithProbabilities>
Source
 
<element name="diseaseOutcomesWithProbabilities" type="tns:DiseaseOutcomeWithProbability" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:DiseaseOutcomeWithProbability / tns:title
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="title" type="string" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:DiseaseOutcomeWithProbability / tns:diseaseOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="diseaseOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000204" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseOutcomeWithProbability / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:probability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:probability>
Source
 
<element name="probability" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ProbabilisticParameter / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ProbabilisticParameter / tns:probabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution
Type tns:ProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId
Instance
 
<tns:probabilityDistribution xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:probabilityDistribution>
Source
 
<element name="probabilityDistribution" type="tns:ProbabilityDistribution" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Infection / tns:infectionAcquisitionsFromInfectedHosts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionAcquisitionFromInfectedHost_infectedHost apollo.tmp#InfectionAcquisitionFromInfectedHost_latentPeriodDuration apollo.tmp#InfectionAcquisitionFromInfectedHost_infectiousPeriodDuration apollo.tmp#InfectionAcquisitionFromInfectedHost_basicReproductionNumbers apollo.tmp#InfectionAcquisitionFromInfectedHost_beta apollo.tmp#InfectionAcquisitionFromInfectedHost_transmissionProbabilities apollo.tmp#InfectionAcquisitionFromInfectedHost_inoculationRate apollo.tmp#InfectionAcquisitionFromInfectedHost
Type tns:InfectionAcquisitionFromInfectedHost
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:basicReproductionNumbers, tns:beta, tns:infectedHost, tns:infectiousPeriodDuration, tns:inoculationRate, tns:latentPeriodDuration, tns:transmissionProbabilities
Instance
 
<tns:infectionAcquisitionsFromInfectedHosts xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:infectedHost>{1,1}</tns:infectedHost>
  <tns:latentPeriodDuration>{1,1}</tns:latentPeriodDuration>
  <tns:infectiousPeriodDuration>{1,1}</tns:infectiousPeriodDuration>
  <tns:basicReproductionNumbers>{1,unbounded}</tns:basicReproductionNumbers>
  <tns:beta>{1,1}</tns:beta>
  <tns:transmissionProbabilities>{1,unbounded}</tns:transmissionProbabilities>
  <tns:inoculationRate>{0,1}</tns:inoculationRate>
</tns:infectionAcquisitionsFromInfectedHosts>
Source
 
<element name="infectionAcquisitionsFromInfectedHosts" type="tns:InfectionAcquisitionFromInfectedHost" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:InfectionAcquisitionFromInfectedHost / tns:infectedHost
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="infectedHost" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectionAcquisitionFromInfectedHost / tns:latentPeriodDuration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A duration of the time interval between the host acquiring an infection and the host bearing a contagiousness disposition during the same disease course within a population of hosts.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:latentPeriodDuration xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:latentPeriodDuration>
Source
 
<element name="latentPeriodDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000017" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A duration of the time interval between the host acquiring an infection and the host bearing a contagiousness disposition during the same disease course within a population of hosts.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectionAcquisitionFromInfectedHost / tns:infectiousPeriodDuration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A duration of the parts of an infection during which the host bears an infectious disposition in a population of hosts.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:infectiousPeriodDuration xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:infectiousPeriodDuration>
Source
 
<element name="infectiousPeriodDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000016" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A duration of the parts of an infection during which the host bears an infectious disposition in a population of hosts.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectionAcquisitionFromInfectedHost / tns:basicReproductionNumbers
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The average number of transmissions of an infectious agent from an infectious organism to a susceptible organism within a completely susceptible population.
Diagram
Diagram apollo.tmp#ReproductionNumber_exactValue apollo.tmp#ReproductionNumber_uncertainValue apollo.tmp#ReproductionNumber_referenceId apollo.tmp#ReproductionNumber
Type tns:ReproductionNumber
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:exactValue, tns:referenceId, tns:uncertainValue
Instance
 
<tns:basicReproductionNumbers xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:exactValue>{1,1}</tns:exactValue>
  <tns:uncertainValue>{1,1}</tns:uncertainValue>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:basicReproductionNumbers>
Source
 
<element name="basicReproductionNumbers" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000002" type="tns:ReproductionNumber" maxOccurs="unbounded" minOccurs="1">
  <annotation>
    <documentation>The average number of transmissions of an infectious agent from an infectious organism to a susceptible organism within a completely susceptible population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:ReproductionNumber / tns:exactValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="exactValue" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ReproductionNumber / tns:uncertainValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue
Type tns:UncertainValue
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="uncertainValue" type="tns:UncertainValue" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ReproductionNumber / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:InfectionAcquisitionFromInfectedHost / tns:beta
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:beta xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:beta>
Source
 
<element name="beta" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000191" type="tns:Rate" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectionAcquisitionFromInfectedHost / tns:transmissionProbabilities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TransmissionProbability_contactDefinition apollo.tmp#TransmissionProbability_contactDefinitionText apollo.tmp#TransmissionProbability_probability apollo.tmp#TransmissionProbability
Type tns:TransmissionProbability
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:contactDefinition, tns:contactDefinitionText, tns:probability
Instance
 
<tns:transmissionProbabilities xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:contactDefinition>{1,1}</tns:contactDefinition>
  <tns:contactDefinitionText>{0,1}</tns:contactDefinitionText>
  <tns:probability>{1,1}</tns:probability>
</tns:transmissionProbabilities>
Source
 
<element name="transmissionProbabilities" type="tns:TransmissionProbability" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:TransmissionProbability / tns:contactDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactDefinitionEnum
Type tns:ContactDefinitionEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration primaryContact
enumeration secondaryContact
enumeration infectedMosquitoBitesSusceptibleHuman
enumeration susceptibleMosquitoBitesInfectiousHuman
enumeration parenteralInjection
enumeration physicalContact
enumeration contactWithBodyFluids
enumeration assistedChildbirthOfInfectedMother
Source
 
<element name="contactDefinition" type="tns:ContactDefinitionEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TransmissionProbability / tns:contactDefinitionText
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="contactDefinitionText" type="token" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:TransmissionProbability / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:InfectionAcquisitionFromInfectedHost / tns:inoculationRate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:inoculationRate xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:inoculationRate>
Source
 
<element name="inoculationRate" type="tns:Rate" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Infection / tns:infectionAcquisitionsFromContaminatedThings
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionAcquisitionFromContaminatedAbioticThing_contaminatedAbioticThing apollo.tmp#InfectionAcquisitionFromContaminatedAbioticThing_transmissionProbability apollo.tmp#InfectionAcquisitionFromContaminatedAbioticThing
Type tns:InfectionAcquisitionFromContaminatedAbioticThing
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:contaminatedAbioticThing, tns:transmissionProbability
Instance
 
<tns:infectionAcquisitionsFromContaminatedThings xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:contaminatedAbioticThing>{1,1}</tns:contaminatedAbioticThing>
  <tns:transmissionProbability>{1,1}</tns:transmissionProbability>
</tns:infectionAcquisitionsFromContaminatedThings>
Source
 
<element name="infectionAcquisitionsFromContaminatedThings" type="tns:InfectionAcquisitionFromContaminatedAbioticThing" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:InfectionAcquisitionFromContaminatedAbioticThing / tns:contaminatedAbioticThing
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An abiotic ecosystem element that is participant in some biological contamination process.
Diagram
Diagram apollo.tmp#AbioticThingEnum
Type tns:AbioticThingEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration workplace
enumeration pigFarm
enumeration chickenFarm
enumeration household
enumeration community
enumeration ovipositionSite
enumeration syringe
enumeration bushMeat
Source
 
<element name="contaminatedAbioticThing" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000571" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An abiotic ecosystem element that is participant in some biological contamination process.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectionAcquisitionFromContaminatedAbioticThing / tns:transmissionProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:transmissionProbability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:transmissionProbability>
Source
 
<element name="transmissionProbability" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Infection / tns:InfectionAcquisitionsFromColonizedHosts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionAcquisitionFromColonizedHost_colonizedHost apollo.tmp#InfectionAcquisitionFromColonizedHost_transmissionProbability apollo.tmp#InfectionAcquisitionFromColonizedHost_beta apollo.tmp#InfectionAcquisitionFromColonizedHost
Type tns:InfectionAcquisitionFromColonizedHost
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:beta, tns:colonizedHost, tns:transmissionProbability
Instance
 
<tns:InfectionAcquisitionsFromColonizedHosts xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:colonizedHost>{1,1}</tns:colonizedHost>
  <tns:transmissionProbability>{1,1}</tns:transmissionProbability>
  <tns:beta>{1,1}</tns:beta>
</tns:InfectionAcquisitionsFromColonizedHosts>
Source
 
<element name="InfectionAcquisitionsFromColonizedHosts" type="tns:InfectionAcquisitionFromColonizedHost" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:InfectionAcquisitionFromColonizedHost / tns:colonizedHost
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="colonizedHost" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectionAcquisitionFromColonizedHost / tns:transmissionProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:transmissionProbability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:transmissionProbability>
Source
 
<element name="transmissionProbability" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectionAcquisitionFromColonizedHost / tns:beta
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that represents the rate that an infection moves from infected individuals to susceptible individuals in a population.
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="beta" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000191" type="string" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An information content entity that represents the rate that an infection moves from infected individuals to susceptible individuals in a population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:colonizations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Colonization_pathogen apollo.tmp#Colonization_host apollo.tmp#Colonization_colonizationDuration apollo.tmp#Colonization_probabilityOfInfectionOverTime apollo.tmp#Colonization_colonizationAcquisition apollo.tmp#Colonization
Type tns:Colonization
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:colonizationAcquisition, tns:colonizationDuration, tns:host, tns:pathogen, tns:probabilityOfInfectionOverTime
Instance
 
<tns:colonizations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:host>{1,1}</tns:host>
  <tns:colonizationDuration>{0,1}</tns:colonizationDuration>
  <tns:probabilityOfInfectionOverTime>{0,1}</tns:probabilityOfInfectionOverTime>
  <tns:colonizationAcquisition>{1,unbounded}</tns:colonizationAcquisition>
</tns:colonizations>
Source
 
<element name="colonizations" type="tns:Colonization" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Colonization / tns:pathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:pathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:pathogen>
Source
 
<element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Colonization / tns:host
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="host" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000238" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Colonization / tns:colonizationDuration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A duration that measures the temporal interval occupied by some colonization.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:colonizationDuration xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:colonizationDuration>
Source
 
<element name="colonizationDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000490" type="tns:Duration" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A duration that measures the temporal interval occupied by some colonization.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Colonization / tns:probabilityOfInfectionOverTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A conditional probability whose value is dependent upon the duration of some colonization or infection.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#ConditionalProbabilityDistribution_firstConditioningVariable apollo.tmp#ConditionalProbabilityDistribution
Type tns:ConditionalProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:firstConditioningVariable, tns:referenceId
Instance
 
<tns:probabilityOfInfectionOverTime xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:firstConditioningVariable>{1,1}</tns:firstConditioningVariable>
</tns:probabilityOfInfectionOverTime>
Source
 
<element name="probabilityOfInfectionOverTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000530" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A conditional probability whose value is dependent upon the duration of some colonization or infection.</documentation>
  </annotation>
</element>
[ top ]
Element tns:ConditionalProbabilityDistribution / tns:firstConditioningVariable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ConditioningVariable_name apollo.tmp#ConditioningVariable_categories apollo.tmp#ConditioningVariable
Type tns:ConditioningVariable
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:categories, tns:name
Instance
 
<tns:firstConditioningVariable xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:name>{1,1}</tns:name>
  <tns:categories>{1,unbounded}</tns:categories>
</tns:firstConditioningVariable>
Source
 
<element name="firstConditioningVariable" type="tns:ConditioningVariable" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ConditioningVariable / tns:name
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoricalVariableEnum
Type tns:CategoricalVariableEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration gender
enumeration biologicalSex
enumeration sex
enumeration ageRange
enumeration timeSpan
enumeration diseaseOutcome
enumeration sourceOfInfection
enumeration householdMedianIncome
enumeration maritalStatus
enumeration schoolingStatus
enumeration disabilityStatus
enumeration employmentStatus
enumeration place
enumeration measuredQuantityRange
enumeration location
Source
 
<element name="name" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0020000" type="tns:CategoricalVariableEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ConditioningVariable / tns:categories
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryValueNode_categoryDefinition apollo.tmp#CategoryValueNode_value apollo.tmp#CategoryValueNode_unconditionalProbabilityDistribution apollo.tmp#CategoryValueNode_nextCategoricalVariable apollo.tmp#CategoryValueNode
Type tns:CategoryValueNode
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:categoryDefinition, tns:nextCategoricalVariable, tns:unconditionalProbabilityDistribution, tns:value
Instance
 
<tns:categories xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:categoryDefinition>{1,1}</tns:categoryDefinition>
  <tns:value>{1,1}</tns:value>
  <tns:unconditionalProbabilityDistribution>{1,1}</tns:unconditionalProbabilityDistribution>
  <tns:nextCategoricalVariable>{1,1}</tns:nextCategoricalVariable>
</tns:categories>
Source
 
<element name="categories" type="tns:CategoryValueNode" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:CategoryValueNode / tns:categoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition
Type tns:CategoryDefinition
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="categoryDefinition" type="tns:CategoryDefinition" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CategoryValueNode / tns:value
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="value" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CategoryValueNode / tns:unconditionalProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution
Type tns:UnconditionalProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId
Instance
 
<tns:unconditionalProbabilityDistribution xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:unconditionalProbabilityDistribution>
Source
 
<element name="unconditionalProbabilityDistribution" type="tns:UnconditionalProbabilityDistribution" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CategoryValueNode / tns:nextCategoricalVariable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoricalVariableNode_name apollo.tmp#CategoricalVariableNode_categories apollo.tmp#CategoricalVariableNode
Type tns:CategoricalVariableNode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:categories, tns:name
Instance
 
<tns:nextCategoricalVariable xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:name>{1,1}</tns:name>
  <tns:categories>{1,unbounded}</tns:categories>
</tns:nextCategoricalVariable>
Source
 
<element name="nextCategoricalVariable" type="tns:CategoricalVariableNode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CategoricalVariableNode / tns:name
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoricalVariableEnum
Type tns:CategoricalVariableEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration gender
enumeration biologicalSex
enumeration sex
enumeration ageRange
enumeration timeSpan
enumeration diseaseOutcome
enumeration sourceOfInfection
enumeration householdMedianIncome
enumeration maritalStatus
enumeration schoolingStatus
enumeration disabilityStatus
enumeration employmentStatus
enumeration place
enumeration measuredQuantityRange
enumeration location
Source
 
<element name="name" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0020000" type="tns:CategoricalVariableEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CategoricalVariableNode / tns:categories
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryValueNode_categoryDefinition apollo.tmp#CategoryValueNode_value apollo.tmp#CategoryValueNode_unconditionalProbabilityDistribution apollo.tmp#CategoryValueNode_nextCategoricalVariable apollo.tmp#CategoryValueNode
Type tns:CategoryValueNode
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:categoryDefinition, tns:nextCategoricalVariable, tns:unconditionalProbabilityDistribution, tns:value
Instance
 
<tns:categories xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:categoryDefinition>{1,1}</tns:categoryDefinition>
  <tns:value>{1,1}</tns:value>
  <tns:unconditionalProbabilityDistribution>{1,1}</tns:unconditionalProbabilityDistribution>
  <tns:nextCategoricalVariable>{1,1}</tns:nextCategoricalVariable>
</tns:categories>
Source
 
<element name="categories" type="tns:CategoryValueNode" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Colonization / tns:colonizationAcquisition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ColonizationAcquisition_infectiousHostSource apollo.tmp#ColonizationAcquisition_contaminatedSource apollo.tmp#ColonizationAcquisition_colonizedHost apollo.tmp#ColonizationAcquisition_transmissionProbability apollo.tmp#ColonizationAcquisition_beta apollo.tmp#ColonizationAcquisition
Type tns:ColonizationAcquisition
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:beta, tns:colonizedHost, tns:contaminatedSource, tns:infectiousHostSource, tns:transmissionProbability
Instance
 
<tns:colonizationAcquisition xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:infectiousHostSource>{1,1}</tns:infectiousHostSource>
  <tns:contaminatedSource>{1,1}</tns:contaminatedSource>
  <tns:colonizedHost>{1,1}</tns:colonizedHost>
  <tns:transmissionProbability>{1,1}</tns:transmissionProbability>
  <tns:beta>{1,unbounded}</tns:beta>
</tns:colonizationAcquisition>
Source
 
<element name="colonizationAcquisition" type="tns:ColonizationAcquisition" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:ColonizationAcquisition / tns:infectiousHostSource
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="infectiousHostSource" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ColonizationAcquisition / tns:contaminatedSource
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#AbioticThingEnum
Type tns:AbioticThingEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration workplace
enumeration pigFarm
enumeration chickenFarm
enumeration household
enumeration community
enumeration ovipositionSite
enumeration syringe
enumeration bushMeat
Source
 
<element name="contaminatedSource" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ColonizationAcquisition / tns:colonizedHost
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="colonizedHost" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ColonizationAcquisition / tns:transmissionProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TransmissionProbability_contactDefinition apollo.tmp#TransmissionProbability_contactDefinitionText apollo.tmp#TransmissionProbability_probability apollo.tmp#TransmissionProbability
Type tns:TransmissionProbability
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:contactDefinition, tns:contactDefinitionText, tns:probability
Instance
 
<tns:transmissionProbability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:contactDefinition>{1,1}</tns:contactDefinition>
  <tns:contactDefinitionText>{0,1}</tns:contactDefinitionText>
  <tns:probability>{1,1}</tns:probability>
</tns:transmissionProbability>
Source
 
<element name="transmissionProbability" type="tns:TransmissionProbability" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ColonizationAcquisition / tns:beta
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:beta xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:beta>
Source
 
<element name="beta" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000191" type="tns:Rate" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:contaminations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Contamination_pathogen apollo.tmp#Contamination_abioticThing apollo.tmp#Contamination_contaminationDuration apollo.tmp#Contamination_contaminationAcquisition apollo.tmp#Contamination
Type tns:Contamination
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:abioticThing, tns:contaminationAcquisition, tns:contaminationDuration, tns:pathogen
Instance
 
<tns:contaminations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:abioticThing>{1,1}</tns:abioticThing>
  <tns:contaminationDuration>{1,1}</tns:contaminationDuration>
  <tns:contaminationAcquisition>{1,unbounded}</tns:contaminationAcquisition>
</tns:contaminations>
Source
 
<element name="contaminations" type="tns:Contamination" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Contamination / tns:pathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:pathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:pathogen>
Source
 
<element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Contamination / tns:abioticThing
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#AbioticThingEnum
Type tns:AbioticThingEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration workplace
enumeration pigFarm
enumeration chickenFarm
enumeration household
enumeration community
enumeration ovipositionSite
enumeration syringe
enumeration bushMeat
Source
 
<element name="abioticThing" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Contamination / tns:contaminationDuration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A duration that measures a temporal region occupied by some contamination.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:contaminationDuration xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:contaminationDuration>
Source
 
<element name="contaminationDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000505" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A duration that measures a temporal region occupied by some contamination.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Contamination / tns:contaminationAcquisition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContaminationAcquisition_infectiousHostSource apollo.tmp#ContaminationAcquisition_contaminatedSource apollo.tmp#ContaminationAcquisition_colonizedHostSource apollo.tmp#ContaminationAcquisition_transmissionProbability apollo.tmp#ContaminationAcquisition
Type tns:ContaminationAcquisition
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:colonizedHostSource, tns:contaminatedSource, tns:infectiousHostSource, tns:transmissionProbability
Instance
 
<tns:contaminationAcquisition xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:infectiousHostSource>{1,1}</tns:infectiousHostSource>
  <tns:contaminatedSource>{1,1}</tns:contaminatedSource>
  <tns:colonizedHostSource>{1,1}</tns:colonizedHostSource>
  <tns:transmissionProbability>{1,1}</tns:transmissionProbability>
</tns:contaminationAcquisition>
Source
 
<element name="contaminationAcquisition" type="tns:ContaminationAcquisition" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:ContaminationAcquisition / tns:infectiousHostSource
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="infectiousHostSource" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ContaminationAcquisition / tns:contaminatedSource
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="contaminatedSource" type="token" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ContaminationAcquisition / tns:colonizedHostSource
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="colonizedHostSource" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ContaminationAcquisition / tns:transmissionProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:transmissionProbability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:transmissionProbability>
Source
 
<element name="transmissionProbability" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:contaminatedThingCensuses
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#ContaminatedThingCensus_kindOfThing apollo.tmp#ContaminatedThingCensus_pathogen apollo.tmp#ContaminatedThingCensus_censusData apollo.tmp#ContaminatedThingCensus
Type tns:ContaminatedThingCensus
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:censusData, tns:description, tns:kindOfThing, tns:location, tns:pathogen, tns:referenceDate, tns:simulatorTime
Instance
 
<tns:contaminatedThingCensuses xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{1,1}</tns:location>
  <tns:simulatorTime>{1,1}</tns:simulatorTime>
  <tns:referenceDate>{0,1}</tns:referenceDate>
  <tns:kindOfThing>{1,1}</tns:kindOfThing>
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:censusData>{1,1}</tns:censusData>
</tns:contaminatedThingCensuses>
Source
 
<element name="contaminatedThingCensuses" type="tns:ContaminatedThingCensus" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:ContaminatedThingCensus / tns:kindOfThing
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#AbioticThingEnum
Type tns:AbioticThingEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration workplace
enumeration pigFarm
enumeration chickenFarm
enumeration household
enumeration community
enumeration ovipositionSite
enumeration syringe
enumeration bushMeat
Source
 
<element name="kindOfThing" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContaminatedThingCensus / tns:pathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:pathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:pathogen>
Source
 
<element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ContaminatedThingCensus / tns:censusData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#ContaminatedThingCensusData_fractionContaminated apollo.tmp#ContaminatedThingCensusData_exceptionSublocations apollo.tmp#ContaminatedThingCensusData
Type tns:ContaminatedThingCensusData
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:date, tns:exceptionSublocations, tns:fractionContaminated, tns:location
Instance
 
<tns:censusData xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:date>{0,1}</tns:date>
  <tns:location>{1,1}</tns:location>
  <tns:fractionContaminated>{1,1}</tns:fractionContaminated>
  <tns:exceptionSublocations>{0,unbounded}</tns:exceptionSublocations>
</tns:censusData>
Source
 
<element name="censusData" type="tns:ContaminatedThingCensusData" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ContaminatedThingCensusData / tns:fractionContaminated
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionContaminated" type="tns:Fraction" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContaminatedThingCensusData / tns:exceptionSublocations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#ContaminatedThingCensusData_fractionContaminated apollo.tmp#ContaminatedThingCensusData_exceptionSublocations apollo.tmp#ContaminatedThingCensusData
Type tns:ContaminatedThingCensusData
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:date, tns:exceptionSublocations, tns:fractionContaminated, tns:location
Instance
 
<tns:exceptionSublocations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:date>{0,1}</tns:date>
  <tns:location>{1,1}</tns:location>
  <tns:fractionContaminated>{1,1}</tns:fractionContaminated>
  <tns:exceptionSublocations>{0,unbounded}</tns:exceptionSublocations>
</tns:exceptionSublocations>
Source
 
<element name="exceptionSublocations" type="tns:ContaminatedThingCensusData" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:abioticThingCensuses
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#AbioticThingCensus_abioticThing apollo.tmp#AbioticThingCensus
Type tns:AbioticThingCensus
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:abioticThing, tns:description, tns:location, tns:referenceDate, tns:simulatorTime
Instance
 
<tns:abioticThingCensuses xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{1,1}</tns:location>
  <tns:simulatorTime>{1,1}</tns:simulatorTime>
  <tns:referenceDate>{0,1}</tns:referenceDate>
  <tns:abioticThing>{1,1}</tns:abioticThing>
</tns:abioticThingCensuses>
Source
 
<element name="abioticThingCensuses" type="tns:AbioticThingCensus" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:AbioticThingCensus / tns:abioticThing
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#AbioticThingEnum
Type tns:AbioticThingEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration workplace
enumeration pigFarm
enumeration chickenFarm
enumeration household
enumeration community
enumeration ovipositionSite
enumeration syringe
enumeration bushMeat
Source
 
<element name="abioticThing" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:infectiousDiseaseControlStrategies
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure
Type tns:InfectiousDiseaseControlMeasure
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Instance
 
<tns:infectiousDiseaseControlStrategies xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{0,1}</tns:location>
  <tns:controlMeasureStartTime>{1,unbounded}</tns:controlMeasureStartTime>
  <tns:controlMeasureStopTime>{0,unbounded}</tns:controlMeasureStopTime>
  <tns:controlMeasureResponseDelay>{1,1}</tns:controlMeasureResponseDelay>
  <tns:controlMeasureStandDownDelay>{1,1}</tns:controlMeasureStandDownDelay>
  <tns:logisticalSystems>{0,unbounded}</tns:logisticalSystems>
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>{0,unbounded}</tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>
</tns:infectiousDiseaseControlStrategies>
Source
 
<element name="infectiousDiseaseControlStrategies" type="tns:InfectiousDiseaseControlMeasure" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription apollo.tmp#Location
Type tns:Location
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Instance
 
<tns:location xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:locationDefinition>{1,1}</tns:locationDefinition>
  <tns:cartesianCircleLocationDefinition>{1,1}</tns:cartesianCircleLocationDefinition>
  <tns:textualDescription>{0,1}</tns:textualDescription>
</tns:location>
Source
 
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:controlMeasureStartTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies the start time of the implementation of a infectious disease control strategy.
Diagram
Diagram apollo.tmp#TriggerDefinition
Type tns:TriggerDefinition
Properties
content complex
minOccurs 1
maxOccurs unbounded
Source
 
<element name="controlMeasureStartTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000208" type="tns:TriggerDefinition" maxOccurs="unbounded" minOccurs="1">
  <annotation>
    <documentation>An information content entity that specifies the start time of the implementation of a infectious disease control strategy.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:controlMeasureStopTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies the time at which an infectious disease control strategy ends.
Diagram
Diagram apollo.tmp#TriggerDefinition
Type tns:TriggerDefinition
Properties
content complex
minOccurs 0
maxOccurs unbounded
Source
 
<element name="controlMeasureStopTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000260" type="tns:TriggerDefinition" maxOccurs="unbounded" minOccurs="0">
  <annotation>
    <documentation>An information content entity that specifies the time at which an infectious disease control strategy ends.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:controlMeasureResponseDelay
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum of the time interval from the decision to implement an infectious disease control strategy to the start of the control strategy expressed in number of time intervals.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:controlMeasureResponseDelay xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:controlMeasureResponseDelay>
Source
 
<element name="controlMeasureResponseDelay" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000133" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A measurement datum of the time interval from the decision to implement an infectious disease control strategy to the start of the control strategy expressed in number of time intervals.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:controlMeasureStandDownDelay
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum of the time interval from the decision to cease an infectious disease control strategy to the time the control strategy ends expressed in number of time intervals.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:controlMeasureStandDownDelay xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:controlMeasureStandDownDelay>
Source
 
<element name="controlMeasureStandDownDelay" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000263" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A measurement datum of the time interval from the decision to cease an infectious disease control strategy to the time the control strategy ends expressed in number of time intervals.</documentation>
  </annotation>
</element>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:logisticalSystems
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LogisticalSystem_product apollo.tmp#LogisticalSystem_logisticalSystemNodes apollo.tmp#LogisticalSystem
Type tns:LogisticalSystem
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:logisticalSystemNodes, tns:product
Instance
 
<tns:logisticalSystems xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:product>{1,1}</tns:product>
  <tns:logisticalSystemNodes>{1,unbounded}</tns:logisticalSystemNodes>
</tns:logisticalSystems>
Source
 
<element name="logisticalSystems" type="tns:LogisticalSystem" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:LogisticalSystem / tns:product
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="product" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:LogisticalSystem / tns:logisticalSystemNodes
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LogisticalSystemNode_description apollo.tmp#LogisticalSystemNode_capacitySchedule apollo.tmp#LogisticalSystemNode_outputSchedule apollo.tmp#LogisticalSystemNode_children apollo.tmp#LogisticalSystemNode
Type tns:LogisticalSystemNode
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:capacitySchedule, tns:children, tns:description, tns:outputSchedule
Instance
 
<tns:logisticalSystemNodes xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{0,1}</tns:description>
  <tns:capacitySchedule>{1,1}</tns:capacitySchedule>
  <tns:outputSchedule>{1,1}</tns:outputSchedule>
  <tns:children>{0,unbounded}</tns:children>
</tns:logisticalSystemNodes>
Source
 
<element name="logisticalSystemNodes" type="tns:LogisticalSystemNode" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:LogisticalSystemNode / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:LogisticalSystemNode / tns:capacitySchedule
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A plan specification that specifies the capacity to administer a particular treatment over a specific temporal interval in a specified geographical region.
Diagram
Diagram apollo.tmp#Schedule_unitOfMeasure apollo.tmp#Schedule_scheduleElements apollo.tmp#Schedule
Type tns:Schedule
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:scheduleElements, tns:unitOfMeasure
Instance
 
<tns:capacitySchedule xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfMeasure>{1,1}</tns:unitOfMeasure>
  <tns:scheduleElements>{1,unbounded}</tns:scheduleElements>
</tns:capacitySchedule>
Source
 
<element name="capacitySchedule" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000212" type="tns:Schedule" minOccurs="1" maxOccurs="1">
  <annotation>
    <documentation>A plan specification that specifies the capacity to administer a particular treatment over a specific temporal interval in a specified geographical region.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Schedule / tns:unitOfMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfMeasureEnum
Type tns:UnitOfMeasureEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Source
 
<element name="unitOfMeasure" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Schedule / tns:scheduleElements
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ScheduleElement_quantity apollo.tmp#ScheduleElement_dateTime apollo.tmp#ScheduleElement
Type tns:ScheduleElement
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:dateTime, tns:quantity
Instance
 
<tns:scheduleElements xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:quantity>{1,1}</tns:quantity>
  <tns:dateTime>{1,1}</tns:dateTime>
</tns:scheduleElements>
Source
 
<element name="scheduleElements" type="tns:ScheduleElement" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:ScheduleElement / tns:quantity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="quantity" type="positiveInteger" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ScheduleElement / tns:dateTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="dateTime" type="dateTime" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:LogisticalSystemNode / tns:outputSchedule
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Schedule_unitOfMeasure apollo.tmp#Schedule_scheduleElements apollo.tmp#Schedule
Type tns:Schedule
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:scheduleElements, tns:unitOfMeasure
Instance
 
<tns:outputSchedule xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfMeasure>{1,1}</tns:unitOfMeasure>
  <tns:scheduleElements>{1,unbounded}</tns:scheduleElements>
</tns:outputSchedule>
Source
 
<element name="outputSchedule" type="tns:Schedule" minOccurs="1" maxOccurs="1">
</element>
[ top ]
Element tns:LogisticalSystemNode / tns:children
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LogisticalSystemNode_description apollo.tmp#LogisticalSystemNode_capacitySchedule apollo.tmp#LogisticalSystemNode_outputSchedule apollo.tmp#LogisticalSystemNode_children apollo.tmp#LogisticalSystemNode
Type tns:LogisticalSystemNode
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:capacitySchedule, tns:children, tns:description, tns:outputSchedule
Instance
 
<tns:children xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{0,1}</tns:description>
  <tns:capacitySchedule>{1,1}</tns:capacitySchedule>
  <tns:outputSchedule>{1,1}</tns:outputSchedule>
  <tns:children>{0,unbounded}</tns:children>
</tns:children>
Source
 
<element name="children" type="tns:LogisticalSystemNode" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:InfectiousDiseaseControlMeasure / tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TemplatedInfectiousDiseaseControlMeasureUrlForSoftware_softwareIdentification apollo.tmp#TemplatedInfectiousDiseaseControlMeasureUrlForSoftware_controlMeasureTemplateUrl apollo.tmp#TemplatedInfectiousDiseaseControlMeasureUrlForSoftware
Type tns:TemplatedInfectiousDiseaseControlMeasureUrlForSoftware
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:controlMeasureTemplateUrl, tns:softwareIdentification
Instance
 
<tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:softwareIdentification>{1,unbounded}</tns:softwareIdentification>
  <tns:controlMeasureTemplateUrl>{1,1}</tns:controlMeasureTemplateUrl>
</tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>
Source
 
<element name="templatedInfectiousDiseaseControlMeasureUrlsForSoftware" type="tns:TemplatedInfectiousDiseaseControlMeasureUrlForSoftware" minOccurs="0" maxOccurs="unbounded"/>
[ top ]
Element tns:TemplatedInfectiousDiseaseControlMeasureUrlForSoftware / tns:softwareIdentification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SoftwareIdentification_softwareDeveloper apollo.tmp#SoftwareIdentification_softwareName apollo.tmp#SoftwareIdentification_softwareVersion apollo.tmp#SoftwareIdentification_softwareType apollo.tmp#SoftwareIdentification_softwareLicenseIdentification apollo.tmp#SoftwareIdentification_customIdentifier apollo.tmp#SoftwareIdentification
Type tns:SoftwareIdentification
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:customIdentifier, tns:softwareDeveloper, tns:softwareLicenseIdentification, tns:softwareName, tns:softwareType, tns:softwareVersion
Instance
 
<tns:softwareIdentification xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:softwareDeveloper>{1,1}</tns:softwareDeveloper>
  <tns:softwareName>{1,1}</tns:softwareName>
  <tns:softwareVersion>{1,1}</tns:softwareVersion>
  <tns:softwareType>{1,1}</tns:softwareType>
  <tns:softwareLicenseIdentification>{0,1}</tns:softwareLicenseIdentification>
  <tns:customIdentifier>{0,1}</tns:customIdentifier>
</tns:softwareIdentification>
Source
 
<element name="softwareIdentification" type="tns:SoftwareIdentification" minOccurs="1" maxOccurs="unbounded"/>
[ top ]
Element tns:SoftwareIdentification / tns:softwareDeveloper
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to the legal person that creates and maintains software.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="softwareDeveloper" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000105" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that refers to the legal person that creates and maintains software.</documentation>
  </annotation>
</element>
[ top ]
Element tns:SoftwareIdentification / tns:softwareName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to all version of a specific software.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="softwareName" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000109" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that refers to all version of a specific software.</documentation>
  </annotation>
</element>
[ top ]
Element tns:SoftwareIdentification / tns:softwareVersion
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that, as part of a complete software identifier, refers to one specific version of the software.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="softwareVersion" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000108" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that, as part of a complete software identifier, refers to one specific version of the software.</documentation>
  </annotation>
</element>
[ top ]
Element tns:SoftwareIdentification / tns:softwareType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloSoftwareTypeEnum
Type tns:ApolloSoftwareTypeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration simulator
enumeration batchSimulator
enumeration visualizer
enumeration syntheticPopulationGenerator
enumeration translator
enumeration data
enumeration broker
enumeration endUserApplication
enumeration runManager
enumeration queryService
Source
 
<element name="softwareType" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000591" type="tns:ApolloSoftwareTypeEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SoftwareIdentification / tns:softwareLicenseIdentification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SoftwareLicenseIdentification_licenseLocation apollo.tmp#SoftwareLicenseIdentification_licenseVersion apollo.tmp#SoftwareLicenseIdentification_licenseName apollo.tmp#SoftwareLicenseIdentification_attributionNotice apollo.tmp#SoftwareLicenseIdentification
Type tns:SoftwareLicenseIdentification
Properties
content complex
minOccurs 0
Model
Children tns:attributionNotice, tns:licenseLocation, tns:licenseName, tns:licenseVersion
Instance
 
<tns:softwareLicenseIdentification xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:licenseLocation>{1,1}</tns:licenseLocation>
  <tns:licenseVersion>{1,1}</tns:licenseVersion>
  <tns:licenseName>{1,1}</tns:licenseName>
  <tns:attributionNotice>{1,1}</tns:attributionNotice>
</tns:softwareLicenseIdentification>
Source
 
<element name="softwareLicenseIdentification" type="tns:SoftwareLicenseIdentification" minOccurs="0"/>
[ top ]
Element tns:SoftwareLicenseIdentification / tns:licenseLocation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A unique resource locator that constitutes a reference to some software license.
Diagram
Diagram
Type anyURI
Properties
content simple
Source
 
<element name="licenseLocation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000539" type="anyURI">
  <annotation>
    <documentation>A unique resource locator that constitutes a reference to some software license.</documentation>
  </annotation>
</element>
[ top ]
Element tns:SoftwareLicenseIdentification / tns:licenseVersion
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that, as part of a complete software license identifier, refers to one specific version of the software license.
Diagram
Diagram
Type token
Properties
content simple
Source
 
<element name="licenseVersion" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000537" type="token">
  <annotation>
    <documentation>An identifier that, as part of a complete software license identifier, refers to one specific version of the software license.</documentation>
  </annotation>
</element>
[ top ]
Element tns:SoftwareLicenseIdentification / tns:licenseName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to all versions of a specific software license.
Diagram
Diagram
Type token
Properties
content simple
Source
 
<element name="licenseName" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000538" type="token">
  <annotation>
    <documentation>An identifier that refers to all versions of a specific software license.</documentation>
  </annotation>
</element>
[ top ]
Element tns:SoftwareLicenseIdentification / tns:attributionNotice
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="attributionNotice" type="string"/>
[ top ]
Element tns:SoftwareIdentification / tns:customIdentifier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
Source
 
<element name="customIdentifier" type="token" minOccurs="0"/>
[ top ]
Element tns:TemplatedInfectiousDiseaseControlMeasureUrlForSoftware / tns:controlMeasureTemplateUrl
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type anyURI
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="controlMeasureTemplateUrl" type="anyURI" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:scenarioCartesianOrigin
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ScenarioCartesianOrigin_cartesianReferenceLongitude apollo.tmp#ScenarioCartesianOrigin_cartesianReferenceLatitude apollo.tmp#ScenarioCartesianOrigin_cartesianReferenceAltitude apollo.tmp#ScenarioCartesianOrigin
Type tns:ScenarioCartesianOrigin
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:cartesianReferenceAltitude, tns:cartesianReferenceLatitude, tns:cartesianReferenceLongitude
Instance
 
<tns:scenarioCartesianOrigin xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:cartesianReferenceLongitude>{1,1}</tns:cartesianReferenceLongitude>
  <tns:cartesianReferenceLatitude>{1,1}</tns:cartesianReferenceLatitude>
  <tns:cartesianReferenceAltitude>{1,1}</tns:cartesianReferenceAltitude>
</tns:scenarioCartesianOrigin>
Source
 
<element name="scenarioCartesianOrigin" type="tns:ScenarioCartesianOrigin" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:ScenarioCartesianOrigin / tns:cartesianReferenceLongitude
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Longitude
Type tns:Longitude
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 180
minInclusive -180
Source
 
<element name="cartesianReferenceLongitude" type="tns:Longitude" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ScenarioCartesianOrigin / tns:cartesianReferenceLatitude
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Latitude
Type tns:Latitude
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 90
minInclusive -90
Source
 
<element name="cartesianReferenceLatitude" type="tns:Latitude" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ScenarioCartesianOrigin / tns:cartesianReferenceAltitude
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:cartesianReferenceAltitude xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:cartesianReferenceAltitude>
Source
 
<element name="cartesianReferenceAltitude" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseScenario / tns:nonApolloParameters
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonApolloParameter_description apollo.tmp#NonApolloParameter_parameterName apollo.tmp#NonApolloParameter_parameterIntValue apollo.tmp#NonApolloParameter_parameterFloatValue apollo.tmp#NonApolloParameter_parameterTokenValue apollo.tmp#NonApolloParameter
Type tns:NonApolloParameter
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:description, tns:parameterFloatValue, tns:parameterIntValue, tns:parameterName, tns:parameterTokenValue
Instance
 
<tns:nonApolloParameters xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:parameterName>{1,1}</tns:parameterName>
  <tns:parameterIntValue>{1,1}</tns:parameterIntValue>
  <tns:parameterFloatValue>{1,1}</tns:parameterFloatValue>
  <tns:parameterTokenValue>{1,1}</tns:parameterTokenValue>
</tns:nonApolloParameters>
Source
 
<element name="nonApolloParameters" type="tns:NonApolloParameter" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:NonApolloParameter / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A textual entity that specifies characteristics of some entity.
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A textual entity that specifies characteristics of some entity.</documentation>
  </annotation>
</element>
[ top ]
Element tns:NonApolloParameter / tns:parameterName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="parameterName" type="string" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:NonApolloParameter / tns:parameterIntValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type int
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="parameterIntValue" type="int" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:NonApolloParameter / tns:parameterFloatValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="parameterFloatValue" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:NonApolloParameter / tns:parameterTokenValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="parameterTokenValue" type="token" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:VariableCategoryValueTree / tns:nVariables
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="nVariables" type="positiveInteger" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:VariableCategoryValueTree / tns:rootVariableNode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoricalVariableNode_name apollo.tmp#CategoricalVariableNode_categories apollo.tmp#CategoricalVariableNode
Type tns:CategoricalVariableNode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:categories, tns:name
Instance
 
<tns:rootVariableNode xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:name>{1,1}</tns:name>
  <tns:categories>{1,unbounded}</tns:categories>
</tns:rootVariableNode>
Source
 
<element name="rootVariableNode" type="tns:CategoricalVariableNode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:UncertainDuration / tns:uncertainValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue
Type tns:UncertainValue
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="uncertainValue" type="tns:UncertainValue" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DiscreteNonparametricProbabilityDistribution / tns:probabilityValuePairs
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ProbabilityValuePair_value apollo.tmp#ProbabilityValuePair_probability apollo.tmp#ProbabilityValuePair
Type tns:ProbabilityValuePair
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:probability, tns:value
Instance
 
<tns:probabilityValuePairs xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:value>{1,1}</tns:value>
  <tns:probability>{1,1}</tns:probability>
</tns:probabilityValuePairs>
Source
 
<element name="probabilityValuePairs" type="tns:ProbabilityValuePair" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:ProbabilityValuePair / tns:value
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="value" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ProbabilityValuePair / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:LogNormalDistribution / tns:mean
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that is produced as the output of an averaging data transformation and represents the average value of the input data.
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A data item that is produced as the output of an averaging data transformation and represents the average value of the input data.</documentation>
  </annotation>
</element>
[ top ]
Element tns:LogNormalDistribution / tns:standardDeviation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that specifies the dispersion of values around some parameter in a set of data, and whose values are standardized to express the same unit of measure as the parameter of interest.
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="standardDeviation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000448" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A data item that specifies the dispersion of values around some parameter in a set of data, and whose values are standardized to express the same unit of measure as the parameter of interest.</documentation>
  </annotation>
</element>
[ top ]
Element tns:LogNormalDistribution / tns:shiftRight
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="shiftRight" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:LogNormalDistribution / tns:cutTailAt
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An action specification that delineates some minimum value or maximum value for some test statistic within a continuous probability distribution that is meant to serve as a lower bound or upper bound, respectively, for some population or sample of interest.
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="cutTailAt" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000481" type="tns:PositiveDouble" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An action specification that delineates some minimum value or maximum value for some test statistic within a continuous probability distribution that is meant to serve as a lower bound or upper bound, respectively, for some population or sample of interest.</documentation>
  </annotation>
</element>
[ top ]
Element tns:NormalDistribution / tns:mean
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:NormalDistribution / tns:standardDeviation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="standardDeviation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000448" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:NormalDistribution / tns:shiftRight
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="shiftRight" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:NormalDistribution / tns:cutTailAt
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="cutTailAt" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000481" type="tns:PositiveDouble" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:GammaDistribution / tns:k-shape
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="k-shape" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:GammaDistribution / tns:theta-scale
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="theta-scale" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:GammaDistribution / tns:shiftRight
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="shiftRight" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:GammaDistribution / tns:cutTailAt
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="cutTailAt" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000481" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:WeibullDistribution / tns:k-shape
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="k-shape" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:WeibullDistribution / tns:lambda-scale
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="lambda-scale" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:WeibullDistribution / tns:shiftRight
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="shiftRight" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:WeibullDistribution / tns:cutTailAt
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="cutTailAt" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000481" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ContinuousUniformDistribution / tns:minimumValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that specifies the smallest numerical value in a data set of scalar measurement data items.
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="minimumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000432" type="double" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A data item that specifies the smallest numerical value in a data set of scalar measurement data items.</documentation>
  </annotation>
</element>
[ top ]
Element tns:ContinuousUniformDistribution / tns:maximumValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that specifies the largest numerical value in a data set of scalar measurement data itmes.
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="maximumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000433" type="double" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A data item that specifies the largest numerical value in a data set of scalar measurement data itmes.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MeanWithConfidenceInterval / tns:mean
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:MeanWithConfidenceInterval / tns:lowerBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that delimits an interval data structure based on some value that is less than or equal to all other values within that data structure.
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="lowerBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000436" type="double" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An information content entity that delimits an interval data structure based on some value that is less than or equal to all other values within that data structure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MeanWithConfidenceInterval / tns:upperBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that delimits an interval data structure based on some value that is greater than or equal to all other values within that data structure.
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="upperBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000447" type="double" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An information content entity that delimits an interval data structure based on some value that is greater than or equal to all other values within that data structure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MeanWithConfidenceInterval / tns:confidence
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A predicted data item that estimates how reliable some method of statistical inference will be at estimating the population parameter of interest.
Diagram
Diagram apollo.tmp#Percent
Type tns:Percent
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="confidence" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000434" type="tns:Percent" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A predicted data item that estimates how reliable some method of statistical inference will be at estimating the population parameter of interest.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MeanWithConfidenceInterval / tns:sampleSize
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
statistical sample size is a count evaluating the number of individual experimental units
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="sampleSize" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000088" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>statistical sample size is a count evaluating the number of individual experimental units</documentation>
  </annotation>
</element>
[ top ]
Element tns:MeanWithStandardDeviation / tns:mean
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:MeanWithStandardDeviation / tns:standardDeviation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="standardDeviation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000448" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:MeanWithStandardDeviation / tns:sampleSize
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="sampleSize" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000088" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:MeanMedianMinimumMaximum / tns:mean
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:MeanMedianMinimumMaximum / tns:median
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that is produced as the output of a center calculation data transformation and represents the center value of the input data.
Diagram
Diagram
Type double
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="median" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000674" type="double" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A data item that is produced as the output of a center calculation data transformation and represents the center value of the input data.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MeanMedianMinimumMaximum / tns:minimumValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="minimumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000432" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:MeanMedianMinimumMaximum / tns:maximumValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="maximumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000433" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:MeanMedianMinimumMaximum / tns:sampleSize
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="sampleSize" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000088" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:MosquitoReproduction / tns:gonotrophicPeriodDuration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A time measurement datum of the length of the temporal interval occupied by a gonotropic period.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:gonotrophicPeriodDuration xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:gonotrophicPeriodDuration>
Source
 
<element name="gonotrophicPeriodDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000313" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A time measurement datum of the length of the temporal interval occupied by a gonotropic period.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoReproduction / tns:eggsPerBrood
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An average value that specifies the number of eggs produced during one reproductive cycle for each individual female within a population.
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="eggsPerBrood" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000453" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An average value that specifies the number of eggs produced during one reproductive cycle for each individual female within a population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoReproduction / tns:minimumEggsPerOviposition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator action specification that specifies the minimum number of eggs that any simulated female mosquito will oviposit during a gonotrophic cycle.
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="minimumEggsPerOviposition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000471" type="positiveInteger" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An epidemic simulator action specification that specifies the minimum number of eggs that any simulated female mosquito will oviposit during a gonotrophic cycle.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoReproduction / tns:ageDependentFecundityReduction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A rate measurement datum that measures the percentage decrease per unit time (typically per day) in the number of offspring to which a female mosquito passes an infection with a particular pathogen (e.g., Wolbachia).
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:ageDependentFecundityReduction xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:ageDependentFecundityReduction>
Source
 
<element name="ageDependentFecundityReduction" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000472" type="tns:Rate" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A rate measurement datum that measures the percentage decrease per unit time (typically per day) in the number of offspring to which a female mosquito passes an infection with a particular pathogen (e.g., Wolbachia).</documentation>
  </annotation>
</element>
[ top ]
Element tns:ClaraDensityDependentMortalityFunction / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:ClaraDensityDependentMortalityFunction / tns:omega
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="omega" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ClaraDensityDependentMortalityFunction / tns:sigma
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="sigma" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:MosquitoBehavior / tns:biteProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A predicted data item that specifies the frequency with which a female mosquito feeds on or probes the host given an interaction between the mosquito and the host that brings them within a certain proximity (the bite radius).
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:biteProbability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:biteProbability>
Source
 
<element name="biteProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000457" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A predicted data item that specifies the frequency with which a female mosquito feeds on or probes the host given an interaction between the mosquito and the host that brings them within a certain proximity (the bite radius).</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoBehavior / tns:biteRadius
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A length measurement datum that specifies the radius of a circle, which is centered at a vector organism, for which there is a certain probability that the vector organism will bite a susceptible host.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:biteRadius xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:biteRadius>
Source
 
<element name="biteRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000440" type="tns:Distance" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A length measurement datum that specifies the radius of a circle, which is centered at a vector organism, for which there is a certain probability that the vector organism will bite a susceptible host.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoBehavior / tns:timeBetweenBites
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A duration that measures the temporal interval between some vector bite n and some vector bite n+1.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:timeBetweenBites xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:timeBetweenBites>
Source
 
<element name="timeBetweenBites" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000441" type="tns:Duration" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A duration that measures the temporal interval between some vector bite n and some vector bite n+1.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoBehavior / tns:migrationSpeed
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A rate measurement datum of that divides the total distance traveled during some migration process by the duration of the temporal interval occupied by that process.
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:migrationSpeed xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:migrationSpeed>
Source
 
<element name="migrationSpeed" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000442" type="tns:Rate" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A rate measurement datum of that divides the total distance traveled during some migration process by the duration of the temporal interval occupied by that process.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoBehavior / tns:shadeAffinity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies the probability that a given mosquito will realize a disposition to seek out a shaded environment when it isn't seeking a host or ovisite.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="shadeAffinity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000443" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An information content entity that specifies the probability that a given mosquito will realize a disposition to seek out a shaded environment when it isn't seeking a host or ovisite.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoBehavior / tns:maleMatingRadius
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A length measurement datum that specifies the radius of a circle, which is centered at a male vector organism, for which there is some probability that it will mate with a female mosquito.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:maleMatingRadius xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:maleMatingRadius>
Source
 
<element name="maleMatingRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000458" type="tns:Distance" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A length measurement datum that specifies the radius of a circle, which is centered at a male vector organism, for which there is some probability that it will mate with a female mosquito.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoBehavior / tns:matingProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies the probability that some male mosquito and some female mosquito within a certain distance of each other realize some disposition to reproduce with one another.
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="matingProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000450" type="tns:Probability" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An information content entity that specifies the probability that some male mosquito and some female mosquito within a certain distance of each other realize some disposition to reproduce with one another.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MosquitoBehavior / tns:straightTravelAfterOviposit
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator action specification that specifies the linear distance a female mosquito will travel to find the next oviposition site after depositing some of its eggs at the previous one.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:straightTravelAfterOviposit xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:straightTravelAfterOviposit>
Source
 
<element name="straightTravelAfterOviposit" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000452" type="tns:Distance" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An epidemic simulator action specification that specifies the linear distance a female mosquito will travel to find the next oviposition site after depositing some of its eggs at the previous one.</documentation>
  </annotation>
</element>
[ top ]
Element tns:HumanBehavior / tns:speedOfMovement
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A rate measurement datum that specifies the ratio of distance travelled during a movement process to the duration of the time interval occupied by the process.
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:speedOfMovement xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:speedOfMovement>
Source
 
<element name="speedOfMovement" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000444" type="tns:Rate" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A rate measurement datum that specifies the ratio of distance travelled during a movement process to the duration of the time interval occupied by the process.</documentation>
  </annotation>
</element>
[ top ]
Element tns:HumanBehavior / tns:buildingAffinity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies the probability that a given mosquito realizes some disposition to seek out a building if it isn't seeking a host or ovisite.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="buildingAffinity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000451" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An information content entity that specifies the probability that a given mosquito realizes some disposition to seek out a building if it isn't seeking a host or ovisite.</documentation>
  </annotation>
</element>
[ top ]
Element tns:lInfection / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="location" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:lInfection / tns:timePeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Interval_startBoundaryDefinition apollo.tmp#Interval_endBoundaryDefinition apollo.tmp#Interval_duration apollo.tmp#Interval_readableTitle apollo.tmp#Interval_referenceId apollo.tmp#Interval
Type tns:Interval
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:duration, tns:endBoundaryDefinition, tns:readableTitle, tns:referenceId, tns:startBoundaryDefinition
Instance
 
<tns:timePeriod xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:startBoundaryDefinition>{1,1}</tns:startBoundaryDefinition>
  <tns:endBoundaryDefinition>{1,1}</tns:endBoundaryDefinition>
  <tns:duration>{1,1}</tns:duration>
  <tns:readableTitle>{0,1}</tns:readableTitle>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:timePeriod>
Source
 
<element name="timePeriod" type="tns:Interval" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:lInfectiousDisease / tns:coosalPathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:coosalPathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:coosalPathogen>
Source
 
<element name="coosalPathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:lInfectiousDisease / tns:hoostSpecies
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="hoostSpecies" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:lContamination / tns:XXX
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:XXX xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:XXX>
Source
 
<element name="XXX" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationTreatmentCensusData / tns:treatmentCensusDataCells
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PopulationTreatmentCensusDataCell_ageRange apollo.tmp#PopulationTreatmentCensusDataCell_sex apollo.tmp#PopulationTreatmentCensusDataCell_treatmentState apollo.tmp#PopulationTreatmentCensusDataCell_fractionInTreatmentState apollo.tmp#PopulationTreatmentCensusDataCell
Type tns:PopulationTreatmentCensusDataCell
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:ageRange, tns:fractionInTreatmentState, tns:sex, tns:treatmentState
Instance
 
<tns:treatmentCensusDataCells xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ageRange>{0,1}</tns:ageRange>
  <tns:sex>{0,1}</tns:sex>
  <tns:treatmentState>{1,1}</tns:treatmentState>
  <tns:fractionInTreatmentState>{1,1}</tns:fractionInTreatmentState>
</tns:treatmentCensusDataCells>
Source
 
<element name="treatmentCensusDataCells" type="tns:PopulationTreatmentCensusDataCell" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:PopulationTreatmentCensusDataCell / tns:ageRange
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#AgeRangeCategoryDefinition_label apollo.tmp#AgeRangeCategoryDefinition_unitOfTimeForLowerBound apollo.tmp#AgeRangeCategoryDefinition_lowerBound apollo.tmp#AgeRangeCategoryDefinition_unitOfTimeForUpperBound apollo.tmp#AgeRangeCategoryDefinition_upperBound apollo.tmp#AgeRangeCategoryDefinition
Type tns:AgeRangeCategoryDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:label, tns:lowerBound, tns:unitOfTimeForLowerBound, tns:unitOfTimeForUpperBound, tns:upperBound
Instance
 
<tns:ageRange xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:label>{0,1}</tns:label>
  <tns:unitOfTimeForLowerBound>{1,1}</tns:unitOfTimeForLowerBound>
  <tns:lowerBound>{1,1}</tns:lowerBound>
  <tns:unitOfTimeForUpperBound>{1,1}</tns:unitOfTimeForUpperBound>
  <tns:upperBound>{1,1}</tns:upperBound>
</tns:ageRange>
Source
 
<element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:PopulationTreatmentCensusDataCell / tns:sex
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GenderEnum
Type tns:GenderEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration M
enumeration F
enumeration U
Source
 
<element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:PopulationTreatmentCensusDataCell / tns:treatmentState
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentStateEnum
Type tns:TreatmentStateEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration treated
enumeration not_treated
Source
 
<element name="treatmentState" type="tns:TreatmentStateEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PopulationTreatmentCensusDataCell / tns:fractionInTreatmentState
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionInTreatmentState" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationTreatmentCensusData / tns:exceptionSubpopulations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#PopulationTreatmentCensusData_treatmentCensusDataCells apollo.tmp#PopulationTreatmentCensusData_exceptionSubpopulations apollo.tmp#PopulationTreatmentCensusData
Type tns:PopulationTreatmentCensusData
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:date, tns:exceptionSubpopulations, tns:location, tns:treatmentCensusDataCells
Instance
 
<tns:exceptionSubpopulations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:date>{0,1}</tns:date>
  <tns:location>{1,1}</tns:location>
  <tns:treatmentCensusDataCells>{1,unbounded}</tns:treatmentCensusDataCells>
  <tns:exceptionSubpopulations>{0,unbounded}</tns:exceptionSubpopulations>
</tns:exceptionSubpopulations>
Source
 
<element name="exceptionSubpopulations" type="tns:PopulationTreatmentCensusData" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:PopulationTreatmentCensus / tns:populationSpecies
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A taxonomy identifier curated by the National Center for Biotechnology Information that specifies the taxonomic classification of some population of organisms.
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="populationSpecies" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000491" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A taxonomy identifier curated by the National Center for Biotechnology Information that specifies the taxonomic classification of some population of organisms.</documentation>
  </annotation>
</element>
[ top ]
Element tns:PopulationTreatmentCensus / tns:treatmentCensusData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#PopulationTreatmentCensusData_treatmentCensusDataCells apollo.tmp#PopulationTreatmentCensusData_exceptionSubpopulations apollo.tmp#PopulationTreatmentCensusData
Type tns:PopulationTreatmentCensusData
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:date, tns:exceptionSubpopulations, tns:location, tns:treatmentCensusDataCells
Instance
 
<tns:treatmentCensusData xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:date>{0,1}</tns:date>
  <tns:location>{1,1}</tns:location>
  <tns:treatmentCensusDataCells>{1,unbounded}</tns:treatmentCensusDataCells>
  <tns:exceptionSubpopulations>{0,unbounded}</tns:exceptionSubpopulations>
</tns:treatmentCensusData>
Source
 
<element name="treatmentCensusData" type="tns:PopulationTreatmentCensusData" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:OvipositionSiteCensus / tns:breteauIndex
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The average number of water containers testing positive for the presence of a particular mosquito species, typically Aedes aegyptii, per 100 households in the geographical region under surveillance.
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="breteauIndex" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000311" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>The average number of water containers testing positive for the presence of a particular mosquito species, typically Aedes aegyptii, per 100 households in the geographical region under surveillance.</documentation>
  </annotation>
</element>
[ top ]
Element tns:OvipositionSiteCensus / tns:carryingCapacityPerHouse
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator action specification that specifies the maximum number of larvae that can exist across all ovisites in a given house.
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="carryingCapacityPerHouse" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000473" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An epidemic simulator action specification that specifies the maximum number of larvae that can exist across all ovisites in a given house.</documentation>
  </annotation>
</element>
[ top ]
Element tns:OvipositionSiteCensus / tns:heterogenousCarryingCapacity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A conditional specification for some epidemic simulator that is triggered by a Boolean value that, if true, specifies that there is a non-uniform distribution of oviposition site carrying capacities in a simulated vector population.
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="heterogenousCarryingCapacity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000463" type="boolean" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A conditional specification for some epidemic simulator that is triggered by a Boolean value that, if true, specifies that there is a non-uniform distribution of oviposition site carrying capacities in a simulated vector population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:OvipositionSiteCensus / tns:ratioOfOutdoorToIndoorOvisites
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that specifies, as a ratio, the total count of oviposition sites located externally to all places in a geographic region relative to the total count of oviposition sites located internally to some place in that geographic region.
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="ratioOfOutdoorToIndoorOvisites" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000446" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A data item that specifies, as a ratio, the total count of oviposition sites located externally to all places in a geographic region relative to the total count of oviposition sites located internally to some place in that geographic region.</documentation>
  </annotation>
</element>
[ top ]
Element tns:OvipositionSiteCensus / tns:maximumRatioOfOutdoorCarryingCapacityToIndoor
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="maximumRatioOfOutdoorCarryingCapacityToIndoor" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:TemporalTriggerDefinition / tns:timeScale
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that designates a scale according to which time is measured (e.g., Gregorian Calendar).
Diagram
Diagram apollo.tmp#TimeScaleEnum
Type tns:TimeScaleEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration simulatorTimeScale
enumeration decisionTimeScale
enumeration controlMeasureTimeScale
enumeration individualTreatmentTimeScale
enumeration epidemicTimeScale
enumeration gregorianCalendar
Source
 
<element name="timeScale" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000268" type="tns:TimeScaleEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that designates a scale according to which time is measured (e.g., Gregorian Calendar).</documentation>
  </annotation>
</element>
[ top ]
Element tns:TemporalTriggerDefinition / tns:timeSinceTimeScaleZero
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
the duration of time that has elapsed from the zero reference point to a later time on the time scale
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration apollo.tmp#FixedDuration_value apollo.tmp#FixedDuration
Type tns:FixedDuration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime, tns:value
Instance
 
<tns:timeSinceTimeScaleZero xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:value>{1,1}</tns:value>
</tns:timeSinceTimeScaleZero>
Source
 
<element name="timeSinceTimeScaleZero" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000272" type="tns:FixedDuration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>the duration of time that has elapsed from the zero reference point to a later time on the time scale</documentation>
  </annotation>
</element>
[ top ]
Element tns:DiseaseSurveillanceTriggerDefinition / tns:reactiveControlMeasureTest
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="reactiveControlMeasureTest" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000130" type="token" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseSurveillanceTriggerDefinition / tns:reactiveControlMeasureThreshold
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that specifies the fraction of the population known to have undergone a specific event that results in starting or stopping an infectious disease control strategy.
Diagram
Diagram
Type int
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="reactiveControlMeasureThreshold" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000131" type="int" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A data item that specifies the fraction of the population known to have undergone a specific event that results in starting or stopping an infectious disease control strategy.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DiseaseSurveillanceTriggerDefinition / tns:unitOfMeasureForThreshold
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A unit of measure for a threshold in a reactive infectious disease control strategy.
Diagram
Diagram apollo.tmp#UnitOfMeasureEnum
Type tns:UnitOfMeasureEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Source
 
<element name="unitOfMeasureForThreshold" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000295" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A unit of measure for a threshold in a reactive infectious disease control strategy.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DiseaseSurveillanceTriggerDefinition / tns:reactiveControlMeasureOperator
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator action specification that specifies the comparison operation to use to determine whether some value, relative to a threshold, is one that should trigger the implementation of a control measure.
Diagram
Diagram apollo.tmp#OperatorEnum
Type tns:OperatorEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration less_than_or_equal
enumeration greater_than_or_equal
Source
 
<element name="reactiveControlMeasureOperator" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000474" type="tns:OperatorEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An epidemic simulator action specification that specifies the comparison operation to use to determine whether some value, relative to a threshold, is one that should trigger the implementation of a control measure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DiseaseSurveillanceTriggerDefinition / tns:diseaseSurveillanceCapability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseSurveillanceCapability_location apollo.tmp#DiseaseSurveillanceCapability_pathogen apollo.tmp#DiseaseSurveillanceCapability_speciesOfCase apollo.tmp#DiseaseSurveillanceCapability_caseDefinition apollo.tmp#DiseaseSurveillanceCapability_sensitivityOfCaseDetection apollo.tmp#DiseaseSurveillanceCapability_specificityOfCaseDetection apollo.tmp#DiseaseSurveillanceCapability_timeDelayOfCaseDetection apollo.tmp#DiseaseSurveillanceCapability
Type tns:DiseaseSurveillanceCapability
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:caseDefinition, tns:location, tns:pathogen, tns:sensitivityOfCaseDetection, tns:speciesOfCase, tns:specificityOfCaseDetection, tns:timeDelayOfCaseDetection
Instance
 
<tns:diseaseSurveillanceCapability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:location>{1,1}</tns:location>
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:speciesOfCase>{1,1}</tns:speciesOfCase>
  <tns:caseDefinition>{1,1}</tns:caseDefinition>
  <tns:sensitivityOfCaseDetection>{1,1}</tns:sensitivityOfCaseDetection>
  <tns:specificityOfCaseDetection>{1,1}</tns:specificityOfCaseDetection>
  <tns:timeDelayOfCaseDetection>{1,1}</tns:timeDelayOfCaseDetection>
</tns:diseaseSurveillanceCapability>
Source
 
<element name="diseaseSurveillanceCapability" type="tns:DiseaseSurveillanceCapability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseSurveillanceCapability / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription apollo.tmp#Location
Type tns:Location
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Instance
 
<tns:location xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:locationDefinition>{1,1}</tns:locationDefinition>
  <tns:cartesianCircleLocationDefinition>{1,1}</tns:cartesianCircleLocationDefinition>
  <tns:textualDescription>{0,1}</tns:textualDescription>
</tns:location>
Source
 
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseSurveillanceCapability / tns:pathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:pathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:pathogen>
Source
 
<element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseSurveillanceCapability / tns:speciesOfCase
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by the NCBI taxonomy database that has been used to identify the species of some organism that meets a case definition.
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesOfCase" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000485" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier curated by the NCBI taxonomy database that has been used to identify the species of some organism that meets a case definition.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DiseaseSurveillanceCapability / tns:caseDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="caseDefinition" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseSurveillanceCapability / tns:sensitivityOfCaseDetection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The sensitivity of a system that classifies organisms into the binary categories of individual who meets the criteria of a particular case definition and individual who does NOT meet the criteria of a particular type of disease X.
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="sensitivityOfCaseDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000277" type="tns:Probability" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>The sensitivity of a system that classifies organisms into the binary categories of individual who meets the criteria of a particular case definition and individual who does NOT meet the criteria of a particular type of disease X.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DiseaseSurveillanceCapability / tns:specificityOfCaseDetection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The specificity of a system that classifies organisms into the binary categories of individual who meets the criteria of a particular case definition and individual who does NOT meet the criteria of a particular type of disease X.
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="specificityOfCaseDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000381" type="tns:Probability" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>The specificity of a system that classifies organisms into the binary categories of individual who meets the criteria of a particular case definition and individual who does NOT meet the criteria of a particular type of disease X.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DiseaseSurveillanceCapability / tns:timeDelayOfCaseDetection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The duration from the time an organism satisfies a case definition until a process or system detects the organism as satisfying that case definition
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:timeDelayOfCaseDetection xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:timeDelayOfCaseDetection>
Source
 
<element name="timeDelayOfCaseDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000267" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>The duration from the time an organism satisfies a case definition until a process or system detects the organism as satisfying that case definition</documentation>
  </annotation>
</element>
[ top ]
Element tns:TreatmentSurveillanceTriggerDefinition / tns:reactiveControlMeasureTest
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="reactiveControlMeasureTest" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000130" type="token" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSurveillanceTriggerDefinition / tns:reactiveControlMeasureThreshold
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type int
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="reactiveControlMeasureThreshold" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000131" type="int" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSurveillanceTriggerDefinition / tns:reactiveControlMeasureOperator
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#OperatorEnum
Type tns:OperatorEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration less_than_or_equal
enumeration greater_than_or_equal
Source
 
<element name="reactiveControlMeasureOperator" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000474" type="tns:OperatorEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSurveillanceTriggerDefinition / tns:unitOfMeasureForThreshold
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfMeasureEnum
Type tns:UnitOfMeasureEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Source
 
<element name="unitOfMeasureForThreshold" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000295" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSurveillanceTriggerDefinition / tns:treatmentSurveillanceCapability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentSurveillanceCapability_location apollo.tmp#TreatmentSurveillanceCapability_treatment apollo.tmp#TreatmentSurveillanceCapability_sensitivityOfTreatmentDetection apollo.tmp#TreatmentSurveillanceCapability_specificityOfTreatmentDetection apollo.tmp#TreatmentSurveillanceCapability_timeDelayOfTreatmentDetection apollo.tmp#TreatmentSurveillanceCapability
Type tns:TreatmentSurveillanceCapability
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:location, tns:sensitivityOfTreatmentDetection, tns:specificityOfTreatmentDetection, tns:timeDelayOfTreatmentDetection, tns:treatment
Instance
 
<tns:treatmentSurveillanceCapability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:location>{1,1}</tns:location>
  <tns:treatment>{1,1}</tns:treatment>
  <tns:sensitivityOfTreatmentDetection>{1,1}</tns:sensitivityOfTreatmentDetection>
  <tns:specificityOfTreatmentDetection>{1,1}</tns:specificityOfTreatmentDetection>
  <tns:timeDelayOfTreatmentDetection>{1,1}</tns:timeDelayOfTreatmentDetection>
</tns:treatmentSurveillanceCapability>
Source
 
<element name="treatmentSurveillanceCapability" type="tns:TreatmentSurveillanceCapability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSurveillanceCapability / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription apollo.tmp#Location
Type tns:Location
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Instance
 
<tns:location xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:locationDefinition>{1,1}</tns:locationDefinition>
  <tns:cartesianCircleLocationDefinition>{1,1}</tns:cartesianCircleLocationDefinition>
  <tns:textualDescription>{0,1}</tns:textualDescription>
</tns:location>
Source
 
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSurveillanceCapability / tns:treatment
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualTreatmentEnum
Type tns:IndividualTreatmentEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration vaccination
enumeration antiviral_treatment
Source
 
<element name="treatment" type="tns:IndividualTreatmentEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSurveillanceCapability / tns:sensitivityOfTreatmentDetection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The sensitivity of a system that classifies organisms into the binary categories of having received a particular treatment and not having received a particular treatment.
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="sensitivityOfTreatmentDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000383" type="tns:Probability" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>The sensitivity of a system that classifies organisms into the binary categories of having received a particular treatment and not having received a particular treatment.</documentation>
  </annotation>
</element>
[ top ]
Element tns:TreatmentSurveillanceCapability / tns:specificityOfTreatmentDetection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The specificity of a system that classifies organisms into the binary categories of having received a particular treatment and not having received a particular treatment.
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="specificityOfTreatmentDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000382" type="tns:Probability" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>The specificity of a system that classifies organisms into the binary categories of having received a particular treatment and not having received a particular treatment.</documentation>
  </annotation>
</element>
[ top ]
Element tns:TreatmentSurveillanceCapability / tns:timeDelayOfTreatmentDetection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The duration from the time an individual receives a treatment until the time a system designed to detect that the treatment occurred detects it in a population
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:timeDelayOfTreatmentDetection xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:timeDelayOfTreatmentDetection>
Source
 
<element name="timeDelayOfTreatmentDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000291" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>The duration from the time an individual receives a treatment until the time a system designed to detect that the treatment occurred detects it in a population</documentation>
  </annotation>
</element>
[ top ]
Element tns:IndividualTreatmentControlMeasure / tns:pathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:pathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:pathogen>
Source
 
<element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:IndividualTreatmentControlMeasure / tns:taxonOfTreatedIndividual
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="taxonOfTreatedIndividual" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:IndividualTreatmentControlMeasure / tns:individualTreatment
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Treatment_description apollo.tmp#Treatment_speciesOfTreatedOrganism apollo.tmp#Treatment_pathogen apollo.tmp#Treatment_numDosesInTreatmentCourse apollo.tmp#Treatment_durationOfTreatmentCourse apollo.tmp#Treatment_treatmentContraindications apollo.tmp#Treatment
Type tns:Treatment
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:description, tns:durationOfTreatmentCourse, tns:numDosesInTreatmentCourse, tns:pathogen, tns:speciesOfTreatedOrganism, tns:treatmentContraindications
Instance
 
<tns:individualTreatment xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:speciesOfTreatedOrganism>{1,1}</tns:speciesOfTreatedOrganism>
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:numDosesInTreatmentCourse>{1,1}</tns:numDosesInTreatmentCourse>
  <tns:durationOfTreatmentCourse>{1,1}</tns:durationOfTreatmentCourse>
  <tns:treatmentContraindications>{0,unbounded}</tns:treatmentContraindications>
</tns:individualTreatment>
Source
 
<element name="individualTreatment" type="tns:Treatment" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Treatment / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Treatment / tns:speciesOfTreatedOrganism
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by the NCBI taxonomy database that specifies the taxonomic classification of some organism that is the recipient of some treatment.
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesOfTreatedOrganism" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000460" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier curated by the NCBI taxonomy database that specifies the taxonomic classification of some organism that is the recipient of some treatment.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Treatment / tns:pathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:pathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:pathogen>
Source
 
<element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Treatment / tns:numDosesInTreatmentCourse
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The count of the number of doses that are part of a treatment course.
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="numDosesInTreatmentCourse" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000281" type="positiveInteger" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>The count of the number of doses that are part of a treatment course.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Treatment / tns:durationOfTreatmentCourse
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A duration that measures the temporal interval occupied by a treatment course.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:durationOfTreatmentCourse xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:durationOfTreatmentCourse>
Source
 
<element name="durationOfTreatmentCourse" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000280" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A duration that measures the temporal interval occupied by a treatment course.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Treatment / tns:treatmentContraindications
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentContraindication_description apollo.tmp#TreatmentContraindication_simulatorReferencablePopulation apollo.tmp#TreatmentContraindication_fractionOfSimulatorReferencablePopulation apollo.tmp#TreatmentContraindication
Type tns:TreatmentContraindication
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:description, tns:fractionOfSimulatorReferencablePopulation, tns:simulatorReferencablePopulation
Instance
 
<tns:treatmentContraindications xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{0,1}</tns:description>
  <tns:simulatorReferencablePopulation>{0,1}</tns:simulatorReferencablePopulation>
  <tns:fractionOfSimulatorReferencablePopulation>{0,1}</tns:fractionOfSimulatorReferencablePopulation>
</tns:treatmentContraindications>
Source
 
<element name="treatmentContraindications" type="tns:TreatmentContraindication" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:TreatmentContraindication / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:TreatmentContraindication / tns:simulatorReferencablePopulation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A simulation of a population or populations of organisms of a particular biological taxon that simulates a particular type of event or types of event that occur in a specified time interval.
Diagram
Diagram apollo.tmp#TargetPopulationDefinition_ageRange apollo.tmp#TargetPopulationDefinition_sex apollo.tmp#TargetPopulationDefinition_diseaseOutcome apollo.tmp#TargetPopulationDefinition_otherStratification apollo.tmp#TargetPopulationDefinition
Type tns:TargetPopulationDefinition
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:ageRange, tns:diseaseOutcome, tns:otherStratification, tns:sex
Instance
 
<tns:simulatorReferencablePopulation xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ageRange>{0,1}</tns:ageRange>
  <tns:sex>{0,1}</tns:sex>
  <tns:diseaseOutcome>{0,1}</tns:diseaseOutcome>
  <tns:otherStratification>{0,1}</tns:otherStratification>
</tns:simulatorReferencablePopulation>
Source
 
<element name="simulatorReferencablePopulation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000031" type="tns:TargetPopulationDefinition" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A simulation of a population or populations of organisms of a particular biological taxon that simulates a particular type of event or types of event that occur in a specified time interval.</documentation>
  </annotation>
</element>
[ top ]
Element tns:TargetPopulationDefinition / tns:ageRange
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#AgeRangeCategoryDefinition_label apollo.tmp#AgeRangeCategoryDefinition_unitOfTimeForLowerBound apollo.tmp#AgeRangeCategoryDefinition_lowerBound apollo.tmp#AgeRangeCategoryDefinition_unitOfTimeForUpperBound apollo.tmp#AgeRangeCategoryDefinition_upperBound apollo.tmp#AgeRangeCategoryDefinition
Type tns:AgeRangeCategoryDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:label, tns:lowerBound, tns:unitOfTimeForLowerBound, tns:unitOfTimeForUpperBound, tns:upperBound
Instance
 
<tns:ageRange xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:label>{0,1}</tns:label>
  <tns:unitOfTimeForLowerBound>{1,1}</tns:unitOfTimeForLowerBound>
  <tns:lowerBound>{1,1}</tns:lowerBound>
  <tns:unitOfTimeForUpperBound>{1,1}</tns:unitOfTimeForUpperBound>
  <tns:upperBound>{1,1}</tns:upperBound>
</tns:ageRange>
Source
 
<element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:TargetPopulationDefinition / tns:sex
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GenderEnum
Type tns:GenderEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration M
enumeration F
enumeration U
Source
 
<element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:TargetPopulationDefinition / tns:diseaseOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A processual entity that is either the outcome of a disease course or a part of a disease course and has etiological relevance.
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="diseaseOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000204" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A processual entity that is either the outcome of a disease course or a part of a disease course and has etiological relevance.</documentation>
  </annotation>
</element>
[ top ]
Element tns:TargetPopulationDefinition / tns:otherStratification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PopulationStratificationEnum
Type tns:PopulationStratificationEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration essential_workforce
enumeration pregnant
enumeration high_risk
Source
 
<element name="otherStratification" type="tns:PopulationStratificationEnum" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:TreatmentContraindication / tns:fractionOfSimulatorReferencablePopulation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionOfSimulatorReferencablePopulation" type="tns:Fraction" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:IndividualTreatmentControlMeasure / tns:populationTreatmentCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#PopulationTreatmentCensus_populationSpecies apollo.tmp#PopulationTreatmentCensus_treatmentCensusData apollo.tmp#PopulationTreatmentCensus
Type tns:PopulationTreatmentCensus
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:description, tns:location, tns:populationSpecies, tns:referenceDate, tns:simulatorTime, tns:treatmentCensusData
Instance
 
<tns:populationTreatmentCensus xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{1,1}</tns:location>
  <tns:simulatorTime>{1,1}</tns:simulatorTime>
  <tns:referenceDate>{0,1}</tns:referenceDate>
  <tns:populationSpecies>{1,1}</tns:populationSpecies>
  <tns:treatmentCensusData>{1,1}</tns:treatmentCensusData>
</tns:populationTreatmentCensus>
Source
 
<element name="populationTreatmentCensus" type="tns:PopulationTreatmentCensus" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:IndividualTreatmentControlMeasure / tns:compliance
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum about the fraction of individuals in a population that elect to participate in a control strategy when offered.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:compliance xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:compliance>
Source
 
<element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A measurement datum about the fraction of individuals in a population that elect to participate in a control strategy when offered.</documentation>
  </annotation>
</element>
[ top ]
Element tns:IndividualTreatmentControlMeasure / tns:delayFromSymptomsToTreatment
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The duration between the appearance of symptoms of a disease and the start of a treatment.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:delayFromSymptomsToTreatment xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:delayFromSymptomsToTreatment>
Source
 
<element name="delayFromSymptomsToTreatment" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000258" type="tns:Duration" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>The duration between the appearance of symptoms of a disease and the start of a treatment.</documentation>
  </annotation>
</element>
[ top ]
Element tns:IndividualTreatmentControlMeasure / tns:treatmentSystemLogistics
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentSystemLogistics_description apollo.tmp#TreatmentSystemLogistics_location apollo.tmp#TreatmentSystemLogistics_supplySchedulePerDay apollo.tmp#TreatmentSystemLogistics_supplyScheduleUnits apollo.tmp#TreatmentSystemLogistics_administrationCapacityPerDay apollo.tmp#TreatmentSystemLogistics_administrationCapacityUnits apollo.tmp#TreatmentSystemLogistics
Type tns:TreatmentSystemLogistics
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:administrationCapacityPerDay, tns:administrationCapacityUnits, tns:description, tns:location, tns:supplySchedulePerDay, tns:supplyScheduleUnits
Instance
 
<tns:treatmentSystemLogistics xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{0,1}</tns:description>
  <tns:location>{1,1}</tns:location>
  <tns:supplySchedulePerDay>{0,unbounded}</tns:supplySchedulePerDay>
  <tns:supplyScheduleUnits>{0,1}</tns:supplyScheduleUnits>
  <tns:administrationCapacityPerDay>{0,unbounded}</tns:administrationCapacityPerDay>
  <tns:administrationCapacityUnits>{0,1}</tns:administrationCapacityUnits>
</tns:treatmentSystemLogistics>
Source
 
<element name="treatmentSystemLogistics" type="tns:TreatmentSystemLogistics" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSystemLogistics / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:TreatmentSystemLogistics / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription apollo.tmp#Location
Type tns:Location
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Instance
 
<tns:location xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:locationDefinition>{1,1}</tns:locationDefinition>
  <tns:cartesianCircleLocationDefinition>{1,1}</tns:cartesianCircleLocationDefinition>
  <tns:textualDescription>{0,1}</tns:textualDescription>
</tns:location>
Source
 
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TreatmentSystemLogistics / tns:supplySchedulePerDay
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="supplySchedulePerDay" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:TreatmentSystemLogistics / tns:supplyScheduleUnits
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfMeasureEnum
Type tns:UnitOfMeasureEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Source
 
<element name="supplyScheduleUnits" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:TreatmentSystemLogistics / tns:administrationCapacityPerDay
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="administrationCapacityPerDay" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:TreatmentSystemLogistics / tns:administrationCapacityUnits
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfMeasureEnum
Type tns:UnitOfMeasureEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Source
 
<element name="administrationCapacityUnits" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:IndividualTreatmentControlMeasure / tns:targetPopulationsAndPrioritizations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ControlMeasureTargetPopulationsAndPrioritization_controlMeasureNamedPrioritizationScheme apollo.tmp#ControlMeasureTargetPopulationsAndPrioritization_controlMeasureTargetPopulationsAndPrioritization apollo.tmp#ControlMeasureTargetPopulationsAndPrioritization
Type tns:ControlMeasureTargetPopulationsAndPrioritization
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:controlMeasureNamedPrioritizationScheme, tns:controlMeasureTargetPopulationsAndPrioritization
Instance
 
<tns:targetPopulationsAndPrioritizations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:controlMeasureNamedPrioritizationScheme>{1,1}</tns:controlMeasureNamedPrioritizationScheme>
  <tns:controlMeasureTargetPopulationsAndPrioritization>{1,unbounded}</tns:controlMeasureTargetPopulationsAndPrioritization>
</tns:targetPopulationsAndPrioritizations>
Source
 
<element name="targetPopulationsAndPrioritizations" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000282" type="tns:ControlMeasureTargetPopulationsAndPrioritization" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ControlMeasureTargetPopulationsAndPrioritization / tns:controlMeasureNamedPrioritizationScheme
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An action specification that is part of an infectious disease control strategy that has at least one rule pertaining to some control measure.
Diagram
Diagram apollo.tmp#NamedPrioritizationSchemeEnum
Type tns:NamedPrioritizationSchemeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration treat_sick_only
enumeration ACIP
enumeration HHTAP
enumeration HHTAP100
enumeration none
Source
 
<element name="controlMeasureNamedPrioritizationScheme" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000517" type="tns:NamedPrioritizationSchemeEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An action specification that is part of an infectious disease control strategy that has at least one rule pertaining to some control measure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:ControlMeasureTargetPopulationsAndPrioritization / tns:controlMeasureTargetPopulationsAndPrioritization
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TargetPriorityPopulation_description apollo.tmp#TargetPriorityPopulation_targetPopulationDefinition apollo.tmp#TargetPriorityPopulation_targetPopulationEnum apollo.tmp#TargetPriorityPopulation_fractionOfTargetPopulationToPrioritize apollo.tmp#TargetPriorityPopulation_priority apollo.tmp#TargetPriorityPopulation
Type tns:TargetPriorityPopulation
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:description, tns:fractionOfTargetPopulationToPrioritize, tns:priority, tns:targetPopulationDefinition, tns:targetPopulationEnum
Instance
 
<tns:controlMeasureTargetPopulationsAndPrioritization xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:targetPopulationDefinition>{1,1}</tns:targetPopulationDefinition>
  <tns:targetPopulationEnum>{1,1}</tns:targetPopulationEnum>
  <tns:fractionOfTargetPopulationToPrioritize>{1,1}</tns:fractionOfTargetPopulationToPrioritize>
  <tns:priority>{1,1}</tns:priority>
</tns:controlMeasureTargetPopulationsAndPrioritization>
Source
 
<element name="controlMeasureTargetPopulationsAndPrioritization" type="tns:TargetPriorityPopulation" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:TargetPriorityPopulation / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="token" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:TargetPriorityPopulation / tns:targetPopulationDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TargetPopulationDefinition_ageRange apollo.tmp#TargetPopulationDefinition_sex apollo.tmp#TargetPopulationDefinition_diseaseOutcome apollo.tmp#TargetPopulationDefinition_otherStratification apollo.tmp#TargetPopulationDefinition
Type tns:TargetPopulationDefinition
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:ageRange, tns:diseaseOutcome, tns:otherStratification, tns:sex
Instance
 
<tns:targetPopulationDefinition xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ageRange>{0,1}</tns:ageRange>
  <tns:sex>{0,1}</tns:sex>
  <tns:diseaseOutcome>{0,1}</tns:diseaseOutcome>
  <tns:otherStratification>{0,1}</tns:otherStratification>
</tns:targetPopulationDefinition>
Source
 
<element name="targetPopulationDefinition" type="tns:TargetPopulationDefinition" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TargetPriorityPopulation / tns:targetPopulationEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TargetPopulationEnum
Type tns:TargetPopulationEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration all
enumeration members_of_the_same_household
enumeration newly_sick
enumeration household_member_of_infant
enumeration icuPatient
enumeration colonizedIcuPatient
enumeration icuPatient
enumeration colonizedWardPatient
enumeration colonizedLongTermCareFacilityResident
Source
 
<element name="targetPopulationEnum" type="tns:TargetPopulationEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TargetPriorityPopulation / tns:fractionOfTargetPopulationToPrioritize
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionOfTargetPopulationToPrioritize" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:TargetPriorityPopulation / tns:priority
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="priority" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:RingIndividualTreatmentControlMeasure / tns:ringDiameterInMeters
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A scalar value specification that gives the diameter in meters of the circular area around which all organisms in a population are living will receive a vaccination as part of a ring vaccination control measure.
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="ringDiameterInMeters" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000430" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A scalar value specification that gives the diameter in meters of the circular area around which all organisms in a population are living will receive a vaccination as part of a ring vaccination control measure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Vaccination / tns:vaccineId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#vaccineOntologyId
Type tns:vaccineOntologyId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [A-Z_0-9]{2,17}
Source
 
<element name="vaccineId" type="tns:vaccineOntologyId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Vaccination / tns:vaccinationEfficacies
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The infectious disease treatment efficacy of a vaccine.
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#VaccinationEfficacyForSimulatorConfiguration_averageVaccinationEfficacy apollo.tmp#VaccinationEfficacyForSimulatorConfiguration_vaccinationEfficacyConditionedOnAgeRange apollo.tmp#VaccinationEfficacyForSimulatorConfiguration_vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose apollo.tmp#VaccinationEfficacyForSimulatorConfiguration
Type tns:VaccinationEfficacyForSimulatorConfiguration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:averageVaccinationEfficacy, tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:strainIdentifier, tns:vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose, tns:vaccinationEfficacyConditionedOnAgeRange
Instance
 
<tns:vaccinationEfficacies xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:hostIdentifier>{1,1}</tns:hostIdentifier>
  <tns:strainIdentifier>{1,1}</tns:strainIdentifier>
  <tns:forTreatmentPreventableOutcome>{1,1}</tns:forTreatmentPreventableOutcome>
  <tns:averageVaccinationEfficacy>{1,1}</tns:averageVaccinationEfficacy>
  <tns:vaccinationEfficacyConditionedOnAgeRange>{0,1}</tns:vaccinationEfficacyConditionedOnAgeRange>
  <tns:vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose>{0,1}</tns:vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose>
</tns:vaccinationEfficacies>
Source
 
<element name="vaccinationEfficacies" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000025" type="tns:VaccinationEfficacyForSimulatorConfiguration" maxOccurs="unbounded" minOccurs="1">
  <annotation>
    <documentation>The infectious disease treatment efficacy of a vaccine.</documentation>
  </annotation>
</element>
[ top ]
Element tns:TreatmentEfficacy / tns:hostIdentifier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="hostIdentifier" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:TreatmentEfficacy / tns:strainIdentifier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:strainIdentifier xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:strainIdentifier>
Source
 
<element name="strainIdentifier" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:TreatmentEfficacy / tns:forTreatmentPreventableOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentPreventableOutcomeEnum
Type tns:TreatmentPreventableOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration infection
enumeration infectiousness
enumeration sickness requiring medical attention
enumeration sickness requiring intensive care
enumeration death
Source
 
<element name="forTreatmentPreventableOutcome" type="tns:TreatmentPreventableOutcomeEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyForSimulatorConfiguration / tns:averageVaccinationEfficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="averageVaccinationEfficacy" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyForSimulatorConfiguration / tns:vaccinationEfficacyConditionedOnAgeRange
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#ConditionalProbabilityDistribution_firstConditioningVariable apollo.tmp#ConditionalProbabilityDistribution
Type tns:ConditionalProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:firstConditioningVariable, tns:referenceId
Instance
 
<tns:vaccinationEfficacyConditionedOnAgeRange xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:firstConditioningVariable>{1,1}</tns:firstConditioningVariable>
</tns:vaccinationEfficacyConditionedOnAgeRange>
Source
 
<element name="vaccinationEfficacyConditionedOnAgeRange" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccinationEfficacyForSimulatorConfiguration / tns:vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VaccinationEfficacyConditionedOnTimeSinceDose_numberOfDosesAdministered apollo.tmp#VaccinationEfficacyConditionedOnTimeSinceDose_timeIntervalLabelDefinitions apollo.tmp#VaccinationEfficacyConditionedOnTimeSinceDose_vaccinationEfficacyConditionedOnTimeSinceMostRecentDose apollo.tmp#VaccinationEfficacyConditionedOnTimeSinceDose
Type tns:VaccinationEfficacyConditionedOnTimeSinceDose
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:numberOfDosesAdministered, tns:timeIntervalLabelDefinitions, tns:vaccinationEfficacyConditionedOnTimeSinceMostRecentDose
Instance
 
<tns:vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numberOfDosesAdministered>{1,1}</tns:numberOfDosesAdministered>
  <tns:timeIntervalLabelDefinitions>{1,unbounded}</tns:timeIntervalLabelDefinitions>
  <tns:vaccinationEfficacyConditionedOnTimeSinceMostRecentDose>{1,unbounded}</tns:vaccinationEfficacyConditionedOnTimeSinceMostRecentDose>
</tns:vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose>
Source
 
<element name="vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose" type="tns:VaccinationEfficacyConditionedOnTimeSinceDose" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccinationEfficacyConditionedOnTimeSinceDose / tns:numberOfDosesAdministered
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="numberOfDosesAdministered" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyConditionedOnTimeSinceDose / tns:timeIntervalLabelDefinitions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TimeAxisCategoryLabels_label apollo.tmp#TimeAxisCategoryLabels_simulatorTimeEarliest apollo.tmp#TimeAxisCategoryLabels_simulatorTimeLatest apollo.tmp#TimeAxisCategoryLabels
Type tns:TimeAxisCategoryLabels
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:label, tns:simulatorTimeEarliest, tns:simulatorTimeLatest
Instance
 
<tns:timeIntervalLabelDefinitions xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:label>{1,1}</tns:label>
  <tns:simulatorTimeEarliest>{1,1}</tns:simulatorTimeEarliest>
  <tns:simulatorTimeLatest>{1,1}</tns:simulatorTimeLatest>
</tns:timeIntervalLabelDefinitions>
Source
 
<element name="timeIntervalLabelDefinitions" type="tns:TimeAxisCategoryLabels" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:TimeAxisCategoryLabels / tns:label
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="label" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000009" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label</documentation>
  </annotation>
</element>
[ top ]
Element tns:TimeAxisCategoryLabels / tns:simulatorTimeEarliest
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="simulatorTimeEarliest" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:TimeAxisCategoryLabels / tns:simulatorTimeLatest
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="simulatorTimeLatest" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyConditionedOnTimeSinceDose / tns:vaccinationEfficacyConditionedOnTimeSinceMostRecentDose
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs unbounded
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="vaccinationEfficacyConditionedOnTimeSinceMostRecentDose" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Vaccine / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Vaccine / tns:vaccineIdentifier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="vaccineIdentifier" type="token" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Vaccine / tns:valence
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs unbounded
Source
 
<element name="valence" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000137" type="positiveInteger" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:VaccineContraindications / tns:infants
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="infants" type="boolean" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccineContraindications / tns:preschoolers
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="preschoolers" type="boolean" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccineContraindications / tns:schoolAgeChildren
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="schoolAgeChildren" type="boolean" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccineContraindications / tns:youngAdults
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="youngAdults" type="boolean" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccineContraindications / tns:olderAdults
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="olderAdults" type="boolean" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccineContraindications / tns:elderly
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="elderly" type="boolean" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccineContraindications / tns:pregnantAdultsRestricted
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="pregnantAdultsRestricted" type="boolean" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:AntiviralTreatment / tns:antiviralId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
a unique identifier that refers to an antiviral drug product
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="antiviralId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000122" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>a unique identifier that refers to an antiviral drug product</documentation>
  </annotation>
</element>
[ top ]
Element tns:AntiviralTreatment / tns:antiviralTreatmentEfficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#AntiviralTreatmentEfficacy_efficacy apollo.tmp#AntiviralTreatmentEfficacy
Type tns:AntiviralTreatmentEfficacy
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:efficacy, tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:strainIdentifier
Instance
 
<tns:antiviralTreatmentEfficacy xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:hostIdentifier>{1,1}</tns:hostIdentifier>
  <tns:strainIdentifier>{1,1}</tns:strainIdentifier>
  <tns:forTreatmentPreventableOutcome>{1,1}</tns:forTreatmentPreventableOutcome>
  <tns:efficacy>{1,1}</tns:efficacy>
</tns:antiviralTreatmentEfficacy>
Source
 
<element name="antiviralTreatmentEfficacy" type="tns:AntiviralTreatmentEfficacy" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:AntiviralTreatmentEfficacy / tns:efficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A disposition of an organism to (i) undergo some bodily benefit that (ii) is triggered by a planned process.
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="efficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000454" type="tns:Probability" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A disposition of an organism to (i) undergo some bodily benefit that (ii) is triggered by a planned process.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DrugTreatment / tns:drugId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that denotes a drug product.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="drugId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000461" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that denotes a drug product.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DrugTreatment / tns:drugTreatmentEfficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The efficacy measured for some instance(s) of drug treatment for preventing or ameliorating some disease outcome.
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#DrugTreatmentEfficacyForSimulatorConfiguration_averageDrugEfficacy apollo.tmp#DrugTreatmentEfficacyForSimulatorConfiguration_drugEfficacyConditionedOnAgeRange apollo.tmp#DrugTreatmentEfficacyForSimulatorConfiguration_drugEfficaciesConditionedOnCurrentDiseaseOutcome apollo.tmp#DrugTreatmentEfficacyForSimulatorConfiguration
Type tns:DrugTreatmentEfficacyForSimulatorConfiguration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:averageDrugEfficacy, tns:drugEfficaciesConditionedOnCurrentDiseaseOutcome, tns:drugEfficacyConditionedOnAgeRange, tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:strainIdentifier
Instance
 
<tns:drugTreatmentEfficacy xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:hostIdentifier>{1,1}</tns:hostIdentifier>
  <tns:strainIdentifier>{1,1}</tns:strainIdentifier>
  <tns:forTreatmentPreventableOutcome>{1,1}</tns:forTreatmentPreventableOutcome>
  <tns:averageDrugEfficacy>{1,1}</tns:averageDrugEfficacy>
  <tns:drugEfficacyConditionedOnAgeRange>{0,1}</tns:drugEfficacyConditionedOnAgeRange>
  <tns:drugEfficaciesConditionedOnCurrentDiseaseOutcome>{0,1}</tns:drugEfficaciesConditionedOnCurrentDiseaseOutcome>
</tns:drugTreatmentEfficacy>
Source
 
<element name="drugTreatmentEfficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000502" type="tns:DrugTreatmentEfficacyForSimulatorConfiguration" maxOccurs="unbounded" minOccurs="1">
  <annotation>
    <documentation>The efficacy measured for some instance(s) of drug treatment for preventing or ameliorating some disease outcome.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DrugTreatmentEfficacyForSimulatorConfiguration / tns:averageDrugEfficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="averageDrugEfficacy" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DrugTreatmentEfficacyForSimulatorConfiguration / tns:drugEfficacyConditionedOnAgeRange
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#ConditionalProbabilityDistribution_firstConditioningVariable apollo.tmp#ConditionalProbabilityDistribution
Type tns:ConditionalProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:firstConditioningVariable, tns:referenceId
Instance
 
<tns:drugEfficacyConditionedOnAgeRange xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:firstConditioningVariable>{1,1}</tns:firstConditioningVariable>
</tns:drugEfficacyConditionedOnAgeRange>
Source
 
<element name="drugEfficacyConditionedOnAgeRange" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:DrugTreatmentEfficacyForSimulatorConfiguration / tns:drugEfficaciesConditionedOnCurrentDiseaseOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#ConditionalProbabilityDistribution_firstConditioningVariable apollo.tmp#ConditionalProbabilityDistribution
Type tns:ConditionalProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:firstConditioningVariable, tns:referenceId
Instance
 
<tns:drugEfficaciesConditionedOnCurrentDiseaseOutcome xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:firstConditioningVariable>{1,1}</tns:firstConditioningVariable>
</tns:drugEfficaciesConditionedOnCurrentDiseaseOutcome>
Source
 
<element name="drugEfficaciesConditionedOnCurrentDiseaseOutcome" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:IndividualDecolonization / tns:name
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualDecolonizationEnum
Type tns:IndividualDecolonizationEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration chlorhexidine
enumeration chlorhexidineAndIntranasalMupirocin
Source
 
<element name="name" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0020000" type="tns:IndividualDecolonizationEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:IndividualDecolonization / tns:efficacies
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs unbounded
Source
 
<element name="efficacies" type="string" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyInferred / tns:inferredFromTheseStudies
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VaccinationEfficacyStudy_description apollo.tmp#VaccinationEfficacyStudy_vaccinationPreventableOutcome apollo.tmp#VaccinationEfficacyStudy_vaccinationEfficacyMeasured apollo.tmp#VaccinationEfficacyStudy_dataSets apollo.tmp#VaccinationEfficacyStudy_references apollo.tmp#VaccinationEfficacyStudy
Type tns:VaccinationEfficacyStudy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:dataSets, tns:description, tns:references, tns:vaccinationEfficacyMeasured, tns:vaccinationPreventableOutcome
Instance
 
<tns:inferredFromTheseStudies xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{0,1}</tns:description>
  <tns:vaccinationPreventableOutcome>{1,1}</tns:vaccinationPreventableOutcome>
  <tns:vaccinationEfficacyMeasured>{1,unbounded}</tns:vaccinationEfficacyMeasured>
  <tns:dataSets>{1,unbounded}</tns:dataSets>
  <tns:references>{1,unbounded}</tns:references>
</tns:inferredFromTheseStudies>
Source
 
<element name="inferredFromTheseStudies" type="tns:VaccinationEfficacyStudy" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyStudy / tns:description
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:VaccinationEfficacyStudy / tns:vaccinationPreventableOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An objective specification that specifies the disease outcome a vaccination seeks to prevent.
Diagram
Diagram apollo.tmp#TreatmentPreventableOutcomeEnum
Type tns:TreatmentPreventableOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration infection
enumeration infectiousness
enumeration sickness requiring medical attention
enumeration sickness requiring intensive care
enumeration death
Source
 
<element name="vaccinationPreventableOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000218" type="tns:TreatmentPreventableOutcomeEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An objective specification that specifies the disease outcome a vaccination seeks to prevent.</documentation>
  </annotation>
</element>
[ top ]
Element tns:VaccinationEfficacyStudy / tns:vaccinationEfficacyMeasured
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#VaccinationEfficacyMeasured_measuredEfficacyValue apollo.tmp#VaccinationEfficacyMeasured
Type tns:VaccinationEfficacyMeasured
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:measuredEfficacyValue, tns:strainIdentifier
Instance
 
<tns:vaccinationEfficacyMeasured xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:hostIdentifier>{1,1}</tns:hostIdentifier>
  <tns:strainIdentifier>{1,1}</tns:strainIdentifier>
  <tns:forTreatmentPreventableOutcome>{1,1}</tns:forTreatmentPreventableOutcome>
  <tns:measuredEfficacyValue>{1,1}</tns:measuredEfficacyValue>
</tns:vaccinationEfficacyMeasured>
Source
 
<element name="vaccinationEfficacyMeasured" type="tns:VaccinationEfficacyMeasured" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyMeasured / tns:measuredEfficacyValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ConditionalProbabilityTable_axisDefinitions apollo.tmp#ConditionalProbabilityTable_pointProbabilities apollo.tmp#ConditionalProbabilityTable_parametricDistribution apollo.tmp#ConditionalProbabilityTable
Type tns:ConditionalProbabilityTable
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:axisDefinitions, tns:parametricDistribution, tns:pointProbabilities
Instance
 
<tns:measuredEfficacyValue xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:axisDefinitions>{1,1}</tns:axisDefinitions>
  <tns:pointProbabilities>{1,unbounded}</tns:pointProbabilities>
  <tns:parametricDistribution>{1,unbounded}</tns:parametricDistribution>
</tns:measuredEfficacyValue>
Source
 
<element name="measuredEfficacyValue" type="tns:ConditionalProbabilityTable" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ConditionalProbabilityTable / tns:axisDefinitions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ArrayDimensionsDefinition
Type tns:ArrayDimensionsDefinition
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="axisDefinitions" type="tns:ArrayDimensionsDefinition" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ConditionalProbabilityTable / tns:pointProbabilities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs unbounded
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="pointProbabilities" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:ConditionalProbabilityTable / tns:parametricDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs unbounded
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="parametricDistribution" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyStudy / tns:dataSets
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that is an aggregate of other data items of the same type that have something in common. Averages and distributions can be determined for data sets.
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs unbounded
Source
 
<element name="dataSets" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000100" type="string" maxOccurs="unbounded" minOccurs="1">
  <annotation>
    <documentation>A data item that is an aggregate of other data items of the same type that have something in common. Averages and distributions can be determined for data sets.</documentation>
  </annotation>
</element>
[ top ]
Element tns:VaccinationEfficacyStudy / tns:references
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs unbounded
Source
 
<element name="references" type="string" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:VaccinationEfficacyInferred / tns:vaccinationEfficacyModel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#BayesianNetwork_networkStructure apollo.tmp#BayesianNetwork_CPTs apollo.tmp#BayesianNetwork_PPFs apollo.tmp#BayesianNetwork_GeNIE_XML apollo.tmp#BayesianNetwork
Type tns:BayesianNetwork
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:CPTs, tns:GeNIE_XML, tns:PPFs, tns:networkStructure, tns:referenceId
Instance
 
<tns:vaccinationEfficacyModel xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:networkStructure>{1,1}</tns:networkStructure>
  <tns:CPTs>{0,unbounded}</tns:CPTs>
  <tns:PPFs>{0,unbounded}</tns:PPFs>
  <tns:GeNIE_XML>{0,1}</tns:GeNIE_XML>
</tns:vaccinationEfficacyModel>
Source
 
<element name="vaccinationEfficacyModel" type="tns:BayesianNetwork" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:BayesianNetwork / tns:networkStructure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#BayesianNetworkStructureType
Type tns:BayesianNetworkStructureType
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="networkStructure" type="tns:BayesianNetworkStructureType" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:BayesianNetwork / tns:CPTs
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ConditionalProbabilityTable_axisDefinitions apollo.tmp#ConditionalProbabilityTable_pointProbabilities apollo.tmp#ConditionalProbabilityTable_parametricDistribution apollo.tmp#ConditionalProbabilityTable
Type tns:ConditionalProbabilityTable
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:axisDefinitions, tns:parametricDistribution, tns:pointProbabilities
Instance
 
<tns:CPTs xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:axisDefinitions>{1,1}</tns:axisDefinitions>
  <tns:pointProbabilities>{1,unbounded}</tns:pointProbabilities>
  <tns:parametricDistribution>{1,unbounded}</tns:parametricDistribution>
</tns:CPTs>
Source
 
<element name="CPTs" type="tns:ConditionalProbabilityTable" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:BayesianNetwork / tns:PPFs
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PrototypicalProbabilityFunction
Type tns:PrototypicalProbabilityFunction
Properties
content complex
minOccurs 0
maxOccurs unbounded
Source
 
<element name="PPFs" type="tns:PrototypicalProbabilityFunction" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:BayesianNetwork / tns:GeNIE_XML
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GeNIE_XMLType_theXML apollo.tmp#GeNIE_XMLType
Type tns:GeNIE_XMLType
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:theXML
Instance
 
<tns:GeNIE_XML xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:theXML>{1,1}</tns:theXML>
</tns:GeNIE_XML>
Source
 
<element name="GeNIE_XML" type="tns:GeNIE_XMLType" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:GeNIE_XMLType / tns:theXML
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="theXML" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PlaceClosureControlMeasure / tns:placeClass
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PlaceEnum
Type tns:PlaceEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration allSchools
enumeration allSchoolsOfOneLevelInOneTract
enumeration workplace
enumeration nzaraCottonFactory
enumeration home
Source
 
<element name="placeClass" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PlaceClosureControlMeasure / tns:closeIndividualPlacesIndependently
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="closeIndividualPlacesIndependently" type="boolean" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PlaceClosureControlMeasure / tns:closurePeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:closurePeriod xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:closurePeriod>
Source
 
<element name="closurePeriod" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000287" type="tns:Duration" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PlaceClosureControlMeasure / tns:householdTransmissionMultiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a household.
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="householdTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000284" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a household.</documentation>
  </annotation>
</element>
[ top ]
Element tns:PlaceClosureControlMeasure / tns:communityTransmissionMultiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="communityTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000288" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:CaseQuarantineControlMeasure / tns:quarantinePeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A temporal region occupied by some process wherein one or more potentially infectious contact organisms (i.e., contacted organisms) are under physical isolation from other organisms within a population.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:quarantinePeriod xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:quarantinePeriod>
Source
 
<element name="quarantinePeriod" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000449" type="tns:Duration" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A temporal region occupied by some process wherein one or more potentially infectious contact organisms (i.e., contacted organisms) are under physical isolation from other organisms within a population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseQuarantineControlMeasure / tns:compliance
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:compliance xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:compliance>
Source
 
<element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CaseQuarantineControlMeasure / tns:householdTransmissionMultiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="householdTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000284" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:CaseQuarantineControlMeasure / tns:schoolTransmissionMultiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a school.
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="schoolTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000283" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a school.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseQuarantineControlMeasure / tns:workplaceTransmissionMultiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a workplace.
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="workplaceTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000285" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a workplace.</documentation>
  </annotation>
</element>
[ top ]
Element tns:ContactIsolationControlMeasure / tns:contactDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactDefinition_apolloLabel apollo.tmp#ContactDefinition_investigationLabel apollo.tmp#ContactDefinition_investigationDefinition apollo.tmp#ContactDefinition_referenceId apollo.tmp#ContactDefinition
Type tns:ContactDefinition
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLabel, tns:investigationDefinition, tns:investigationLabel, tns:referenceId
Instance
 
<tns:contactDefinition xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLabel>{1,1}</tns:apolloLabel>
  <tns:investigationLabel>{1,1}</tns:investigationLabel>
  <tns:investigationDefinition>{1,1}</tns:investigationDefinition>
  <tns:referenceId>{1,1}</tns:referenceId>
</tns:contactDefinition>
Source
 
<element name="contactDefinition" type="tns:ContactDefinition" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactDefinition / tns:apolloLabel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactDefinitionEnum
Type tns:ContactDefinitionEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration primaryContact
enumeration secondaryContact
enumeration infectedMosquitoBitesSusceptibleHuman
enumeration susceptibleMosquitoBitesInfectiousHuman
enumeration parenteralInjection
enumeration physicalContact
enumeration contactWithBodyFluids
enumeration assistedChildbirthOfInfectedMother
Source
 
<element name="apolloLabel" type="tns:ContactDefinitionEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactDefinition / tns:investigationLabel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="investigationLabel" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001628" type="token" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactDefinition / tns:investigationDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="investigationDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001615" type="token" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactDefinition / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactIsolationControlMeasure / tns:isolationPeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:isolationPeriod xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:isolationPeriod>
Source
 
<element name="isolationPeriod" type="tns:Duration" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactIsolationControlMeasure / tns:compliance
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:compliance xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:compliance>
Source
 
<element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ContactIsolationControlMeasure / tns:efficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution
Type tns:ProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:referenceId
Instance
 
<tns:efficacy xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:efficacy>
Source
 
<element name="efficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000454" type="tns:ProbabilityDistribution" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:BorderControlMeasure / tns:probabilityEntryDenied
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity specifying the probability that entry is denied as part of a border control strategy.
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probabilityEntryDenied" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000278" type="tns:Probability" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An information content entity specifying the probability that entry is denied as part of a border control strategy.</documentation>
  </annotation>
</element>
[ top ]
Element tns:BorderControlMeasure / tns:probabilityExitDenied
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity specifying the probability that exit is denied as part of a border control strategy.
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probabilityExitDenied" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000279" type="tns:Probability" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An information content entity specifying the probability that exit is denied as part of a border control strategy.</documentation>
  </annotation>
</element>
[ top ]
Element tns:VectorControlMeasure / tns:vectorTaxonId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="vectorTaxonId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:InsecticideTreatedNetControlMeasure / tns:netHolingRate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:netHolingRate xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:netHolingRate>
Source
 
<element name="netHolingRate" type="tns:Rate" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InsecticideTreatedNetControlMeasure / tns:nightlyProbabilityOfUse
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="nightlyProbabilityOfUse" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:InsecticideTreatedNetControlMeasure / tns:insecticideEfficacyDecayRate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:insecticideEfficacyDecayRate xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:insecticideEfficacyDecayRate>
Source
 
<element name="insecticideEfficacyDecayRate" type="tns:Rate" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaSitesEveryNth
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A vector release site action specification for a Wolbachia control measure.
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="wolbachiaSitesEveryNth" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000411" type="positiveInteger" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A vector release site action specification for a Wolbachia control measure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaSeedAdultsPerHouse
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A vector control action specification that specifies the number of Wolbachia-infected adult mosquitoes to be released at each household for some Wolbachia control measure.
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="wolbachiaSeedAdultsPerHouse" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000426" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A vector control action specification that specifies the number of Wolbachia-infected adult mosquitoes to be released at each household for some Wolbachia control measure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:clearWolbachiaOnMigration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator action specification that when set to true, results in the simuator clearing each simulated Wolbachia-infected mosquito of its simulated Wolbachia infection whenever it migrates out of the simulated population location.
Diagram
Diagram
Type boolean
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="clearWolbachiaOnMigration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000427" type="boolean" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An epidemic simulator action specification that when set to true, results in the simuator clearing each simulated Wolbachia-infected mosquito of its simulated Wolbachia infection whenever it migrates out of the simulated population location.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaReleaseInterval
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A seed release interval for a Wolbachia control measure.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration apollo.tmp#FixedDuration_value apollo.tmp#FixedDuration
Type tns:FixedDuration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime, tns:value
Instance
 
<tns:wolbachiaReleaseInterval xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:value>{1,1}</tns:value>
</tns:wolbachiaReleaseInterval>
Source
 
<element name="wolbachiaReleaseInterval" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000423" type="tns:FixedDuration" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A seed release interval for a Wolbachia control measure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaReleaseSites
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A seed site for a Wolbachia control measure.
Diagram
Diagram apollo.tmp#WolbachiaReleaseSiteEnum
Type tns:WolbachiaReleaseSiteEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration roads
enumeration ovi-sites
enumeration front-doors
Source
 
<element name="wolbachiaReleaseSites" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000410" type="tns:WolbachiaReleaseSiteEnum" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A seed site for a Wolbachia control measure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaEffectOnEggMortalityRate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A process of change in the egg mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaEffectOnEggMortalityRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000418" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A process of change in the egg mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaEffectOnAdultMortalityRate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A process of change in the adult mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaEffectOnAdultMortalityRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000419" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A process of change in the adult mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaEffectOnLarvalMortalityRate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A process of change in the larval mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaEffectOnLarvalMortalityRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000420" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A process of change in the larval mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaEffectOnFecundity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A process of change in fecundity of females in a mosquito population that is the outcome of an infection in that population with a Wolbachia bacteria population.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaEffectOnFecundity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000421" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A process of change in fecundity of females in a mosquito population that is the outcome of an infection in that population with a Wolbachia bacteria population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaEffectOnMatingProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An epidemic simulator actions specification that specifies the factor by which to multiply the mating probability of a male mosquito if it is infected with a Wolbachia bacterium.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaEffectOnMatingProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000431" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An epidemic simulator actions specification that specifies the factor by which to multiply the mating probability of a male mosquito if it is infected with a Wolbachia bacterium.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaEffectOnLeakageRate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The rate at which offspring of the Wolbachia-infected female mosquito subpopulation (of the overall mosquito population) are not infected with Wolbachia.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaEffectOnLeakageRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000412" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>The rate at which offspring of the Wolbachia-infected female mosquito subpopulation (of the overall mosquito population) are not infected with Wolbachia.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaEffectOnVectorialCapacity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The rate at which bites of mosquitoes infected with both Wolbachia and a particular pathogen such as dengue result in an infection in a susceptible human host.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaEffectOnVectorialCapacity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000413" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>The rate at which bites of mosquitoes infected with both Wolbachia and a particular pathogen such as dengue result in an infection in a susceptible human host.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaPreReleaseAdultSuppressionEfficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An adult vector control strategy that is used prior to a Wolbachia vector control strategy to increase the percentage of the adult population that gets infected with Wolbachia.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaPreReleaseAdultSuppressionEfficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000415" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An adult vector control strategy that is used prior to a Wolbachia vector control strategy to increase the percentage of the adult population that gets infected with Wolbachia.</documentation>
  </annotation>
</element>
[ top ]
Element tns:WolbachiaControlMeasure / tns:wolbachiaPreReleaseLarvalSuppressionEfficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An larvicide vector control strategy that is used prior to a Wolbachia vector control strategy to increase the percentage of the population that gets infected with Wolbachia.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="wolbachiaPreReleaseLarvalSuppressionEfficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000416" type="tns:Fraction" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An larvicide vector control strategy that is used prior to a Wolbachia vector control strategy to increase the percentage of the population that gets infected with Wolbachia.</documentation>
  </annotation>
</element>
[ top ]
Element tns:LarvicideControlMeasure / tns:coverRadius
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A length measurement datum that specifies the radius of a circle that defines the geographical region in which some infectious disease control strategy will be implemented.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:coverRadius xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:coverRadius>
Source
 
<element name="coverRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000459" type="tns:Distance" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A length measurement datum that specifies the radius of a circle that defines the geographical region in which some infectious disease control strategy will be implemented.</documentation>
  </annotation>
</element>
[ top ]
Element tns:IndoorResidualSprayingVectorControlMeasure / tns:coverRadius
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:coverRadius xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:coverRadius>
Source
 
<element name="coverRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000459" type="tns:Distance" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:IndoorResidualSprayingVectorControlMeasure / tns:fractionOfVectorIndividualsAffected
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum that is the fraction of a particular adult vector population that have undergone 1) infection acquisition with a pathogen, and 2) have experienced some outcome of the resulting infection.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionOfVectorIndividualsAffected" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000437" type="tns:Fraction" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A measurement datum that is the fraction of a particular adult vector population that have undergone 1) infection acquisition with a pathogen, and 2) have experienced some outcome of the resulting infection.</documentation>
  </annotation>
</element>
[ top ]
Element tns:ContainerReductionControlMeasure / tns:coverRadius
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value apollo.tmp#Distance
Type tns:Distance
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:unitOfDistance, tns:value
Instance
 
<tns:coverRadius xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfDistance>{1,1}</tns:unitOfDistance>
  <tns:value>{1,1}</tns:value>
</tns:coverRadius>
Source
 
<element name="coverRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000459" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ContainerReductionControlMeasure / tns:fractionReductionOfEggs
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum that is the fraction of eggs laid by a particular host population that has been destroyed and thus will not develop into a new member of the population.
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionReductionOfEggs" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000438" type="tns:Fraction" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A measurement datum that is the fraction of eggs laid by a particular host population that has been destroyed and thus will not develop into a new member of the population.</documentation>
  </annotation>
</element>
[ top ]
Element tns:ContainerReductionControlMeasure / tns:fractionReductionOfLarvae
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum that is the fraction of the larval subpopulation of a particular host population that has died due to some event in the population (e.g, due to a particular control measure).
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionReductionOfLarvae" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000439" type="tns:Fraction" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A measurement datum that is the fraction of the larval subpopulation of a particular host population that has died due to some event in the population (e.g, due to a particular control measure).</documentation>
  </annotation>
</element>
[ top ]
Element tns:DecolonizationControlMeasure / tns:relapseProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="relapseProbability" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DecolonizationControlMeasure / tns:relapseInterval
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="relapseInterval" type="string"/>
[ top ]
Element tns:TravelRestrictionControlMeasure / tns:maximumTravelDistanceInKm
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="maximumTravelDistanceInKm" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000289" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TravelRestrictionControlMeasure / tns:compliance
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:compliance xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:compliance>
Source
 
<element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorTimeRange / tns:lowerBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
Source
 
<element name="lowerBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000436" type="nonNegativeInteger"/>
[ top ]
Element tns:SimulatorTimeRange / tns:upperBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
Source
 
<element name="upperBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000447" type="nonNegativeInteger"/>
[ top ]
Element tns:TimeDefinition / tns:simulatorTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type int
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="simulatorTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000069" type="int" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:TimeDefinition / tns:dateTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="dateTime" type="dateTime" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:BioticEcosystemData / tns:populations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census
Type tns:Census
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:description, tns:location, tns:referenceDate, tns:simulatorTime
Instance
 
<tns:populations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{1,1}</tns:location>
  <tns:simulatorTime>{1,1}</tns:simulatorTime>
  <tns:referenceDate>{0,1}</tns:referenceDate>
</tns:populations>
Source
 
<element name="populations" type="tns:Census" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:BioticEcosystemData / tns:households
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs unbounded
Source
 
<element name="households" type="string" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:SyntheticEcosystem / tns:date
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="dateTime" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SyntheticEcosystem / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription apollo.tmp#Location
Type tns:Location
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Instance
 
<tns:location xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:locationDefinition>{1,1}</tns:locationDefinition>
  <tns:cartesianCircleLocationDefinition>{1,1}</tns:cartesianCircleLocationDefinition>
  <tns:textualDescription>{0,1}</tns:textualDescription>
</tns:location>
Source
 
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SyntheticEcosystem / tns:populations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs unbounded
Source
 
<element name="populations" type="string" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:SyntheticEcosystem / tns:schools
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType apollo.tmp#Facility apollo.tmp#SchoolFacility_numberOfStudents apollo.tmp#SchoolFacility_units apollo.tmp#SchoolFacility
Type tns:SchoolFacility
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:facilityId, tns:facilityType, tns:numberOfStudents, tns:units
Instance
 
<tns:schools xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:facilityId>{1,1}</tns:facilityId>
  <tns:facilityType>{1,1}</tns:facilityType>
  <tns:numberOfStudents>{1,1}</tns:numberOfStudents>
  <tns:units>{1,unbounded}</tns:units>
</tns:schools>
Source
 
<element name="schools" type="tns:SchoolFacility" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Facility / tns:facilityId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that denotes some architectural structure.
Diagram
Diagram apollo.tmp#FacilityId
Type tns:FacilityId
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="facilityId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000508" type="tns:FacilityId" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that denotes some architectural structure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Facility / tns:facilityType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#FacilityTypeEnum
Type tns:FacilityTypeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration hospital
enumeration longTermCareFacility
Source
 
<element name="facilityType" type="tns:FacilityTypeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SchoolFacility / tns:numberOfStudents
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="numberOfStudents" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SchoolFacility / tns:units
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Unit_unitId apollo.tmp#Unit_unitType apollo.tmp#Unit_numberOfBeds apollo.tmp#Unit_averageLengthOfStay apollo.tmp#Unit
Type tns:Unit
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:averageLengthOfStay, tns:numberOfBeds, tns:unitId, tns:unitType
Instance
 
<tns:units xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitId>{1,1}</tns:unitId>
  <tns:unitType>{1,1}</tns:unitType>
  <tns:numberOfBeds>{0,1}</tns:numberOfBeds>
  <tns:averageLengthOfStay>{0,1}</tns:averageLengthOfStay>
</tns:units>
Source
 
<element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Unit / tns:unitId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure.
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="unitId" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000003" type="string" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Unit / tns:unitType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitEnum
Type tns:UnitEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration icu
enumeration ward
Source
 
<element name="unitType" type="tns:UnitEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Unit / tns:numberOfBeds
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="numberOfBeds" type="positiveInteger" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:Unit / tns:averageLengthOfStay
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:averageLengthOfStay xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:averageLengthOfStay>
Source
 
<element name="averageLengthOfStay" type="tns:Duration" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:SyntheticEcosystem / tns:workplaces
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType apollo.tmp#Facility
Type tns:Facility
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:facilityId, tns:facilityType
Instance
 
<tns:workplaces xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:facilityId>{1,1}</tns:facilityId>
  <tns:facilityType>{1,1}</tns:facilityType>
</tns:workplaces>
Source
 
<element name="workplaces" type="tns:Facility" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:SyntheticEcosystem / tns:healthcareFacilities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#HealthcareFacilities_healthcareFacilities apollo.tmp#HealthcareFacilities
Type tns:HealthcareFacilities
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:healthcareFacilities
Instance
 
<tns:healthcareFacilities xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:healthcareFacilities>{0,unbounded}</tns:healthcareFacilities>
</tns:healthcareFacilities>
Source
 
<element name="healthcareFacilities" type="tns:HealthcareFacilities" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:HealthcareFacilities / tns:healthcareFacilities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType apollo.tmp#Facility apollo.tmp#HealthcareFacility_numberOfBeds apollo.tmp#HealthcareFacility_fractionOfPatientsDischargedToHome apollo.tmp#HealthcareFacility_dischargePaths apollo.tmp#HealthcareFacility_dischargeDestinations apollo.tmp#HealthcareFacility_units apollo.tmp#HealthcareFacility
Type tns:HealthcareFacility
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:dischargeDestinations, tns:dischargePaths, tns:facilityId, tns:facilityType, tns:fractionOfPatientsDischargedToHome, tns:numberOfBeds, tns:units
Instance
 
<tns:healthcareFacilities xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:facilityId>{1,1}</tns:facilityId>
  <tns:facilityType>{1,1}</tns:facilityType>
  <tns:numberOfBeds>{1,1}</tns:numberOfBeds>
  <tns:fractionOfPatientsDischargedToHome>{1,1}</tns:fractionOfPatientsDischargedToHome>
  <tns:dischargePaths>{0,unbounded}</tns:dischargePaths>
  <tns:dischargeDestinations>{0,unbounded}</tns:dischargeDestinations>
  <tns:units>{1,unbounded}</tns:units>
</tns:healthcareFacilities>
Source
 
<element name="healthcareFacilities" type="tns:HealthcareFacility" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:HealthcareFacility / tns:numberOfBeds
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="numberOfBeds" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:HealthcareFacility / tns:fractionOfPatientsDischargedToHome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Fraction
Type tns:Fraction
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="fractionOfPatientsDischargedToHome" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:HealthcareFacility / tns:dischargePaths
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DischargePathAndProbability_dischargePath apollo.tmp#DischargePathAndProbability_readmissionDelayInDays apollo.tmp#DischargePathAndProbability_probability apollo.tmp#DischargePathAndProbability
Type tns:DischargePathAndProbability
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:dischargePath, tns:probability, tns:readmissionDelayInDays
Instance
 
<tns:dischargePaths xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:dischargePath>{1,1}</tns:dischargePath>
  <tns:readmissionDelayInDays>{0,1}</tns:readmissionDelayInDays>
  <tns:probability>{1,1}</tns:probability>
</tns:dischargePaths>
Source
 
<element name="dischargePaths" type="tns:DischargePathAndProbability" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:DischargePathAndProbability / tns:dischargePath
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DischargePathEnum
Type tns:DischargePathEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration dischargeToCommunityReadmitToHospital
enumeration dischargeToCommunity
enumeration dischargeToNursingHomeThenDischargeToCommunity
enumeration dischargeToNursingHomeThenReadmitToHospital
Source
 
<element name="dischargePath" type="tns:DischargePathEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DischargePathAndProbability / tns:readmissionDelayInDays
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:readmissionDelayInDays xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:readmissionDelayInDays>
Source
 
<element name="readmissionDelayInDays" type="tns:Duration" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:DischargePathAndProbability / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:HealthcareFacility / tns:dischargeDestinations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DischargeDestinationAndProbability_dischargeDestination apollo.tmp#DischargeDestinationAndProbability_probability apollo.tmp#DischargeDestinationAndProbability
Type tns:DischargeDestinationAndProbability
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:dischargeDestination, tns:probability
Instance
 
<tns:dischargeDestinations xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:dischargeDestination>{1,1}</tns:dischargeDestination>
  <tns:probability>{1,unbounded}</tns:probability>
</tns:dischargeDestinations>
Source
 
<element name="dischargeDestinations" type="tns:DischargeDestinationAndProbability" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:DischargeDestinationAndProbability / tns:dischargeDestination
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="dischargeDestination" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DischargeDestinationAndProbability / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs unbounded
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probability" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:HealthcareFacility / tns:units
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Unit_unitId apollo.tmp#Unit_unitType apollo.tmp#Unit_numberOfBeds apollo.tmp#Unit_averageLengthOfStay apollo.tmp#Unit
Type tns:Unit
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:averageLengthOfStay, tns:numberOfBeds, tns:unitId, tns:unitType
Instance
 
<tns:units xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitId>{1,1}</tns:unitId>
  <tns:unitType>{1,1}</tns:unitType>
  <tns:numberOfBeds>{0,1}</tns:numberOfBeds>
  <tns:averageLengthOfStay>{0,1}</tns:averageLengthOfStay>
</tns:units>
Source
 
<element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:ChickenProductionFacility / tns:capacity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="capacity" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ChickenProductionFacility / tns:units
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Unit_unitId apollo.tmp#Unit_unitType apollo.tmp#Unit_numberOfBeds apollo.tmp#Unit_averageLengthOfStay apollo.tmp#Unit
Type tns:Unit
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:averageLengthOfStay, tns:numberOfBeds, tns:unitId, tns:unitType
Instance
 
<tns:units xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitId>{1,1}</tns:unitId>
  <tns:unitType>{1,1}</tns:unitType>
  <tns:numberOfBeds>{0,1}</tns:numberOfBeds>
  <tns:averageLengthOfStay>{0,1}</tns:averageLengthOfStay>
</tns:units>
Source
 
<element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:HouseholdsData / tns:households
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="households" type="token" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:HouseholdsPointerToData / tns:url
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A CRID that constitutes a reference to an Internet resource.
Diagram
Diagram
Type anyURI
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="url" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMIABIS_0000019" type="anyURI" maxOccurs="unbounded" minOccurs="0">
  <annotation>
    <documentation>A CRID that constitutes a reference to an Internet resource.</documentation>
  </annotation>
</element>
[ top ]
Element tns:AbioticEcosystemData / tns:schools
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType apollo.tmp#Facility apollo.tmp#SchoolFacility_numberOfStudents apollo.tmp#SchoolFacility_units apollo.tmp#SchoolFacility
Type tns:SchoolFacility
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:facilityId, tns:facilityType, tns:numberOfStudents, tns:units
Instance
 
<tns:schools xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:facilityId>{1,1}</tns:facilityId>
  <tns:facilityType>{1,1}</tns:facilityType>
  <tns:numberOfStudents>{1,1}</tns:numberOfStudents>
  <tns:units>{1,unbounded}</tns:units>
</tns:schools>
Source
 
<element name="schools" type="tns:SchoolFacility" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:AbioticEcosystemData / tns:workplaces
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="workplaces" type="token" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:AbioticEcosystemData / tns:houses
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A material entity that has as parts one or more sites large enough to contain humans, has as part one or more material entities that separates it from other sites, and bears a residence function.
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="houses" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000074" type="string" maxOccurs="unbounded" minOccurs="0">
  <annotation>
    <documentation>A material entity that has as parts one or more sites large enough to contain humans, has as part one or more material entities that separates it from other sites, and bears a residence function.</documentation>
  </annotation>
</element>
[ top ]
Element tns:AbioticEcosystemData / tns:healthcareFacilities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType apollo.tmp#Facility apollo.tmp#HealthcareFacility_numberOfBeds apollo.tmp#HealthcareFacility_fractionOfPatientsDischargedToHome apollo.tmp#HealthcareFacility_dischargePaths apollo.tmp#HealthcareFacility_dischargeDestinations apollo.tmp#HealthcareFacility_units apollo.tmp#HealthcareFacility
Type tns:HealthcareFacility
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:dischargeDestinations, tns:dischargePaths, tns:facilityId, tns:facilityType, tns:fractionOfPatientsDischargedToHome, tns:numberOfBeds, tns:units
Instance
 
<tns:healthcareFacilities xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:facilityId>{1,1}</tns:facilityId>
  <tns:facilityType>{1,1}</tns:facilityType>
  <tns:numberOfBeds>{1,1}</tns:numberOfBeds>
  <tns:fractionOfPatientsDischargedToHome>{1,1}</tns:fractionOfPatientsDischargedToHome>
  <tns:dischargePaths>{0,unbounded}</tns:dischargePaths>
  <tns:dischargeDestinations>{0,unbounded}</tns:dischargeDestinations>
  <tns:units>{1,unbounded}</tns:units>
</tns:healthcareFacilities>
Source
 
<element name="healthcareFacilities" type="tns:HealthcareFacility" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:NamedMultiGeometry / tns:polygons
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LocationPolygon_linearRing apollo.tmp#LocationPolygon
Type tns:LocationPolygon
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:linearRing
Instance
 
<tns:polygons xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:linearRing>{1,1}</tns:linearRing>
</tns:polygons>
Source
 
<element name="polygons" type="tns:LocationPolygon" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:NamedMultiGeometry / tns:apolloLocationCode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="apolloLocationCode" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000259" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:NamedMultiGeometry / tns:textualDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="textualDescription" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Epidemic / tns:causalPathogens
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:causalPathogens xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:causalPathogens>
Source
 
<element name="causalPathogens" type="tns:ApolloPathogenCode" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Epidemic / tns:epidemicPeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EpidemicPeriod_startDate apollo.tmp#EpidemicPeriod_startDateDefinition apollo.tmp#EpidemicPeriod_startDateReferenceId apollo.tmp#EpidemicPeriod_endDate apollo.tmp#EpidemicPeriod_endDateDefinition apollo.tmp#EpidemicPeriod_endDateReferenceId apollo.tmp#EpidemicPeriod
Type tns:EpidemicPeriod
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:endDate, tns:endDateDefinition, tns:endDateReferenceId, tns:startDate, tns:startDateDefinition, tns:startDateReferenceId
Instance
 
<tns:epidemicPeriod xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:startDate>{1,1}</tns:startDate>
  <tns:startDateDefinition>{1,1}</tns:startDateDefinition>
  <tns:startDateReferenceId>{0,1}</tns:startDateReferenceId>
  <tns:endDate>{0,1}</tns:endDate>
  <tns:endDateDefinition>{0,1}</tns:endDateDefinition>
  <tns:endDateReferenceId>{0,1}</tns:endDateReferenceId>
</tns:epidemicPeriod>
Source
 
<element name="epidemicPeriod" type="tns:EpidemicPeriod" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:EpidemicPeriod / tns:startDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="startDate" type="date" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicPeriod / tns:startDateDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EpidemicPeriodStartDefinitionEnum
Type tns:EpidemicPeriodStartDefinitionEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration symptomOnsetFirstCase
enumeration firstReportedCase
enumeration dateOfFirstCaseFatality
enumeration firstLabCaseConfirmation
enumeration administrativeDeclaration
Source
 
<element name="startDateDefinition" type="tns:EpidemicPeriodStartDefinitionEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicPeriod / tns:startDateReferenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="startDateReferenceId" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:EpidemicPeriod / tns:endDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="endDate" type="date" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:EpidemicPeriod / tns:endDateDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EpidemicPeriodEndDefinitionEnum
Type tns:EpidemicPeriodEndDefinitionEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration symptomOnsetLastCase
enumeration hospitalizationLastCase
enumeration deathOfLastCase
enumeration administrativeDeclaration
enumeration lastLabCaseConfirmation
enumeration FortyTwoDaysAfterLastConfirmedCaseTestedNegativeTwice
Source
 
<element name="endDateDefinition" type="tns:EpidemicPeriodEndDefinitionEnum" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:EpidemicPeriod / tns:endDateReferenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="endDateReferenceId" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:administrativeLocations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 1
maxOccurs unbounded
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="administrativeLocations" sawsdl:modelReference="http://purl.obolibrary.org/obo/GEO_000000005" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Epidemic / tns:epidemicZones
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 0
maxOccurs unbounded
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="epidemicZones" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Epidemic / tns:infections
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Infection_pathogen apollo.tmp#Infection_host apollo.tmp#Infection_infectiousDiseases apollo.tmp#Infection_infectionAcquisitionsFromInfectedHosts apollo.tmp#Infection_infectionAcquisitionsFromContaminatedThings apollo.tmp#Infection_InfectionAcquisitionsFromColonizedHosts apollo.tmp#Infection
Type tns:Infection
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:InfectionAcquisitionsFromColonizedHosts, tns:host, tns:infectionAcquisitionsFromContaminatedThings, tns:infectionAcquisitionsFromInfectedHosts, tns:infectiousDiseases, tns:pathogen
Instance
 
<tns:infections xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:host>{1,1}</tns:host>
  <tns:infectiousDiseases>{0,unbounded}</tns:infectiousDiseases>
  <tns:infectionAcquisitionsFromInfectedHosts>{0,unbounded}</tns:infectionAcquisitionsFromInfectedHosts>
  <tns:infectionAcquisitionsFromContaminatedThings>{0,unbounded}</tns:infectionAcquisitionsFromContaminatedThings>
  <tns:InfectionAcquisitionsFromColonizedHosts>{0,unbounded}</tns:InfectionAcquisitionsFromColonizedHosts>
</tns:infections>
Source
 
<element name="infections" type="tns:Infection" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:Epidemic / tns:preEpidemicCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PreEpidemicEcosystemCensus_nameOfAdministrativeUnit apollo.tmp#PreEpidemicEcosystemCensus_numberOfPeople apollo.tmp#PreEpidemicEcosystemCensus_numberOfHouseholds apollo.tmp#PreEpidemicEcosystemCensus_numberOfSchools apollo.tmp#PreEpidemicEcosystemCensus_numberOfWorkplaces apollo.tmp#PreEpidemicEcosystemCensus_additionalDescription apollo.tmp#PreEpidemicEcosystemCensus_subLocationCensuses apollo.tmp#PreEpidemicEcosystemCensus_referenceId apollo.tmp#PreEpidemicEcosystemCensus
Type tns:PreEpidemicEcosystemCensus
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:additionalDescription, tns:nameOfAdministrativeUnit, tns:numberOfHouseholds, tns:numberOfPeople, tns:numberOfSchools, tns:numberOfWorkplaces, tns:referenceId, tns:subLocationCensuses
Instance
 
<tns:preEpidemicCensus xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:nameOfAdministrativeUnit>{0,1}</tns:nameOfAdministrativeUnit>
  <tns:numberOfPeople>{1,1}</tns:numberOfPeople>
  <tns:numberOfHouseholds>{0,1}</tns:numberOfHouseholds>
  <tns:numberOfSchools>{0,1}</tns:numberOfSchools>
  <tns:numberOfWorkplaces>{0,1}</tns:numberOfWorkplaces>
  <tns:additionalDescription>{0,1}</tns:additionalDescription>
  <tns:subLocationCensuses>{0,unbounded}</tns:subLocationCensuses>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:preEpidemicCensus>
Source
 
<element name="preEpidemicCensus" type="tns:PreEpidemicEcosystemCensus" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PreEpidemicEcosystemCensus / tns:nameOfAdministrativeUnit
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="nameOfAdministrativeUnit" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PreEpidemicEcosystemCensus / tns:numberOfPeople
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="numberOfPeople" type="integer" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PreEpidemicEcosystemCensus / tns:numberOfHouseholds
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="numberOfHouseholds" type="integer" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PreEpidemicEcosystemCensus / tns:numberOfSchools
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="numberOfSchools" type="integer" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PreEpidemicEcosystemCensus / tns:numberOfWorkplaces
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="numberOfWorkplaces" type="integer" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PreEpidemicEcosystemCensus / tns:additionalDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="additionalDescription" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PreEpidemicEcosystemCensus / tns:subLocationCensuses
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PreEpidemicEcosystemCensus_nameOfAdministrativeUnit apollo.tmp#PreEpidemicEcosystemCensus_numberOfPeople apollo.tmp#PreEpidemicEcosystemCensus_numberOfHouseholds apollo.tmp#PreEpidemicEcosystemCensus_numberOfSchools apollo.tmp#PreEpidemicEcosystemCensus_numberOfWorkplaces apollo.tmp#PreEpidemicEcosystemCensus_additionalDescription apollo.tmp#PreEpidemicEcosystemCensus_subLocationCensuses apollo.tmp#PreEpidemicEcosystemCensus_referenceId apollo.tmp#PreEpidemicEcosystemCensus
Type tns:PreEpidemicEcosystemCensus
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:additionalDescription, tns:nameOfAdministrativeUnit, tns:numberOfHouseholds, tns:numberOfPeople, tns:numberOfSchools, tns:numberOfWorkplaces, tns:referenceId, tns:subLocationCensuses
Instance
 
<tns:subLocationCensuses xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:nameOfAdministrativeUnit>{0,1}</tns:nameOfAdministrativeUnit>
  <tns:numberOfPeople>{1,1}</tns:numberOfPeople>
  <tns:numberOfHouseholds>{0,1}</tns:numberOfHouseholds>
  <tns:numberOfSchools>{0,1}</tns:numberOfSchools>
  <tns:numberOfWorkplaces>{0,1}</tns:numberOfWorkplaces>
  <tns:additionalDescription>{0,1}</tns:additionalDescription>
  <tns:subLocationCensuses>{0,unbounded}</tns:subLocationCensuses>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:subLocationCensuses>
Source
 
<element name="subLocationCensuses" type="tns:PreEpidemicEcosystemCensus" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:PreEpidemicEcosystemCensus / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:populationSerologySurveys
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PopulationSerologySurvey_speciesSampled apollo.tmp#PopulationSerologySurvey_speciesSampledNcbiTaxonId apollo.tmp#PopulationSerologySurvey_numberSampled apollo.tmp#PopulationSerologySurvey_whereSampled apollo.tmp#PopulationSerologySurvey_testName apollo.tmp#PopulationSerologySurvey_testLoincId apollo.tmp#PopulationSerologySurvey_numberOfSamplesPositive apollo.tmp#PopulationSerologySurvey_referenceId apollo.tmp#PopulationSerologySurvey
Type tns:PopulationSerologySurvey
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:numberOfSamplesPositive, tns:numberSampled, tns:referenceId, tns:speciesSampled, tns:speciesSampledNcbiTaxonId, tns:testLoincId, tns:testName, tns:whereSampled
Instance
 
<tns:populationSerologySurveys xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:speciesSampled>{1,1}</tns:speciesSampled>
  <tns:speciesSampledNcbiTaxonId>{1,1}</tns:speciesSampledNcbiTaxonId>
  <tns:numberSampled>{1,1}</tns:numberSampled>
  <tns:whereSampled>{0,1}</tns:whereSampled>
  <tns:testName>{0,1}</tns:testName>
  <tns:testLoincId>{0,1}</tns:testLoincId>
  <tns:numberOfSamplesPositive>{0,1}</tns:numberOfSamplesPositive>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:populationSerologySurveys>
Source
 
<element name="populationSerologySurveys" type="tns:PopulationSerologySurvey" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:PopulationSerologySurvey / tns:speciesSampled
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="speciesSampled" type="token" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationSerologySurvey / tns:speciesSampledNcbiTaxonId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesSampledNcbiTaxonId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationSerologySurvey / tns:numberSampled
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="numberSampled" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationSerologySurvey / tns:whereSampled
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="whereSampled" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000520" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PopulationSerologySurvey / tns:testName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="testName" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PopulationSerologySurvey / tns:testLoincId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LoincId
Type tns:LoincId
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
pattern [0-9]{5}-[0-9]{1}
Source
 
<element name="testLoincId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000494" type="tns:LoincId" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PopulationSerologySurvey / tns:numberOfSamplesPositive
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="numberOfSamplesPositive" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PopulationSerologySurvey / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:populationInfectionSurveys
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PopulationInfectionSurvey_speciesSampled apollo.tmp#PopulationInfectionSurvey_speciesSampledNcbiTaxonId apollo.tmp#PopulationInfectionSurvey_numberSampled apollo.tmp#PopulationInfectionSurvey_whereSampled apollo.tmp#PopulationInfectionSurvey_testName apollo.tmp#PopulationInfectionSurvey_testLoincId apollo.tmp#PopulationInfectionSurvey_numberOfSamplesPositive apollo.tmp#PopulationInfectionSurvey_referenceId apollo.tmp#PopulationInfectionSurvey
Type tns:PopulationInfectionSurvey
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:numberOfSamplesPositive, tns:numberSampled, tns:referenceId, tns:speciesSampled, tns:speciesSampledNcbiTaxonId, tns:testLoincId, tns:testName, tns:whereSampled
Instance
 
<tns:populationInfectionSurveys xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:speciesSampled>{1,1}</tns:speciesSampled>
  <tns:speciesSampledNcbiTaxonId>{1,1}</tns:speciesSampledNcbiTaxonId>
  <tns:numberSampled>{1,1}</tns:numberSampled>
  <tns:whereSampled>{0,1}</tns:whereSampled>
  <tns:testName>{0,1}</tns:testName>
  <tns:testLoincId>{0,1}</tns:testLoincId>
  <tns:numberOfSamplesPositive>{0,1}</tns:numberOfSamplesPositive>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:populationInfectionSurveys>
Source
 
<element name="populationInfectionSurveys" type="tns:PopulationInfectionSurvey" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:PopulationInfectionSurvey / tns:speciesSampled
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="speciesSampled" type="token" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationInfectionSurvey / tns:speciesSampledNcbiTaxonId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesSampledNcbiTaxonId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationInfectionSurvey / tns:numberSampled
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="numberSampled" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PopulationInfectionSurvey / tns:whereSampled
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A geographic region that contains a sampling process.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="whereSampled" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000520" type="token" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A geographic region that contains a sampling process.</documentation>
  </annotation>
</element>
[ top ]
Element tns:PopulationInfectionSurvey / tns:testName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="testName" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PopulationInfectionSurvey / tns:testLoincId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A LOINC identifier that refers to some clinical laboratory test conducted in a particular context..
Diagram
Diagram apollo.tmp#LoincId
Type tns:LoincId
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
pattern [0-9]{5}-[0-9]{1}
Source
 
<element name="testLoincId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000494" type="tns:LoincId" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A LOINC identifier that refers to some clinical laboratory test conducted in a particular context..</documentation>
  </annotation>
</element>
[ top ]
Element tns:PopulationInfectionSurvey / tns:numberOfSamplesPositive
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="numberOfSamplesPositive" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:PopulationInfectionSurvey / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:infectiousDiseaseControlStrategies
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure
Type tns:InfectiousDiseaseControlMeasure
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Instance
 
<tns:infectiousDiseaseControlStrategies xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{0,1}</tns:location>
  <tns:controlMeasureStartTime>{1,unbounded}</tns:controlMeasureStartTime>
  <tns:controlMeasureStopTime>{0,unbounded}</tns:controlMeasureStopTime>
  <tns:controlMeasureResponseDelay>{1,1}</tns:controlMeasureResponseDelay>
  <tns:controlMeasureStandDownDelay>{1,1}</tns:controlMeasureStandDownDelay>
  <tns:logisticalSystems>{0,unbounded}</tns:logisticalSystems>
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>{0,unbounded}</tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>
</tns:infectiousDiseaseControlStrategies>
Source
 
<element name="infectiousDiseaseControlStrategies" type="tns:InfectiousDiseaseControlMeasure" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:caseDefinitions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#CaseDefinition_apolloLabel apollo.tmp#CaseDefinition_investigationLabel apollo.tmp#CaseDefinition_investigationDefinition apollo.tmp#CaseDefinition_referenceId apollo.tmp#CaseDefinition
Type tns:CaseDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:apolloLabel, tns:investigationDefinition, tns:investigationLabel, tns:referenceId
Instance
 
<tns:caseDefinitions xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLabel>{1,1}</tns:apolloLabel>
  <tns:investigationLabel>{1,1}</tns:investigationLabel>
  <tns:investigationDefinition>{1,1}</tns:investigationDefinition>
  <tns:referenceId>{1,1}</tns:referenceId>
</tns:caseDefinitions>
Source
 
<element name="caseDefinitions" type="tns:CaseDefinition" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:CaseDefinition / tns:apolloLabel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseDefinitionEnum
Type tns:CaseDefinitionEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration case
enumeration confirmedCase
enumeration probableCase
enumeration suspectedCase
enumeration neonatalCase
enumeration epidemiologicallyLinkedCase
enumeration fatalCase
enumeration alertCase
enumeration autochthonousCase
enumeration importedCase
Source
 
<element name="apolloLabel" type="tns:CaseDefinitionEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:CaseDefinition / tns:investigationLabel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A CRID symbol used to identify an investigation.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="investigationLabel" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001628" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A CRID symbol used to identify an investigation.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseDefinition / tns:investigationDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A textual entity that describes an investigation.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="investigationDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001615" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A textual entity that describes an investigation.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseDefinition / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:Epidemic / tns:contactDefinitions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactDefinition_apolloLabel apollo.tmp#ContactDefinition_investigationLabel apollo.tmp#ContactDefinition_investigationDefinition apollo.tmp#ContactDefinition_referenceId apollo.tmp#ContactDefinition
Type tns:ContactDefinition
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:apolloLabel, tns:investigationDefinition, tns:investigationLabel, tns:referenceId
Instance
 
<tns:contactDefinitions xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLabel>{1,1}</tns:apolloLabel>
  <tns:investigationLabel>{1,1}</tns:investigationLabel>
  <tns:investigationDefinition>{1,1}</tns:investigationDefinition>
  <tns:referenceId>{1,1}</tns:referenceId>
</tns:contactDefinitions>
Source
 
<element name="contactDefinitions" type="tns:ContactDefinition" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Epidemic / tns:caseLists
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseList_speciesOfCases apollo.tmp#CaseList_caseRecords apollo.tmp#CaseList
Type tns:CaseList
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:caseRecords, tns:speciesOfCases
Instance
 
<tns:caseLists xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:speciesOfCases>{1,1}</tns:speciesOfCases>
  <tns:caseRecords>{1,unbounded}</tns:caseRecords>
</tns:caseLists>
Source
 
<element name="caseLists" type="tns:CaseList" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:CaseList / tns:speciesOfCases
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesOfCases" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:CaseList / tns:caseRecords
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseRecord_caseId apollo.tmp#CaseRecord_ageInYears apollo.tmp#CaseRecord_sex apollo.tmp#CaseRecord_race apollo.tmp#CaseRecord_occupations apollo.tmp#CaseRecord_placesVisitedWhileSusceptibleOrInfectious apollo.tmp#CaseRecord_infectionAcquiredFromCaseId apollo.tmp#CaseRecord_diseaseOutcomesWithLocationDateTime apollo.tmp#CaseRecord_labTestsAndResults apollo.tmp#CaseRecord_pathogenGeneSequence apollo.tmp#CaseRecord_references apollo.tmp#CaseRecord_caseClassification apollo.tmp#CaseRecord_location apollo.tmp#CaseRecord_caseDefinition apollo.tmp#CaseRecord_causalPathogen apollo.tmp#CaseRecord_treatment apollo.tmp#CaseRecord_infectionSource apollo.tmp#CaseRecord_controlMeasures apollo.tmp#CaseRecord
Type tns:CaseRecord
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:ageInYears, tns:caseClassification, tns:caseDefinition, tns:caseId, tns:causalPathogen, tns:controlMeasures, tns:diseaseOutcomesWithLocationDateTime, tns:infectionAcquiredFromCaseId, tns:infectionSource, tns:labTestsAndResults, tns:location, tns:occupations, tns:pathogenGeneSequence, tns:placesVisitedWhileSusceptibleOrInfectious, tns:race, tns:references, tns:sex, tns:treatment
Instance
 
<tns:caseRecords xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:caseId>{1,1}</tns:caseId>
  <tns:ageInYears>{0,1}</tns:ageInYears>
  <tns:sex>{0,1}</tns:sex>
  <tns:race>{0,unbounded}</tns:race>
  <tns:occupations>{0,unbounded}</tns:occupations>
  <tns:placesVisitedWhileSusceptibleOrInfectious>{0,unbounded}</tns:placesVisitedWhileSusceptibleOrInfectious>
  <tns:infectionAcquiredFromCaseId>{0,1}</tns:infectionAcquiredFromCaseId>
  <tns:diseaseOutcomesWithLocationDateTime>{0,unbounded}</tns:diseaseOutcomesWithLocationDateTime>
  <tns:labTestsAndResults>{0,unbounded}</tns:labTestsAndResults>
  <tns:pathogenGeneSequence>{0,1}</tns:pathogenGeneSequence>
  <tns:references>{0,unbounded}</tns:references>
  <tns:caseClassification>{0,1}</tns:caseClassification>
  <tns:location>{0,unbounded}</tns:location>
  <tns:caseDefinition>{0,1}</tns:caseDefinition>
  <tns:causalPathogen>{0,1}</tns:causalPathogen>
  <tns:treatment>{0,unbounded}</tns:treatment>
  <tns:infectionSource>{0,unbounded}</tns:infectionSource>
  <tns:controlMeasures>{0,unbounded}</tns:controlMeasures>
</tns:caseRecords>
Source
 
<element name="caseRecords" type="tns:CaseRecord" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:CaseRecord / tns:caseId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that denotes an organism included in some infection case count.
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="caseId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000510" type="token" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that denotes an organism included in some infection case count.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseRecord / tns:ageInYears
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A time measurement datum that refers to the temporal interval occupied by the life course of some organism and that takes 'years' as its measurement unit label.
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="ageInYears" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000504" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A time measurement datum that refers to the temporal interval occupied by the life course of some organism and that takes 'years' as its measurement unit label.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseRecord / tns:sex
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GenderEnum
Type tns:GenderEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration M
enumeration F
enumeration U
Source
 
<element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:race
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A racial identity is an information content entity that is the output of some racial identitification process and is intended to be a truthful statement about the genetic or cultural race of a person. Unlike data items they are not necessilary contributed or acquired by a reliable method.
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="race" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000098" type="string" maxOccurs="unbounded" minOccurs="0">
  <annotation>
    <documentation>A racial identity is an information content entity that is the output of some racial identitification process and is intended to be a truthful statement about the genetic or cultural race of a person. Unlike data items they are not necessilary contributed or acquired by a reliable method.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseRecord / tns:occupations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#OccupationEnum
Type tns:OccupationEnum
Properties
content simple
minOccurs 0
maxOccurs unbounded
Facets
enumeration storekeeper
enumeration merchant
enumeration nurse
enumeration hospitalMessenger
Source
 
<element name="occupations" type="tns:OccupationEnum" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:placesVisitedWhileSusceptibleOrInfectious
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PlaceVisited_place apollo.tmp#PlaceVisited_namedMultiGeometry apollo.tmp#PlaceVisited_frequencyOfVisits apollo.tmp#PlaceVisited_datesOfVisits apollo.tmp#PlaceVisited_realDateSpansOfVisits apollo.tmp#PlaceVisited_realTimeSpansOfVisits apollo.tmp#PlaceVisited
Type tns:PlaceVisited
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:datesOfVisits, tns:frequencyOfVisits, tns:namedMultiGeometry, tns:place, tns:realDateSpansOfVisits, tns:realTimeSpansOfVisits
Instance
 
<tns:placesVisitedWhileSusceptibleOrInfectious xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:place>{1,1}</tns:place>
  <tns:namedMultiGeometry>{1,1}</tns:namedMultiGeometry>
  <tns:frequencyOfVisits>{0,1}</tns:frequencyOfVisits>
  <tns:datesOfVisits>{0,unbounded}</tns:datesOfVisits>
  <tns:realDateSpansOfVisits>{0,unbounded}</tns:realDateSpansOfVisits>
  <tns:realTimeSpansOfVisits>{0,unbounded}</tns:realTimeSpansOfVisits>
</tns:placesVisitedWhileSusceptibleOrInfectious>
Source
 
<element name="placesVisitedWhileSusceptibleOrInfectious" type="tns:PlaceVisited" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:PlaceVisited / tns:place
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PlaceEnum
Type tns:PlaceEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration allSchools
enumeration allSchoolsOfOneLevelInOneTract
enumeration workplace
enumeration nzaraCottonFactory
enumeration home
Source
 
<element name="place" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000062" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PlaceVisited / tns:namedMultiGeometry
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NamedMultiGeometry_polygons apollo.tmp#NamedMultiGeometry_apolloLocationCode apollo.tmp#NamedMultiGeometry_textualDescription apollo.tmp#NamedMultiGeometry
Type tns:NamedMultiGeometry
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:apolloLocationCode, tns:polygons, tns:textualDescription
Instance
 
<tns:namedMultiGeometry xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:polygons>{1,unbounded}</tns:polygons>
  <tns:apolloLocationCode>{1,1}</tns:apolloLocationCode>
  <tns:textualDescription>{1,1}</tns:textualDescription>
</tns:namedMultiGeometry>
Source
 
<element name="namedMultiGeometry" type="tns:NamedMultiGeometry" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PlaceVisited / tns:frequencyOfVisits
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:frequencyOfVisits xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:frequencyOfVisits>
Source
 
<element name="frequencyOfVisits" type="tns:Rate" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:PlaceVisited / tns:datesOfVisits
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="datesOfVisits" type="date" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:PlaceVisited / tns:realDateSpansOfVisits
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#RealDateSpanCategoryDefinition_offsetFromUtcInHours apollo.tmp#RealDateSpanCategoryDefinition_firstDay apollo.tmp#RealDateSpanCategoryDefinition_lastDay apollo.tmp#RealDateSpanCategoryDefinition
Type tns:RealDateSpanCategoryDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:firstDay, tns:lastDay, tns:offsetFromUtcInHours
Instance
 
<tns:realDateSpansOfVisits xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:offsetFromUtcInHours>{0,1}</tns:offsetFromUtcInHours>
  <tns:firstDay>{1,1}</tns:firstDay>
  <tns:lastDay>{1,1}</tns:lastDay>
</tns:realDateSpansOfVisits>
Source
 
<element name="realDateSpansOfVisits" type="tns:RealDateSpanCategoryDefinition" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:RealDateSpanCategoryDefinition / tns:offsetFromUtcInHours
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:RealDateSpanCategoryDefinition / tns:firstDay
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="firstDay" type="date" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:RealDateSpanCategoryDefinition / tns:lastDay
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="lastDay" type="date" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:PlaceVisited / tns:realTimeSpansOfVisits
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#RealTimeSpanCategoryDefinition_offsetFromUtcInHours apollo.tmp#RealTimeSpanCategoryDefinition_beginningTime apollo.tmp#RealTimeSpanCategoryDefinition_endingTime apollo.tmp#RealTimeSpanCategoryDefinition
Type tns:RealTimeSpanCategoryDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:beginningTime, tns:endingTime, tns:offsetFromUtcInHours
Instance
 
<tns:realTimeSpansOfVisits xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:offsetFromUtcInHours>{1,1}</tns:offsetFromUtcInHours>
  <tns:beginningTime>{1,1}</tns:beginningTime>
  <tns:endingTime>{1,1}</tns:endingTime>
</tns:realTimeSpansOfVisits>
Source
 
<element name="realTimeSpansOfVisits" type="tns:RealTimeSpanCategoryDefinition" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:RealTimeSpanCategoryDefinition / tns:offsetFromUtcInHours
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:RealTimeSpanCategoryDefinition / tns:beginningTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="beginningTime" type="dateTime" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:RealTimeSpanCategoryDefinition / tns:endingTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="endingTime" type="dateTime" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CaseRecord / tns:infectionAcquiredFromCaseId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="infectionAcquiredFromCaseId" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:diseaseOutcomesWithLocationDateTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeWithLocationDateTime_diseaseOutcome apollo.tmp#DiseaseOutcomeWithLocationDateTime_dateTime apollo.tmp#DiseaseOutcomeWithLocationDateTime_place apollo.tmp#DiseaseOutcomeWithLocationDateTime_locationCode apollo.tmp#DiseaseOutcomeWithLocationDateTime_latLongPair apollo.tmp#DiseaseOutcomeWithLocationDateTime
Type tns:DiseaseOutcomeWithLocationDateTime
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:dateTime, tns:diseaseOutcome, tns:latLongPair, tns:locationCode, tns:place
Instance
 
<tns:diseaseOutcomesWithLocationDateTime xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:diseaseOutcome>{1,1}</tns:diseaseOutcome>
  <tns:dateTime>{0,1}</tns:dateTime>
  <tns:place>{0,1}</tns:place>
  <tns:locationCode>{1,1}</tns:locationCode>
  <tns:latLongPair>{1,1}</tns:latLongPair>
</tns:diseaseOutcomesWithLocationDateTime>
Source
 
<element name="diseaseOutcomesWithLocationDateTime" type="tns:DiseaseOutcomeWithLocationDateTime" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:DiseaseOutcomeWithLocationDateTime / tns:diseaseOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="diseaseOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000204" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseOutcomeWithLocationDateTime / tns:dateTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="dateTime" type="dateTime" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:DiseaseOutcomeWithLocationDateTime / tns:place
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An architectural structure that bears some function.
Diagram
Diagram apollo.tmp#PlaceEnum
Type tns:PlaceEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration allSchools
enumeration allSchoolsOfOneLevelInOneTract
enumeration workplace
enumeration nzaraCottonFactory
enumeration home
Source
 
<element name="place" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000062" type="tns:PlaceEnum" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An architectural structure that bears some function.</documentation>
  </annotation>
</element>
[ top ]
Element tns:DiseaseOutcomeWithLocationDateTime / tns:locationCode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="locationCode" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DiseaseOutcomeWithLocationDateTime / tns:latLongPair
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LatLongPair_latitutde apollo.tmp#LatLongPair_longitude apollo.tmp#LatLongPair
Type tns:LatLongPair
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:latitutde, tns:longitude
Instance
 
<tns:latLongPair xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:latitutde>{1,1}</tns:latitutde>
  <tns:longitude>{1,1}</tns:longitude>
</tns:latLongPair>
Source
 
<element name="latLongPair" type="tns:LatLongPair" minOccurs="1" maxOccurs="1"/>
[ top ]
Element tns:LatLongPair / tns:latitutde
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Latitude
Type tns:Latitude
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 90
minInclusive -90
Source
 
<element name="latitutde" type="tns:Latitude" minOccurs="1" maxOccurs="1"/>
[ top ]
Element tns:LatLongPair / tns:longitude
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Longitude
Type tns:Longitude
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 180
minInclusive -180
Source
 
<element name="longitude" type="tns:Longitude" minOccurs="1" maxOccurs="1"/>
[ top ]
Element tns:CaseRecord / tns:labTestsAndResults
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LabTestAndResult_textualName apollo.tmp#LabTestAndResult_loincCode apollo.tmp#LabTestAndResult_sampleDate apollo.tmp#LabTestAndResult_result apollo.tmp#LabTestAndResult
Type tns:LabTestAndResult
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:loincCode, tns:result, tns:sampleDate, tns:textualName
Instance
 
<tns:labTestsAndResults xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:textualName>{1,1}</tns:textualName>
  <tns:loincCode>{1,1}</tns:loincCode>
  <tns:sampleDate>{0,1}</tns:sampleDate>
  <tns:result>{0,1}</tns:result>
</tns:labTestsAndResults>
Source
 
<element name="labTestsAndResults" type="tns:LabTestAndResult" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:LabTestAndResult / tns:textualName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="textualName" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:LabTestAndResult / tns:loincCode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LoincId
Type tns:LoincId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]{5}-[0-9]{1}
Source
 
<element name="loincCode" type="tns:LoincId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:LabTestAndResult / tns:sampleDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="sampleDate" type="dateTime" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:LabTestAndResult / tns:result
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="result" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:pathogenGeneSequence
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="pathogenGeneSequence" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:references
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Reference_id apollo.tmp#Reference_title apollo.tmp#Reference_authors apollo.tmp#Reference_publication apollo.tmp#Reference_url apollo.tmp#Reference_pubMedId apollo.tmp#Reference_orcId apollo.tmp#Reference_obcIdeId apollo.tmp#Reference
Type tns:Reference
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:authors, tns:id, tns:obcIdeId, tns:orcId, tns:pubMedId, tns:publication, tns:title, tns:url
Instance
 
<tns:references xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:id>{1,1}</tns:id>
  <tns:title>{1,1}</tns:title>
  <tns:authors>{0,1}</tns:authors>
  <tns:publication>{0,1}</tns:publication>
  <tns:url>{1,1}</tns:url>
  <tns:pubMedId>{0,1}</tns:pubMedId>
  <tns:orcId>{0,1}</tns:orcId>
  <tns:obcIdeId>{0,1}</tns:obcIdeId>
</tns:references>
Source
 
<element name="references" type="tns:Reference" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Reference / tns:id
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="id" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Reference / tns:title
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="title" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Reference / tns:authors
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="authors" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000321" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Reference / tns:publication
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="publication" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000311" type="string" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:Reference / tns:url
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type anyURI
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="url" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMIABIS_0000019" type="anyURI" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:Reference / tns:pubMedId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by the United States National Library of Medicine and National Institutes of Health that denotes some publication record in the MEDLINE database.
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="pubMedId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000495" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An identifier curated by the United States National Library of Medicine and National Institutes of Health that denotes some publication record in the MEDLINE database.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Reference / tns:orcId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by ORCID, Inc. to denote some academic author.
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="orcId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000496" type="string" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>An identifier curated by ORCID, Inc. to denote some academic author.</documentation>
  </annotation>
</element>
[ top ]
Element tns:Reference / tns:obcIdeId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="obcIdeId" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:caseClassification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="caseClassification" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 0
maxOccurs unbounded
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="location" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:caseDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#CaseDefinition_apolloLabel apollo.tmp#CaseDefinition_investigationLabel apollo.tmp#CaseDefinition_investigationDefinition apollo.tmp#CaseDefinition_referenceId apollo.tmp#CaseDefinition
Type tns:CaseDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:apolloLabel, tns:investigationDefinition, tns:investigationLabel, tns:referenceId
Instance
 
<tns:caseDefinition xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLabel>{1,1}</tns:apolloLabel>
  <tns:investigationLabel>{1,1}</tns:investigationLabel>
  <tns:investigationDefinition>{1,1}</tns:investigationDefinition>
  <tns:referenceId>{1,1}</tns:referenceId>
</tns:caseDefinition>
Source
 
<element name="caseDefinition" type="tns:CaseDefinition" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:causalPathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:causalPathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:causalPathogen>
Source
 
<element name="causalPathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:treatment
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Treatment_description apollo.tmp#Treatment_speciesOfTreatedOrganism apollo.tmp#Treatment_pathogen apollo.tmp#Treatment_numDosesInTreatmentCourse apollo.tmp#Treatment_durationOfTreatmentCourse apollo.tmp#Treatment_treatmentContraindications apollo.tmp#Treatment
Type tns:Treatment
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:description, tns:durationOfTreatmentCourse, tns:numDosesInTreatmentCourse, tns:pathogen, tns:speciesOfTreatedOrganism, tns:treatmentContraindications
Instance
 
<tns:treatment xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:speciesOfTreatedOrganism>{1,1}</tns:speciesOfTreatedOrganism>
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:numDosesInTreatmentCourse>{1,1}</tns:numDosesInTreatmentCourse>
  <tns:durationOfTreatmentCourse>{1,1}</tns:durationOfTreatmentCourse>
  <tns:treatmentContraindications>{0,unbounded}</tns:treatmentContraindications>
</tns:treatment>
Source
 
<element name="treatment" type="tns:Treatment" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:infectionSource
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionSource_infectionSourceCode apollo.tmp#InfectionSource_infectionSourceAdditionalDescription apollo.tmp#InfectionSource_infectionSourceDate apollo.tmp#InfectionSource
Type tns:InfectionSource
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:infectionSourceAdditionalDescription, tns:infectionSourceCode, tns:infectionSourceDate
Instance
 
<tns:infectionSource xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:infectionSourceCode>{0,1}</tns:infectionSourceCode>
  <tns:infectionSourceAdditionalDescription>{0,unbounded}</tns:infectionSourceAdditionalDescription>
  <tns:infectionSourceDate>{0,unbounded}</tns:infectionSourceDate>
</tns:infectionSource>
Source
 
<element name="infectionSource" type="tns:InfectionSource" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:InfectionSource / tns:infectionSourceCode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="infectionSourceCode" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:InfectionSource / tns:infectionSourceAdditionalDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="infectionSourceAdditionalDescription" type="token" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:InfectionSource / tns:infectionSourceDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type dateTime
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="infectionSourceDate" type="dateTime" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:CaseRecord / tns:controlMeasures
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure
Type tns:InfectiousDiseaseControlMeasure
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Instance
 
<tns:controlMeasures xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{0,1}</tns:location>
  <tns:controlMeasureStartTime>{1,unbounded}</tns:controlMeasureStartTime>
  <tns:controlMeasureStopTime>{0,unbounded}</tns:controlMeasureStopTime>
  <tns:controlMeasureResponseDelay>{1,1}</tns:controlMeasureResponseDelay>
  <tns:controlMeasureStandDownDelay>{1,1}</tns:controlMeasureStandDownDelay>
  <tns:logisticalSystems>{0,unbounded}</tns:logisticalSystems>
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>{0,unbounded}</tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>
</tns:controlMeasures>
Source
 
<element name="controlMeasures" type="tns:InfectiousDiseaseControlMeasure" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:epidemicCaseCounts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#EpidemicCaseCounts_totalCaseCount apollo.tmp#EpidemicCaseCounts_totalFatalCaseCount apollo.tmp#EpidemicCaseCounts_otherCaseCounts apollo.tmp#EpidemicCaseCounts
Type tns:EpidemicCaseCounts
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:otherCaseCounts, tns:totalCaseCount, tns:totalFatalCaseCount
Instance
 
<tns:epidemicCaseCounts xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:totalCaseCount>{0,1}</tns:totalCaseCount>
  <tns:totalFatalCaseCount>{0,1}</tns:totalFatalCaseCount>
  <tns:otherCaseCounts>{0,unbounded}</tns:otherCaseCounts>
</tns:epidemicCaseCounts>
Source
 
<element name="epidemicCaseCounts" type="tns:EpidemicCaseCounts" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:EpidemicCaseCounts / tns:totalCaseCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that is the output of some infection case count.
Diagram
Diagram apollo.tmp#CaseCount_countTitle apollo.tmp#CaseCount_caseDefinitionsIncluded apollo.tmp#CaseCount_caseCountArrayDescription apollo.tmp#CaseCount_totalCount apollo.tmp#CaseCount_caseCountArray apollo.tmp#CaseCount_temporalCountArrayWithUniformIntervals apollo.tmp#CaseCount_referenceId apollo.tmp#CaseCount
Type tns:CaseCount
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:caseCountArray, tns:caseCountArrayDescription, tns:caseDefinitionsIncluded, tns:countTitle, tns:referenceId, tns:temporalCountArrayWithUniformIntervals, tns:totalCount
Instance
 
<tns:totalCaseCount xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:countTitle>{1,1}</tns:countTitle>
  <tns:caseDefinitionsIncluded>{1,unbounded}</tns:caseDefinitionsIncluded>
  <tns:caseCountArrayDescription>{1,1}</tns:caseCountArrayDescription>
  <tns:totalCount>{1,1}</tns:totalCount>
  <tns:caseCountArray>{1,1}</tns:caseCountArray>
  <tns:temporalCountArrayWithUniformIntervals>{1,1}</tns:temporalCountArrayWithUniformIntervals>
  <tns:referenceId>{1,1}</tns:referenceId>
</tns:totalCaseCount>
Source
 
<element name="totalCaseCount" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000569" type="tns:CaseCount" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A data item that is the output of some infection case count.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseCount / tns:countTitle
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="countTitle" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CaseCount / tns:caseDefinitionsIncluded
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseDefinitionEnum
Type tns:CaseDefinitionEnum
Properties
content simple
minOccurs 1
maxOccurs unbounded
Facets
enumeration case
enumeration confirmedCase
enumeration probableCase
enumeration suspectedCase
enumeration neonatalCase
enumeration epidemiologicallyLinkedCase
enumeration fatalCase
enumeration alertCase
enumeration autochthonousCase
enumeration importedCase
Source
 
<element name="caseDefinitionsIncluded" type="tns:CaseDefinitionEnum" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:CaseCount / tns:caseCountArrayDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseCountArrayDescription_caseCountArrayType apollo.tmp#CaseCountArrayDescription_startDateOfDataSeries apollo.tmp#CaseCountArrayDescription_resetDates apollo.tmp#CaseCountArrayDescription_dateSpansWithNoDataCollection apollo.tmp#CaseCountArrayDescription
Type tns:CaseCountArrayDescription
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:caseCountArrayType, tns:dateSpansWithNoDataCollection, tns:resetDates, tns:startDateOfDataSeries
Instance
 
<tns:caseCountArrayDescription xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:caseCountArrayType>{1,1}</tns:caseCountArrayType>
  <tns:startDateOfDataSeries>{1,1}</tns:startDateOfDataSeries>
  <tns:resetDates>{0,unbounded}</tns:resetDates>
  <tns:dateSpansWithNoDataCollection>{0,unbounded}</tns:dateSpansWithNoDataCollection>
</tns:caseCountArrayDescription>
Source
 
<element name="caseCountArrayDescription" type="tns:CaseCountArrayDescription" minOccurs="1" maxOccurs="1"/>
[ top ]
Element tns:CaseCountArrayDescription / tns:caseCountArrayType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseCountArrayTypeEnum
Type tns:CaseCountArrayTypeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration resetTo0
enumeration resetTo0AndTurnOffDataCollection
enumeration resetTo0AndTurnBackOnDataCollection
enumeration mutuallyExclusiveWithConstantLengthIntervals
enumeration mutuallyExclusiveWithVaryingLengthIntervals
enumeration cumulativeWithoutResets
enumeration cumulativeWithResets
enumeration inconclusive
Source
 
<element name="caseCountArrayType" type="tns:CaseCountArrayTypeEnum" minOccurs="1" maxOccurs="1"/>
[ top ]
Element tns:CaseCountArrayDescription / tns:startDateOfDataSeries
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="startDateOfDataSeries" type="date" minOccurs="1" maxOccurs="1"/>
[ top ]
Element tns:CaseCountArrayDescription / tns:resetDates
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="resetDates" type="date" minOccurs="0" maxOccurs="unbounded"/>
[ top ]
Element tns:CaseCountArrayDescription / tns:dateSpansWithNoDataCollection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#RealDateSpanCategoryDefinition_offsetFromUtcInHours apollo.tmp#RealDateSpanCategoryDefinition_firstDay apollo.tmp#RealDateSpanCategoryDefinition_lastDay apollo.tmp#RealDateSpanCategoryDefinition
Type tns:RealDateSpanCategoryDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:firstDay, tns:lastDay, tns:offsetFromUtcInHours
Instance
 
<tns:dateSpansWithNoDataCollection xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:offsetFromUtcInHours>{0,1}</tns:offsetFromUtcInHours>
  <tns:firstDay>{1,1}</tns:firstDay>
  <tns:lastDay>{1,1}</tns:lastDay>
</tns:dateSpansWithNoDataCollection>
Source
 
<element name="dateSpansWithNoDataCollection" type="tns:RealDateSpanCategoryDefinition" minOccurs="0" maxOccurs="unbounded"/>
[ top ]
Element tns:CaseCount / tns:totalCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="totalCount" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CaseCount / tns:caseCountArray
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VariableCategoryValueTree_nVariables apollo.tmp#VariableCategoryValueTree_rootVariableNode apollo.tmp#VariableCategoryValueTree
Type tns:VariableCategoryValueTree
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:nVariables, tns:rootVariableNode
Instance
 
<tns:caseCountArray xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:nVariables>{0,1}</tns:nVariables>
  <tns:rootVariableNode>{1,1}</tns:rootVariableNode>
</tns:caseCountArray>
Source
 
<element name="caseCountArray" type="tns:VariableCategoryValueTree" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CaseCount / tns:temporalCountArrayWithUniformIntervals
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TemporalCountArrayWithUniformIntervals_nDimensions apollo.tmp#TemporalCountArrayWithUniformIntervals_nTemporalIntervals apollo.tmp#TemporalCountArrayWithUniformIntervals_firstArrayAxis apollo.tmp#TemporalCountArrayWithUniformIntervals
Type tns:TemporalCountArrayWithUniformIntervals
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:firstArrayAxis, tns:nDimensions, tns:nTemporalIntervals
Instance
 
<tns:temporalCountArrayWithUniformIntervals xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:nDimensions>{0,1}</tns:nDimensions>
  <tns:nTemporalIntervals>{1,1}</tns:nTemporalIntervals>
  <tns:firstArrayAxis>{1,1}</tns:firstArrayAxis>
</tns:temporalCountArrayWithUniformIntervals>
Source
 
<element name="temporalCountArrayWithUniformIntervals" type="tns:TemporalCountArrayWithUniformIntervals" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:TemporalCountArrayWithUniformIntervals / tns:nDimensions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="nDimensions" type="positiveInteger" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:TemporalCountArrayWithUniformIntervals / tns:nTemporalIntervals
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="nTemporalIntervals" type="string"/>
[ top ]
Element tns:TemporalCountArrayWithUniformIntervals / tns:firstArrayAxis
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoricalVariableNode_name apollo.tmp#CategoricalVariableNode_categories apollo.tmp#CategoricalVariableNode
Type tns:CategoricalVariableNode
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:categories, tns:name
Instance
 
<tns:firstArrayAxis xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:name>{1,1}</tns:name>
  <tns:categories>{1,unbounded}</tns:categories>
</tns:firstArrayAxis>
Source
 
<element name="firstArrayAxis" type="tns:CategoricalVariableNode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CaseCount / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicCaseCounts / tns:totalFatalCaseCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that is the output of some infection case count and that represents the number of infectious disease cases that ended in death.
Diagram
Diagram apollo.tmp#CaseCount_countTitle apollo.tmp#CaseCount_caseDefinitionsIncluded apollo.tmp#CaseCount_caseCountArrayDescription apollo.tmp#CaseCount_totalCount apollo.tmp#CaseCount_caseCountArray apollo.tmp#CaseCount_temporalCountArrayWithUniformIntervals apollo.tmp#CaseCount_referenceId apollo.tmp#CaseCount
Type tns:CaseCount
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:caseCountArray, tns:caseCountArrayDescription, tns:caseDefinitionsIncluded, tns:countTitle, tns:referenceId, tns:temporalCountArrayWithUniformIntervals, tns:totalCount
Instance
 
<tns:totalFatalCaseCount xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:countTitle>{1,1}</tns:countTitle>
  <tns:caseDefinitionsIncluded>{1,unbounded}</tns:caseDefinitionsIncluded>
  <tns:caseCountArrayDescription>{1,1}</tns:caseCountArrayDescription>
  <tns:totalCount>{1,1}</tns:totalCount>
  <tns:caseCountArray>{1,1}</tns:caseCountArray>
  <tns:temporalCountArrayWithUniformIntervals>{1,1}</tns:temporalCountArrayWithUniformIntervals>
  <tns:referenceId>{1,1}</tns:referenceId>
</tns:totalFatalCaseCount>
Source
 
<element name="totalFatalCaseCount" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000568" type="tns:CaseCount" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A data item that is the output of some infection case count and that represents the number of infectious disease cases that ended in death.</documentation>
  </annotation>
</element>
[ top ]
Element tns:EpidemicCaseCounts / tns:otherCaseCounts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseCount_countTitle apollo.tmp#CaseCount_caseDefinitionsIncluded apollo.tmp#CaseCount_caseCountArrayDescription apollo.tmp#CaseCount_totalCount apollo.tmp#CaseCount_caseCountArray apollo.tmp#CaseCount_temporalCountArrayWithUniformIntervals apollo.tmp#CaseCount_referenceId apollo.tmp#CaseCount
Type tns:CaseCount
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:caseCountArray, tns:caseCountArrayDescription, tns:caseDefinitionsIncluded, tns:countTitle, tns:referenceId, tns:temporalCountArrayWithUniformIntervals, tns:totalCount
Instance
 
<tns:otherCaseCounts xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:countTitle>{1,1}</tns:countTitle>
  <tns:caseDefinitionsIncluded>{1,unbounded}</tns:caseDefinitionsIncluded>
  <tns:caseCountArrayDescription>{1,1}</tns:caseCountArrayDescription>
  <tns:totalCount>{1,1}</tns:totalCount>
  <tns:caseCountArray>{1,1}</tns:caseCountArray>
  <tns:temporalCountArrayWithUniformIntervals>{1,1}</tns:temporalCountArrayWithUniformIntervals>
  <tns:referenceId>{1,1}</tns:referenceId>
</tns:otherCaseCounts>
Source
 
<element name="otherCaseCounts" type="tns:CaseCount" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:transmissionTrees
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TransmissionTree_thisCase apollo.tmp#TransmissionTree_casesThisCaseInfected apollo.tmp#TransmissionTree
Type tns:TransmissionTree
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:casesThisCaseInfected, tns:thisCase
Instance
 
<tns:transmissionTrees xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:thisCase>{1,1}</tns:thisCase>
  <tns:casesThisCaseInfected>{0,unbounded}</tns:casesThisCaseInfected>
</tns:transmissionTrees>
Source
 
<element name="transmissionTrees" type="tns:TransmissionTree" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:TransmissionTree / tns:thisCase
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseRecord_caseId apollo.tmp#CaseRecord_ageInYears apollo.tmp#CaseRecord_sex apollo.tmp#CaseRecord_race apollo.tmp#CaseRecord_occupations apollo.tmp#CaseRecord_placesVisitedWhileSusceptibleOrInfectious apollo.tmp#CaseRecord_infectionAcquiredFromCaseId apollo.tmp#CaseRecord_diseaseOutcomesWithLocationDateTime apollo.tmp#CaseRecord_labTestsAndResults apollo.tmp#CaseRecord_pathogenGeneSequence apollo.tmp#CaseRecord_references apollo.tmp#CaseRecord_caseClassification apollo.tmp#CaseRecord_location apollo.tmp#CaseRecord_caseDefinition apollo.tmp#CaseRecord_causalPathogen apollo.tmp#CaseRecord_treatment apollo.tmp#CaseRecord_infectionSource apollo.tmp#CaseRecord_controlMeasures apollo.tmp#CaseRecord
Type tns:CaseRecord
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:ageInYears, tns:caseClassification, tns:caseDefinition, tns:caseId, tns:causalPathogen, tns:controlMeasures, tns:diseaseOutcomesWithLocationDateTime, tns:infectionAcquiredFromCaseId, tns:infectionSource, tns:labTestsAndResults, tns:location, tns:occupations, tns:pathogenGeneSequence, tns:placesVisitedWhileSusceptibleOrInfectious, tns:race, tns:references, tns:sex, tns:treatment
Instance
 
<tns:thisCase xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:caseId>{1,1}</tns:caseId>
  <tns:ageInYears>{0,1}</tns:ageInYears>
  <tns:sex>{0,1}</tns:sex>
  <tns:race>{0,unbounded}</tns:race>
  <tns:occupations>{0,unbounded}</tns:occupations>
  <tns:placesVisitedWhileSusceptibleOrInfectious>{0,unbounded}</tns:placesVisitedWhileSusceptibleOrInfectious>
  <tns:infectionAcquiredFromCaseId>{0,1}</tns:infectionAcquiredFromCaseId>
  <tns:diseaseOutcomesWithLocationDateTime>{0,unbounded}</tns:diseaseOutcomesWithLocationDateTime>
  <tns:labTestsAndResults>{0,unbounded}</tns:labTestsAndResults>
  <tns:pathogenGeneSequence>{0,1}</tns:pathogenGeneSequence>
  <tns:references>{0,unbounded}</tns:references>
  <tns:caseClassification>{0,1}</tns:caseClassification>
  <tns:location>{0,unbounded}</tns:location>
  <tns:caseDefinition>{0,1}</tns:caseDefinition>
  <tns:causalPathogen>{0,1}</tns:causalPathogen>
  <tns:treatment>{0,unbounded}</tns:treatment>
  <tns:infectionSource>{0,unbounded}</tns:infectionSource>
  <tns:controlMeasures>{0,unbounded}</tns:controlMeasures>
</tns:thisCase>
Source
 
<element name="thisCase" type="tns:CaseRecord" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TransmissionTree / tns:casesThisCaseInfected
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TransmissionTree_thisCase apollo.tmp#TransmissionTree_casesThisCaseInfected apollo.tmp#TransmissionTree
Type tns:TransmissionTree
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:casesThisCaseInfected, tns:thisCase
Instance
 
<tns:casesThisCaseInfected xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:thisCase>{1,1}</tns:thisCase>
  <tns:casesThisCaseInfected>{0,unbounded}</tns:casesThisCaseInfected>
</tns:casesThisCaseInfected>
Source
 
<element name="casesThisCaseInfected" type="tns:TransmissionTree" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Epidemic / tns:relativeRiskDataSets
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#RelativeRiskDataSet_textualDescription apollo.tmp#RelativeRiskDataSet_caseCountArray apollo.tmp#RelativeRiskDataSet_controlCountArray apollo.tmp#RelativeRiskDataSet_referenceId apollo.tmp#RelativeRiskDataSet
Type tns:RelativeRiskDataSet
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:caseCountArray, tns:controlCountArray, tns:referenceId, tns:textualDescription
Instance
 
<tns:relativeRiskDataSets xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:textualDescription>{1,1}</tns:textualDescription>
  <tns:caseCountArray>{1,1}</tns:caseCountArray>
  <tns:controlCountArray>{1,1}</tns:controlCountArray>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:relativeRiskDataSets>
Source
 
<element name="relativeRiskDataSets" type="tns:RelativeRiskDataSet" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:RelativeRiskDataSet / tns:textualDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="textualDescription" type="token" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:RelativeRiskDataSet / tns:caseCountArray
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VariableCategoryValueTree_nVariables apollo.tmp#VariableCategoryValueTree_rootVariableNode apollo.tmp#VariableCategoryValueTree
Type tns:VariableCategoryValueTree
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:nVariables, tns:rootVariableNode
Instance
 
<tns:caseCountArray xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:nVariables>{0,1}</tns:nVariables>
  <tns:rootVariableNode>{1,1}</tns:rootVariableNode>
</tns:caseCountArray>
Source
 
<element name="caseCountArray" type="tns:VariableCategoryValueTree" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:RelativeRiskDataSet / tns:controlCountArray
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VariableCategoryValueTree_nVariables apollo.tmp#VariableCategoryValueTree_rootVariableNode apollo.tmp#VariableCategoryValueTree
Type tns:VariableCategoryValueTree
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:nVariables, tns:rootVariableNode
Instance
 
<tns:controlCountArray xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:nVariables>{0,1}</tns:nVariables>
  <tns:rootVariableNode>{1,1}</tns:rootVariableNode>
</tns:controlCountArray>
Source
 
<element name="controlCountArray" type="tns:VariableCategoryValueTree" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:RelativeRiskDataSet / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Reference_id apollo.tmp#Reference_title apollo.tmp#Reference_authors apollo.tmp#Reference_publication apollo.tmp#Reference_url apollo.tmp#Reference_pubMedId apollo.tmp#Reference_orcId apollo.tmp#Reference_obcIdeId apollo.tmp#Reference
Type tns:Reference
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:authors, tns:id, tns:obcIdeId, tns:orcId, tns:pubMedId, tns:publication, tns:title, tns:url
Instance
 
<tns:referenceId xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:id>{1,1}</tns:id>
  <tns:title>{1,1}</tns:title>
  <tns:authors>{0,1}</tns:authors>
  <tns:publication>{0,1}</tns:publication>
  <tns:url>{1,1}</tns:url>
  <tns:pubMedId>{0,1}</tns:pubMedId>
  <tns:orcId>{0,1}</tns:orcId>
  <tns:obcIdeId>{0,1}</tns:obcIdeId>
</tns:referenceId>
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="tns:Reference" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:causalPathogenIsolates
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="causalPathogenIsolates" type="token" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:Epidemic / tns:references
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Reference_id apollo.tmp#Reference_title apollo.tmp#Reference_authors apollo.tmp#Reference_publication apollo.tmp#Reference_url apollo.tmp#Reference_pubMedId apollo.tmp#Reference_orcId apollo.tmp#Reference_obcIdeId apollo.tmp#Reference
Type tns:Reference
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:authors, tns:id, tns:obcIdeId, tns:orcId, tns:pubMedId, tns:publication, tns:title, tns:url
Instance
 
<tns:references xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:id>{1,1}</tns:id>
  <tns:title>{1,1}</tns:title>
  <tns:authors>{0,1}</tns:authors>
  <tns:publication>{0,1}</tns:publication>
  <tns:url>{1,1}</tns:url>
  <tns:pubMedId>{0,1}</tns:pubMedId>
  <tns:orcId>{0,1}</tns:orcId>
  <tns:obcIdeId>{0,1}</tns:obcIdeId>
</tns:references>
Source
 
<element name="references" type="tns:Reference" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:Epidemic / tns:curator
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="curator" type="string" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:Epidemic / tns:editHistory
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="editHistory" type="string" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Epidemic / tns:reviewedBy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="reviewedBy" type="string" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:Epidemic / tns:acknowledgements
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="acknowledgements" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000324" type="string" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:IndividualAndEpidemiologicalCharacteristics / tns:individualInfection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualInfection_pathogenId apollo.tmp#IndividualInfection_infectionOutcomesWithDates apollo.tmp#IndividualInfection
Type tns:IndividualInfection
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:infectionOutcomesWithDates, tns:pathogenId
Instance
 
<tns:individualInfection xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:pathogenId>{1,1}</tns:pathogenId>
  <tns:infectionOutcomesWithDates>{1,unbounded}</tns:infectionOutcomesWithDates>
</tns:individualInfection>
Source
 
<element name="individualInfection" type="tns:IndividualInfection" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:IndividualInfection / tns:pathogenId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="pathogenId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:IndividualInfection / tns:infectionOutcomesWithDates
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionOutcomeWithDate_infectionOutcome apollo.tmp#InfectionOutcomeWithDate_date apollo.tmp#InfectionOutcomeWithDate
Type tns:InfectionOutcomeWithDate
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:date, tns:infectionOutcome
Instance
 
<tns:infectionOutcomesWithDates xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:infectionOutcome>{1,1}</tns:infectionOutcome>
  <tns:date>{1,1}</tns:date>
</tns:infectionOutcomesWithDates>
Source
 
<element name="infectionOutcomesWithDates" type="tns:InfectionOutcomeWithDate" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:InfectionOutcomeWithDate / tns:infectionOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionOutcomeEnum
Type tns:InfectionOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration infectious
enumeration immune
Source
 
<element name="infectionOutcome" type="tns:InfectionOutcomeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:InfectionOutcomeWithDate / tns:date
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="date" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:IndividualAndEpidemiologicalCharacteristics / tns:individualDisease
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualDisease_snomedId apollo.tmp#IndividualDisease_diseaseOutcomesWithDates apollo.tmp#IndividualDisease
Type tns:IndividualDisease
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:diseaseOutcomesWithDates, tns:snomedId
Instance
 
<tns:individualDisease xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:snomedId>{1,1}</tns:snomedId>
  <tns:diseaseOutcomesWithDates>{1,unbounded}</tns:diseaseOutcomesWithDates>
</tns:individualDisease>
Source
 
<element name="individualDisease" type="tns:IndividualDisease" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:IndividualDisease / tns:snomedId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SnomedId
Type tns:SnomedId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="snomedId" type="tns:SnomedId" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:IndividualDisease / tns:diseaseOutcomesWithDates
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeWithDate_infectionOutcome apollo.tmp#DiseaseOutcomeWithDate_date apollo.tmp#DiseaseOutcomeWithDate
Type tns:DiseaseOutcomeWithDate
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:date, tns:infectionOutcome
Instance
 
<tns:diseaseOutcomesWithDates xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:infectionOutcome>{1,1}</tns:infectionOutcome>
  <tns:date>{1,1}</tns:date>
</tns:diseaseOutcomesWithDates>
Source
 
<element name="diseaseOutcomesWithDates" type="tns:DiseaseOutcomeWithDate" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseOutcomeWithDate / tns:infectionOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionOutcomeEnum
Type tns:InfectionOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration infectious
enumeration immune
Source
 
<element name="infectionOutcome" type="tns:InfectionOutcomeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:DiseaseOutcomeWithDate / tns:date
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="date" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:IndividualAndEpidemiologicalCharacteristics / tns:exposurePeriodContacts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="exposurePeriodContacts" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:IndividualAndEpidemiologicalCharacteristics / tns:exposurePeriodDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="exposurePeriodDefinition" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:IndividualAndEpidemiologicalCharacteristics / tns:transmissionPeriodContacts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="transmissionPeriodContacts" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:IndividualAndEpidemiologicalCharacteristics / tns:transmissionPeriodDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="transmissionPeriodDefinition" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:ConditionalIndividualBehavior / tns:behavior
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#BehaviorEnum
Type tns:BehaviorEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration absentFromWork
enumeration absentFromPreSchool
enumeration absentFromPrimarySchool
enumeration absentFromSecondarySchool
Source
 
<element name="behavior" type="tns:BehaviorEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ConditionalIndividualBehavior / tns:conditionalProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A probability whose value is dependent upon the occurrence, known or presumed, of some process.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#ConditionalProbabilityDistribution_firstConditioningVariable apollo.tmp#ConditionalProbabilityDistribution
Type tns:ConditionalProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:firstConditioningVariable, tns:referenceId
Instance
 
<tns:conditionalProbability xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:firstConditioningVariable>{1,1}</tns:firstConditioningVariable>
</tns:conditionalProbability>
Source
 
<element name="conditionalProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000529" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A probability whose value is dependent upon the occurrence, known or presumed, of some process.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseSeries / tns:speciesOfCases
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesOfCases" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:CaseSeries / tns:caseSeriesDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="caseSeriesDescription" type="token" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:caseRecords
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseRecord_caseId apollo.tmp#CaseRecord_ageInYears apollo.tmp#CaseRecord_sex apollo.tmp#CaseRecord_race apollo.tmp#CaseRecord_occupations apollo.tmp#CaseRecord_placesVisitedWhileSusceptibleOrInfectious apollo.tmp#CaseRecord_infectionAcquiredFromCaseId apollo.tmp#CaseRecord_diseaseOutcomesWithLocationDateTime apollo.tmp#CaseRecord_labTestsAndResults apollo.tmp#CaseRecord_pathogenGeneSequence apollo.tmp#CaseRecord_references apollo.tmp#CaseRecord_caseClassification apollo.tmp#CaseRecord_location apollo.tmp#CaseRecord_caseDefinition apollo.tmp#CaseRecord_causalPathogen apollo.tmp#CaseRecord_treatment apollo.tmp#CaseRecord_infectionSource apollo.tmp#CaseRecord_controlMeasures apollo.tmp#CaseRecord
Type tns:CaseRecord
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:ageInYears, tns:caseClassification, tns:caseDefinition, tns:caseId, tns:causalPathogen, tns:controlMeasures, tns:diseaseOutcomesWithLocationDateTime, tns:infectionAcquiredFromCaseId, tns:infectionSource, tns:labTestsAndResults, tns:location, tns:occupations, tns:pathogenGeneSequence, tns:placesVisitedWhileSusceptibleOrInfectious, tns:race, tns:references, tns:sex, tns:treatment
Instance
 
<tns:caseRecords xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:caseId>{1,1}</tns:caseId>
  <tns:ageInYears>{0,1}</tns:ageInYears>
  <tns:sex>{0,1}</tns:sex>
  <tns:race>{0,unbounded}</tns:race>
  <tns:occupations>{0,unbounded}</tns:occupations>
  <tns:placesVisitedWhileSusceptibleOrInfectious>{0,unbounded}</tns:placesVisitedWhileSusceptibleOrInfectious>
  <tns:infectionAcquiredFromCaseId>{0,1}</tns:infectionAcquiredFromCaseId>
  <tns:diseaseOutcomesWithLocationDateTime>{0,unbounded}</tns:diseaseOutcomesWithLocationDateTime>
  <tns:labTestsAndResults>{0,unbounded}</tns:labTestsAndResults>
  <tns:pathogenGeneSequence>{0,1}</tns:pathogenGeneSequence>
  <tns:references>{0,unbounded}</tns:references>
  <tns:caseClassification>{0,1}</tns:caseClassification>
  <tns:location>{0,unbounded}</tns:location>
  <tns:caseDefinition>{0,1}</tns:caseDefinition>
  <tns:causalPathogen>{0,1}</tns:causalPathogen>
  <tns:treatment>{0,unbounded}</tns:treatment>
  <tns:infectionSource>{0,unbounded}</tns:infectionSource>
  <tns:controlMeasures>{0,unbounded}</tns:controlMeasures>
</tns:caseRecords>
Source
 
<element name="caseRecords" type="tns:CaseRecord" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:CaseSeries / tns:caseDefinitions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#CaseDefinition_apolloLabel apollo.tmp#CaseDefinition_investigationLabel apollo.tmp#CaseDefinition_investigationDefinition apollo.tmp#CaseDefinition_referenceId apollo.tmp#CaseDefinition
Type tns:CaseDefinition
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:apolloLabel, tns:investigationDefinition, tns:investigationLabel, tns:referenceId
Instance
 
<tns:caseDefinitions xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLabel>{1,1}</tns:apolloLabel>
  <tns:investigationLabel>{1,1}</tns:investigationLabel>
  <tns:investigationDefinition>{1,1}</tns:investigationDefinition>
  <tns:referenceId>{1,1}</tns:referenceId>
</tns:caseDefinitions>
Source
 
<element name="caseDefinitions" type="tns:CaseDefinition" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:caseSeriesStartDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="caseSeriesStartDate" type="date" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:caseSeriesEndDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="caseSeriesEndDate" type="date" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="location" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:causalPathogen
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName apollo.tmp#ApolloPathogenCode
Type tns:ApolloPathogenCode
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:cladeName, tns:ncbiTaxonId
Instance
 
<tns:causalPathogen xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:ncbiTaxonId>{1,1}</tns:ncbiTaxonId>
  <tns:cladeName>{0,1}</tns:cladeName>
</tns:causalPathogen>
Source
 
<element name="causalPathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:curator
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="curator" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:editHistory
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="editHistory" type="string" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:reviewedBy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="reviewedBy" type="string" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:CaseSeries / tns:acknowledgements
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs unbounded
Source
 
<element name="acknowledgements" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000324" type="string" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:DeprecatedCaseCount / tns:countTitle
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="countTitle" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DeprecatedCaseCount / tns:caseDefinitionsIncluded
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseDefinitionEnum
Type tns:CaseDefinitionEnum
Properties
content simple
minOccurs 1
maxOccurs unbounded
Facets
enumeration case
enumeration confirmedCase
enumeration probableCase
enumeration suspectedCase
enumeration neonatalCase
enumeration epidemiologicallyLinkedCase
enumeration fatalCase
enumeration alertCase
enumeration autochthonousCase
enumeration importedCase
Source
 
<element name="caseDefinitionsIncluded" type="tns:CaseDefinitionEnum" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:DeprecatedCaseCount / tns:totalCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="totalCount" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DeprecatedCaseCount / tns:caseCountArray
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseCountArray
Type tns:CaseCountArray
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="caseCountArray" type="tns:CaseCountArray" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DeprecatedCaseCount / tns:temporalCountArrayWithUniformIntervals
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TemporalCountArrayWithUniformIntervals_nDimensions apollo.tmp#TemporalCountArrayWithUniformIntervals_nTemporalIntervals apollo.tmp#TemporalCountArrayWithUniformIntervals_firstArrayAxis apollo.tmp#TemporalCountArrayWithUniformIntervals
Type tns:TemporalCountArrayWithUniformIntervals
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:firstArrayAxis, tns:nDimensions, tns:nTemporalIntervals
Instance
 
<tns:temporalCountArrayWithUniformIntervals xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:nDimensions>{0,1}</tns:nDimensions>
  <tns:nTemporalIntervals>{1,1}</tns:nTemporalIntervals>
  <tns:firstArrayAxis>{1,1}</tns:firstArrayAxis>
</tns:temporalCountArrayWithUniformIntervals>
Source
 
<element name="temporalCountArrayWithUniformIntervals" type="tns:TemporalCountArrayWithUniformIntervals" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DeprecatedCaseCount / tns:referenceId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DateSpanWithNoDataCollection / tns:startDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="startDate" type="date" minOccurs="1" maxOccurs="1"/>
[ top ]
Element tns:DateSpanWithNoDataCollection / tns:endDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="endDate" type="date" minOccurs="1" maxOccurs="1"/>
[ top ]
Element tns:CaseRecordCategoricalVariables / tns:someWayToIdentifyOutbreak
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="someWayToIdentifyOutbreak" type="string" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:CaseRecordCategoricalVariables / tns:categoricalVariablesAndCategories
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseRecordCategoricalVariable_categoricalVariable apollo.tmp#CaseRecordCategoricalVariable_categories apollo.tmp#CaseRecordCategoricalVariable
Type tns:CaseRecordCategoricalVariable
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:categoricalVariable, tns:categories
Instance
 
<tns:categoricalVariablesAndCategories xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:categoricalVariable>{1,1}</tns:categoricalVariable>
  <tns:categories>{1,unbounded}</tns:categories>
</tns:categoricalVariablesAndCategories>
Source
 
<element name="categoricalVariablesAndCategories" type="tns:CaseRecordCategoricalVariable" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:CaseRecordCategoricalVariable / tns:categoricalVariable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
a categorical variable is a variable which that can only assume a finite number of value and cast observation in a small number of categories
Diagram
Diagram apollo.tmp#CategoricalVariableEnum
Type tns:CategoricalVariableEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration gender
enumeration biologicalSex
enumeration sex
enumeration ageRange
enumeration timeSpan
enumeration diseaseOutcome
enumeration sourceOfInfection
enumeration householdMedianIncome
enumeration maritalStatus
enumeration schoolingStatus
enumeration disabilityStatus
enumeration employmentStatus
enumeration place
enumeration measuredQuantityRange
enumeration location
Source
 
<element name="categoricalVariable" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000252" type="tns:CategoricalVariableEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>a categorical variable is a variable which that can only assume a finite number of value and cast observation in a small number of categories</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseRecordCategoricalVariable / tns:categories
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition
Type tns:CategoryDefinition
Properties
content complex
minOccurs 1
maxOccurs unbounded
Source
 
<element name="categories" type="tns:CategoryDefinition" maxOccurs="unbounded" minOccurs="1">
</element>
[ top ]
Element tns:CaseVariableAndValue / tns:variable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
a variable is a data item which can assume any of a set of values, either as determined by an agent or as randomly occuring through observation.
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="variable" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000258" type="string">
  <annotation>
    <documentation>a variable is a data item which can assume any of a set of values, either as determined by an agent or as randomly occuring through observation.</documentation>
  </annotation>
</element>
[ top ]
Element tns:CaseVariableAndValue / tns:categoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition
Type tns:CategoryDefinition
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="categoryDefinition" type="tns:CategoryDefinition" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:CaseVariableAndValue / tns:value
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="value" type="string"/>
[ top ]
Element tns:EditorNote / tns:id
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="id" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EditorNote / tns:title
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="title" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EditorNote / tns:editor
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="editor" type="string" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:EditorNote / tns:note
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="note" type="string" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:IntegerCount / tns:integer
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="integer" type="integer" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DoubleCount / tns:double
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="double" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:GenderCategoryDefinition / tns:sex
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GenderEnum
Type tns:GenderEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration M
enumeration F
enumeration U
Source
 
<element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SourceOfInfectionCategoryDefinition / tns:sourceOfInfection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SourceOfInfectionEnum
Type tns:SourceOfInfectionEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration syringe
enumeration infectiousHost
enumeration eitherSyringeOrInfectiousHost
Source
 
<element name="sourceOfInfection" type="tns:SourceOfInfectionEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DiseaseOutcomeCategoryDefinition / tns:diseaseOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="diseaseOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000204" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TimeSpanCategoryDefinition / tns:unitOfTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfTimeEnum
Type tns:UnitOfTimeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration year
enumeration month
enumeration day
enumeration hour
enumeration minute
enumeration second
enumeration millisecond
Source
 
<element name="unitOfTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000003" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TimeSpanCategoryDefinition / tns:timeZeroReference
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TimeScaleEnum
Type tns:TimeScaleEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration simulatorTimeScale
enumeration decisionTimeScale
enumeration controlMeasureTimeScale
enumeration individualTreatmentTimeScale
enumeration epidemicTimeScale
enumeration gregorianCalendar
Source
 
<element name="timeZeroReference" type="tns:TimeScaleEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:TimeSpanCategoryDefinition / tns:startOfTimeSpan
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="startOfTimeSpan" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:TimeSpanCategoryDefinition / tns:durationInTimeUnits
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="durationInTimeUnits" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:RealTimePointCategoryDefinition / tns:offsetFromUtcInHours
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 0
maxOccurs 1
Source
 
<element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:RealTimePointCategoryDefinition / tns:date
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type date
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="date" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:PlaceCategoryDefinition / tns:place
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PlaceEnum
Type tns:PlaceEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration allSchools
enumeration allSchoolsOfOneLevelInOneTract
enumeration workplace
enumeration nzaraCottonFactory
enumeration home
Source
 
<element name="place" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000062" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:HealthcareFacilityCategoryDefinition / tns:healthcareFacilityId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A healthcare facility identifier that refers to some architectural structure that is the bearer of some healthcare function.
Diagram
Diagram apollo.tmp#RheaHealthcareFacilityEnum
Type tns:RheaHealthcareFacilityEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration XXXX
enumeration YYYY
Source
 
<element name="healthcareFacilityId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000506" type="tns:RheaHealthcareFacilityEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A healthcare facility identifier that refers to some architectural structure that is the bearer of some healthcare function.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MaritalStatusCategoryDefinition / tns:maritalStatus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#MaritalStatusEnum
Type tns:MaritalStatusEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration marriedSpousePresent
enumeration marriedSpouseAbsent
enumeration divorced
enumeration separated
enumeration widowed
enumeration neverMarried
Source
 
<element name="maritalStatus" type="tns:MaritalStatusEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SchoolingStatusCategoryDefinition / tns:schoolingStatus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SchoolingStatusEnum
Type tns:SchoolingStatusEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration currentlyEnrolledInSchool
enumeration previouslyEnrolledInSchool
enumeration neverEnrolledInSchool
Source
 
<element name="schoolingStatus" type="tns:SchoolingStatusEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:DisabilityStatusCategoryDefinition / tns:disabilityStatus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DisabilityStatusEnum
Type tns:DisabilityStatusEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration disabled
enumeration notDisabled
Source
 
<element name="disabilityStatus" type="tns:DisabilityStatusEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EmploymentStatusCategoryDefinition / tns:employmentStatus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that denotes some context in which an individual realizes some employee role if he or she is a member of the labor force, or the context in which he or she is not a member of the labor force according to certain prespecified conditions.
Diagram
Diagram apollo.tmp#EmploymentStatusEnum
Type tns:EmploymentStatusEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration armedForces
enumeration inLaborForceEmployedAtWork
enumeration inLaborForceEmployedNotAtWorkLastWeek
enumeration inLaborForceUnemployedExperiencedWorker
enumeration inLaborForceUnemployedExperiencedWorker
enumeration notInLaborForceHouseworker
enumeration notInLaborForceUnableToWork
enumeration notInLaborForceSchool
enumeration notInLaborForceOther
enumeration notInLaborForceUnpaidLessThan15Hours
Source
 
<element name="employmentStatus" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000570" type="tns:EmploymentStatusEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A data item that denotes some context in which an individual realizes some employee role if he or she is a member of the labor force, or the context in which he or she is not a member of the labor force according to certain prespecified conditions.</documentation>
  </annotation>
</element>
[ top ]
Element tns:MeasuredQuantityRangeCategoryDefinition / tns:unitOfMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UnitOfMeasureEnum
Type tns:UnitOfMeasureEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Source
 
<element name="unitOfMeasure" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:MeasuredQuantityRangeCategoryDefinition / tns:lowerBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Bound_finiteBoundary apollo.tmp#Bound_finiteBoundaryType apollo.tmp#Bound_infiniteBoundary apollo.tmp#Bound
Type tns:Bound
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:finiteBoundary, tns:finiteBoundaryType, tns:infiniteBoundary
Instance
 
<tns:lowerBound xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:finiteBoundary>{1,1}</tns:finiteBoundary>
  <tns:finiteBoundaryType>{1,1}</tns:finiteBoundaryType>
  <tns:infiniteBoundary>{1,1}</tns:infiniteBoundary>
</tns:lowerBound>
Source
 
<element name="lowerBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000436" type="tns:Bound" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:MeasuredQuantityRangeCategoryDefinition / tns:upperBound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Bound_finiteBoundary apollo.tmp#Bound_finiteBoundaryType apollo.tmp#Bound_infiniteBoundary apollo.tmp#Bound
Type tns:Bound
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:finiteBoundary, tns:finiteBoundaryType, tns:infiniteBoundary
Instance
 
<tns:upperBound xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:finiteBoundary>{1,1}</tns:finiteBoundary>
  <tns:finiteBoundaryType>{1,1}</tns:finiteBoundaryType>
  <tns:infiniteBoundary>{1,1}</tns:infiniteBoundary>
</tns:upperBound>
Source
 
<element name="upperBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000447" type="tns:Bound" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:simulatorCountOutputSpecificationId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="simulatorCountOutputSpecificationId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:speciesToCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesToCount" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:thingsToCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="thingsToCount" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:eventFrequencyMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EventFrequencyEnum
Type tns:EventFrequencyEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration incidence
enumeration prevelance
Source
 
<element name="eventFrequencyMeasure" type="tns:EventFrequencyEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:temporalGranularity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TemporalGranularityEnum
Type tns:TemporalGranularityEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration entireSimulation
enumeration eachSimulationTimestep
Source
 
<element name="temporalGranularity" type="tns:TemporalGranularityEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:spatialGranularity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SpatialGranularityEnum
Type tns:SpatialGranularityEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration none
enumeration admin0
enumeration admin1
enumeration admin2
enumeration admin3
enumeration admin4
enumeration admin5
enumeration latLong
Source
 
<element name="spatialGranularity" type="tns:SpatialGranularityEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:placeType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PlaceEnum
Type tns:PlaceEnum
Properties
content simple
minOccurs 0
maxOccurs unbounded
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration allSchools
enumeration allSchoolsOfOneLevelInOneTract
enumeration workplace
enumeration nzaraCottonFactory
enumeration home
Source
 
<element name="placeType" type="tns:PlaceEnum" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:individualControlMeasureStates
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualControlMeasureStateEnum
Type tns:IndividualControlMeasureStateEnum
Properties
content simple
minOccurs 0
maxOccurs unbounded
Facets
enumeration vaccinated
enumeration antiViralProphylaxed
enumeration quarantined
enumeration vaccinatedAndAntiViralProphylaxed
enumeration vaccinatedAndQuarantined
enumeration antiViralProphylaxedAndQuarantined
enumeration vaccinatedAndAntiViralProphylaxedAndQuarantined
Source
 
<element name="individualControlMeasureStates" type="tns:IndividualControlMeasureStateEnum" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:infectionStates
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionStateEnum
Type tns:InfectionStateEnum
Properties
content simple
minOccurs 0
maxOccurs unbounded
Facets
enumeration susceptible
enumeration greaterThanOrEqualToId50Exposure
enumeration latent
enumeration infectious
enumeration recovered
enumeration immuneAndActsLikeImmune
enumeration immuneButActsLikeNotImmune
enumeration newly_sick
Source
 
<element name="infectionStates" type="tns:InfectionStateEnum" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:infectionStateTransitions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionStateTransition_apolloLabel apollo.tmp#InfectionStateTransition_priorInfectionState apollo.tmp#InfectionStateTransition_newInfectionState apollo.tmp#InfectionStateTransition
Type tns:InfectionStateTransition
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:apolloLabel, tns:newInfectionState, tns:priorInfectionState
Instance
 
<tns:infectionStateTransitions xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLabel>{0,1}</tns:apolloLabel>
  <tns:priorInfectionState>{0,1}</tns:priorInfectionState>
  <tns:newInfectionState>{1,1}</tns:newInfectionState>
</tns:infectionStateTransitions>
Source
 
<element name="infectionStateTransitions" type="tns:InfectionStateTransition" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:InfectionStateTransition / tns:apolloLabel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionStateTransitionEnum
Type tns:InfectionStateTransitionEnum
Properties
content complex
minOccurs 0
maxOccurs 1
Source
 
<element name="apolloLabel" type="tns:InfectionStateTransitionEnum" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:InfectionStateTransition / tns:priorInfectionState
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionStateEnum
Type tns:InfectionStateEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration susceptible
enumeration greaterThanOrEqualToId50Exposure
enumeration latent
enumeration infectious
enumeration recovered
enumeration immuneAndActsLikeImmune
enumeration immuneButActsLikeNotImmune
enumeration newly_sick
Source
 
<element name="priorInfectionState" type="tns:InfectionStateEnum" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:InfectionStateTransition / tns:newInfectionState
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionStateEnum
Type tns:InfectionStateEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration susceptible
enumeration greaterThanOrEqualToId50Exposure
enumeration latent
enumeration infectious
enumeration recovered
enumeration immuneAndActsLikeImmune
enumeration immuneButActsLikeNotImmune
enumeration newly_sick
Source
 
<element name="newInfectionState" type="tns:InfectionStateEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:diseaseOutcomes
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 0
maxOccurs unbounded
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="diseaseOutcomes" type="tns:DiseaseOutcomeEnum" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:diseaseOutcomeTransitions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeTransition_apolloLabel apollo.tmp#DiseaseOutcomeTransition_priorDiseaseOutcome apollo.tmp#DiseaseOutcomeTransition_newDiseaseOutcome apollo.tmp#DiseaseOutcomeTransition
Type tns:DiseaseOutcomeTransition
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:apolloLabel, tns:newDiseaseOutcome, tns:priorDiseaseOutcome
Instance
 
<tns:diseaseOutcomeTransitions xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:apolloLabel>{0,1}</tns:apolloLabel>
  <tns:priorDiseaseOutcome>{0,1}</tns:priorDiseaseOutcome>
  <tns:newDiseaseOutcome>{1,1}</tns:newDiseaseOutcome>
</tns:diseaseOutcomeTransitions>
Source
 
<element name="diseaseOutcomeTransitions" type="tns:DiseaseOutcomeTransition" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:DiseaseOutcomeTransition / tns:apolloLabel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#diseaseOutcomeTransitionEnum
Type tns:diseaseOutcomeTransitionEnum
Properties
content complex
minOccurs 0
maxOccurs 1
Source
 
<element name="apolloLabel" type="tns:diseaseOutcomeTransitionEnum" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:DiseaseOutcomeTransition / tns:priorDiseaseOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="priorDiseaseOutcome" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="0">
</element>
[ top ]
Element tns:DiseaseOutcomeTransition / tns:newDiseaseOutcome
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeEnum
Type tns:DiseaseOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Source
 
<element name="newDiseaseOutcome" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SimulatorCountOutputSpecification / tns:otherVariables
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VariableAndCategoryDefinitions_variable apollo.tmp#VariableAndCategoryDefinitions_categories apollo.tmp#VariableAndCategoryDefinitions
Type tns:VariableAndCategoryDefinitions
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:categories, tns:variable
Instance
 
<tns:otherVariables xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:variable>{1,1}</tns:variable>
  <tns:categories>{1,unbounded}</tns:categories>
</tns:otherVariables>
Source
 
<element name="otherVariables" type="tns:VariableAndCategoryDefinitions" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:VariableAndCategoryDefinitions / tns:variable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoricalVariableEnum
Type tns:CategoricalVariableEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration gender
enumeration biologicalSex
enumeration sex
enumeration ageRange
enumeration timeSpan
enumeration diseaseOutcome
enumeration sourceOfInfection
enumeration householdMedianIncome
enumeration maritalStatus
enumeration schoolingStatus
enumeration disabilityStatus
enumeration employmentStatus
enumeration place
enumeration measuredQuantityRange
enumeration location
Source
 
<element name="variable" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000258" type="tns:CategoricalVariableEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:VariableAndCategoryDefinitions / tns:categories
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition
Type tns:CategoryDefinition
Properties
content complex
minOccurs 1
maxOccurs unbounded
Source
 
<element name="categories" type="tns:CategoryDefinition" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputResult / tns:simulatorCountOutputSpecificationId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="simulatorCountOutputSpecificationId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SimulatorCountOutputResult / tns:speciesToCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NcbiTaxonId
Type tns:NcbiTaxonId
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [0-9]
Source
 
<element name="speciesToCount" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputResult / tns:thingsToCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="thingsToCount" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutputResult / tns:resultArray
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TemporalGranularityEnum
Type tns:TemporalGranularityEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration entireSimulation
enumeration eachSimulationTimestep
Source
 
<element name="resultArray" type="tns:TemporalGranularityEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutput / tns:count
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type nonNegativeInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="count" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000032" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SimulatorCountOutput / tns:countArray
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VariableCategoryValueTree_nVariables apollo.tmp#VariableCategoryValueTree_rootVariableNode apollo.tmp#VariableCategoryValueTree
Type tns:VariableCategoryValueTree
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:nVariables, tns:rootVariableNode
Instance
 
<tns:countArray xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:nVariables>{0,1}</tns:nVariables>
  <tns:rootVariableNode>{1,1}</tns:rootVariableNode>
</tns:countArray>
Source
 
<element name="countArray" type="tns:VariableCategoryValueTree" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:InfectiousDiseaseTransmissionExperimentSpecification / tns:infectiousDiseaseScenarioWithoutIntervention
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseScenario_scenarioDate apollo.tmp#InfectiousDiseaseScenario_scenarioLocation apollo.tmp#InfectiousDiseaseScenario_populations apollo.tmp#InfectiousDiseaseScenario_infections apollo.tmp#InfectiousDiseaseScenario_colonizations apollo.tmp#InfectiousDiseaseScenario_contaminations apollo.tmp#InfectiousDiseaseScenario_contaminatedThingCensuses apollo.tmp#InfectiousDiseaseScenario_abioticThingCensuses apollo.tmp#InfectiousDiseaseScenario_infectiousDiseaseControlStrategies apollo.tmp#InfectiousDiseaseScenario_scenarioCartesianOrigin apollo.tmp#InfectiousDiseaseScenario_nonApolloParameters apollo.tmp#InfectiousDiseaseScenario
Type tns:InfectiousDiseaseScenario
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:abioticThingCensuses, tns:colonizations, tns:contaminatedThingCensuses, tns:contaminations, tns:infections, tns:infectiousDiseaseControlStrategies, tns:nonApolloParameters, tns:populations, tns:scenarioCartesianOrigin, tns:scenarioDate, tns:scenarioLocation
Instance
 
<tns:infectiousDiseaseScenarioWithoutIntervention xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:scenarioDate>{1,1}</tns:scenarioDate>
  <tns:scenarioLocation>{1,1}</tns:scenarioLocation>
  <tns:populations>{1,unbounded}</tns:populations>
  <tns:infections>{1,unbounded}</tns:infections>
  <tns:colonizations>{0,unbounded}</tns:colonizations>
  <tns:contaminations>{0,unbounded}</tns:contaminations>
  <tns:contaminatedThingCensuses>{0,unbounded}</tns:contaminatedThingCensuses>
  <tns:abioticThingCensuses>{0,unbounded}</tns:abioticThingCensuses>
  <tns:infectiousDiseaseControlStrategies>{0,unbounded}</tns:infectiousDiseaseControlStrategies>
  <tns:scenarioCartesianOrigin>{0,1}</tns:scenarioCartesianOrigin>
  <tns:nonApolloParameters>{0,unbounded}</tns:nonApolloParameters>
</tns:infectiousDiseaseScenarioWithoutIntervention>
Source
 
<element name="infectiousDiseaseScenarioWithoutIntervention" type="tns:InfectiousDiseaseScenario" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseTransmissionExperimentSpecification / tns:infectiousDiseaseControlStrategies
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectiousDiseaseControlStrategy_controlMeasures apollo.tmp#InfectiousDiseaseControlStrategy
Type tns:InfectiousDiseaseControlStrategy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:controlMeasures
Instance
 
<tns:infectiousDiseaseControlStrategies xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:controlMeasures>{0,unbounded}</tns:controlMeasures>
</tns:infectiousDiseaseControlStrategies>
Source
 
<element name="infectiousDiseaseControlStrategies" type="tns:InfectiousDiseaseControlStrategy" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:InfectiousDiseaseControlStrategy / tns:controlMeasures
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure
Type tns:InfectiousDiseaseControlMeasure
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Instance
 
<tns:controlMeasures xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:description>{1,1}</tns:description>
  <tns:location>{0,1}</tns:location>
  <tns:controlMeasureStartTime>{1,unbounded}</tns:controlMeasureStartTime>
  <tns:controlMeasureStopTime>{0,unbounded}</tns:controlMeasureStopTime>
  <tns:controlMeasureResponseDelay>{1,1}</tns:controlMeasureResponseDelay>
  <tns:controlMeasureStandDownDelay>{1,1}</tns:controlMeasureStandDownDelay>
  <tns:logisticalSystems>{0,unbounded}</tns:logisticalSystems>
  <tns:referenceId>{0,1}</tns:referenceId>
  <tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>{0,unbounded}</tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware>
</tns:controlMeasures>
Source
 
<element name="controlMeasures" type="tns:InfectiousDiseaseControlMeasure" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:InfectiousDiseaseTransmissionExperimentSpecification / tns:infectiousDiseaseTransmissionModelIds
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SoftwareIdentification_softwareDeveloper apollo.tmp#SoftwareIdentification_softwareName apollo.tmp#SoftwareIdentification_softwareVersion apollo.tmp#SoftwareIdentification_softwareType apollo.tmp#SoftwareIdentification_softwareLicenseIdentification apollo.tmp#SoftwareIdentification_customIdentifier apollo.tmp#SoftwareIdentification
Type tns:SoftwareIdentification
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:customIdentifier, tns:softwareDeveloper, tns:softwareLicenseIdentification, tns:softwareName, tns:softwareType, tns:softwareVersion
Instance
 
<tns:infectiousDiseaseTransmissionModelIds xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:softwareDeveloper>{1,1}</tns:softwareDeveloper>
  <tns:softwareName>{1,1}</tns:softwareName>
  <tns:softwareVersion>{1,1}</tns:softwareVersion>
  <tns:softwareType>{1,1}</tns:softwareType>
  <tns:softwareLicenseIdentification>{0,1}</tns:softwareLicenseIdentification>
  <tns:customIdentifier>{0,1}</tns:customIdentifier>
</tns:infectiousDiseaseTransmissionModelIds>
Source
 
<element name="infectiousDiseaseTransmissionModelIds" type="tns:SoftwareIdentification" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseTransmissionExperimentSpecification / tns:sensitivityAnalyses
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SensitivityAnalysisSpecification
Type tns:SensitivityAnalysisSpecification
Properties
content complex
minOccurs 0
maxOccurs unbounded
Source
 
<element name="sensitivityAnalyses" type="tns:SensitivityAnalysisSpecification" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:InfectiousDiseaseDecisionAnalysisSpecificationAndResults / tns:baseCaseDecisionModel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlDecisionModel_controlStrategyAlternatives apollo.tmp#InfectiousDiseaseControlDecisionModel_diseaseTransmissionModelChanceNode apollo.tmp#InfectiousDiseaseControlDecisionModel_infectiousDiseaseScenarioWithoutIntervention apollo.tmp#InfectiousDiseaseControlDecisionModel_utilityFunction apollo.tmp#InfectiousDiseaseControlDecisionModel
Type tns:InfectiousDiseaseControlDecisionModel
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:controlStrategyAlternatives, tns:diseaseTransmissionModelChanceNode, tns:infectiousDiseaseScenarioWithoutIntervention, tns:utilityFunction
Instance
 
<tns:baseCaseDecisionModel xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:controlStrategyAlternatives>{1,unbounded}</tns:controlStrategyAlternatives>
  <tns:diseaseTransmissionModelChanceNode>{1,unbounded}</tns:diseaseTransmissionModelChanceNode>
  <tns:infectiousDiseaseScenarioWithoutIntervention>{1,1}</tns:infectiousDiseaseScenarioWithoutIntervention>
  <tns:utilityFunction>{1,1}</tns:utilityFunction>
</tns:baseCaseDecisionModel>
Source
 
<element name="baseCaseDecisionModel" type="tns:InfectiousDiseaseControlDecisionModel" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseControlDecisionModel / tns:controlStrategyAlternatives
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectiousDiseaseControlStrategy_controlMeasures apollo.tmp#InfectiousDiseaseControlStrategy
Type tns:InfectiousDiseaseControlStrategy
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:controlMeasures
Instance
 
<tns:controlStrategyAlternatives xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:controlMeasures>{0,unbounded}</tns:controlMeasures>
</tns:controlStrategyAlternatives>
Source
 
<element name="controlStrategyAlternatives" type="tns:InfectiousDiseaseControlStrategy" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseControlDecisionModel / tns:diseaseTransmissionModelChanceNode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ModelIdAndProbability_modelId apollo.tmp#ModelIdAndProbability_probability apollo.tmp#ModelIdAndProbability
Type tns:ModelIdAndProbability
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:modelId, tns:probability
Instance
 
<tns:diseaseTransmissionModelChanceNode xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:modelId>{1,1}</tns:modelId>
  <tns:probability>{1,1}</tns:probability>
</tns:diseaseTransmissionModelChanceNode>
Source
 
<element name="diseaseTransmissionModelChanceNode" type="tns:ModelIdAndProbability" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:ModelIdAndProbability / tns:modelId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to some disease transmission model model.
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="modelId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000507" type="string" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>An identifier that refers to some disease transmission model model.</documentation>
  </annotation>
</element>
[ top ]
Element tns:ModelIdAndProbability / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseControlDecisionModel / tns:infectiousDiseaseScenarioWithoutIntervention
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseScenario_scenarioDate apollo.tmp#InfectiousDiseaseScenario_scenarioLocation apollo.tmp#InfectiousDiseaseScenario_populations apollo.tmp#InfectiousDiseaseScenario_infections apollo.tmp#InfectiousDiseaseScenario_colonizations apollo.tmp#InfectiousDiseaseScenario_contaminations apollo.tmp#InfectiousDiseaseScenario_contaminatedThingCensuses apollo.tmp#InfectiousDiseaseScenario_abioticThingCensuses apollo.tmp#InfectiousDiseaseScenario_infectiousDiseaseControlStrategies apollo.tmp#InfectiousDiseaseScenario_scenarioCartesianOrigin apollo.tmp#InfectiousDiseaseScenario_nonApolloParameters apollo.tmp#InfectiousDiseaseScenario
Type tns:InfectiousDiseaseScenario
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:abioticThingCensuses, tns:colonizations, tns:contaminatedThingCensuses, tns:contaminations, tns:infections, tns:infectiousDiseaseControlStrategies, tns:nonApolloParameters, tns:populations, tns:scenarioCartesianOrigin, tns:scenarioDate, tns:scenarioLocation
Instance
 
<tns:infectiousDiseaseScenarioWithoutIntervention xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:scenarioDate>{1,1}</tns:scenarioDate>
  <tns:scenarioLocation>{1,1}</tns:scenarioLocation>
  <tns:populations>{1,unbounded}</tns:populations>
  <tns:infections>{1,unbounded}</tns:infections>
  <tns:colonizations>{0,unbounded}</tns:colonizations>
  <tns:contaminations>{0,unbounded}</tns:contaminations>
  <tns:contaminatedThingCensuses>{0,unbounded}</tns:contaminatedThingCensuses>
  <tns:abioticThingCensuses>{0,unbounded}</tns:abioticThingCensuses>
  <tns:infectiousDiseaseControlStrategies>{0,unbounded}</tns:infectiousDiseaseControlStrategies>
  <tns:scenarioCartesianOrigin>{0,1}</tns:scenarioCartesianOrigin>
  <tns:nonApolloParameters>{0,unbounded}</tns:nonApolloParameters>
</tns:infectiousDiseaseScenarioWithoutIntervention>
Source
 
<element name="infectiousDiseaseScenarioWithoutIntervention" type="tns:InfectiousDiseaseScenario" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseControlDecisionModel / tns:utilityFunction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UtilityFunction_lambdaFunction apollo.tmp#UtilityFunction_textDescription apollo.tmp#UtilityFunction
Type tns:UtilityFunction
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:lambdaFunction, tns:textDescription
Instance
 
<tns:utilityFunction xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:lambdaFunction>{1,1}</tns:lambdaFunction>
  <tns:textDescription>{1,1}</tns:textDescription>
</tns:utilityFunction>
Source
 
<element name="utilityFunction" type="tns:UtilityFunction" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:UtilityFunction / tns:lambdaFunction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="lambdaFunction" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:UtilityFunction / tns:textDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="textDescription" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseDecisionAnalysisSpecificationAndResults / tns:baseCaseResult
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#BaseCaseResult_decisionAlternatives apollo.tmp#BaseCaseResult_expectedUtilities apollo.tmp#BaseCaseResult
Type tns:BaseCaseResult
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:decisionAlternatives, tns:expectedUtilities
Instance
 
<tns:baseCaseResult xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:decisionAlternatives>{1,unbounded}</tns:decisionAlternatives>
  <tns:expectedUtilities>{1,unbounded}</tns:expectedUtilities>
</tns:baseCaseResult>
Source
 
<element name="baseCaseResult" type="tns:BaseCaseResult" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:BaseCaseResult / tns:decisionAlternatives
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DecisionAlternative_singleMeasure apollo.tmp#DecisionAlternative_combinationMeasure apollo.tmp#DecisionAlternative_SequentialCombinationMeasure apollo.tmp#DecisionAlternative
Type tns:DecisionAlternative
Properties
content complex
minOccurs 1
maxOccurs unbounded
Model
Children tns:SequentialCombinationMeasure, tns:combinationMeasure, tns:singleMeasure
Instance
 
<tns:decisionAlternatives xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:singleMeasure>{1,1}</tns:singleMeasure>
  <tns:combinationMeasure>{1,1}</tns:combinationMeasure>
  <tns:SequentialCombinationMeasure>{1,1}</tns:SequentialCombinationMeasure>
</tns:decisionAlternatives>
Source
 
<element name="decisionAlternatives" type="tns:DecisionAlternative" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:DecisionAlternative / tns:singleMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="singleMeasure" type="string"/>
[ top ]
Element tns:DecisionAlternative / tns:combinationMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="combinationMeasure" type="string"/>
[ top ]
Element tns:DecisionAlternative / tns:SequentialCombinationMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
Source
 
<element name="SequentialCombinationMeasure" type="string"/>
[ top ]
Element tns:BaseCaseResult / tns:expectedUtilities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs unbounded
Source
 
<element name="expectedUtilities" type="double" maxOccurs="unbounded" minOccurs="1"/>
[ top ]
Element tns:InfectiousDiseaseDecisionAnalysisSpecificationAndResults / tns:sensitivityAnalysisSpecificationsAndResults
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#SensitivityAnalysisSpecificationAndResult_sensitivityAnalysisSpecification apollo.tmp#SensitivityAnalysisSpecificationAndResult_sensitivityAnalysisResult apollo.tmp#SensitivityAnalysisSpecificationAndResult
Type tns:SensitivityAnalysisSpecificationAndResult
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:sensitivityAnalysisResult, tns:sensitivityAnalysisSpecification
Instance
 
<tns:sensitivityAnalysisSpecificationsAndResults xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:sensitivityAnalysisSpecification>{1,1}</tns:sensitivityAnalysisSpecification>
  <tns:sensitivityAnalysisResult>{1,1}</tns:sensitivityAnalysisResult>
</tns:sensitivityAnalysisSpecificationsAndResults>
Source
 
<element name="sensitivityAnalysisSpecificationsAndResults" type="tns:SensitivityAnalysisSpecificationAndResult" maxOccurs="unbounded" minOccurs="0"/>
[ top ]
Element tns:SensitivityAnalysisSpecificationAndResult / tns:sensitivityAnalysisSpecification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SensitivityAnalysisSpecification
Type tns:SensitivityAnalysisSpecification
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="sensitivityAnalysisSpecification" type="tns:SensitivityAnalysisSpecification" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:SensitivityAnalysisSpecificationAndResult / tns:sensitivityAnalysisResult
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SensitivityAnalysisResult
Type tns:SensitivityAnalysisResult
Properties
content complex
minOccurs 1
maxOccurs 1
Source
 
<element name="sensitivityAnalysisResult" type="tns:SensitivityAnalysisResult" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:GesParametersForContactAndTransmission / tns:seasonalityFunctionParameters
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SeasonalityFunctionParameters_maximumSeasonalLatitude apollo.tmp#SeasonalityFunctionParameters_minimumSeasonalLatitude apollo.tmp#SeasonalityFunctionParameters_seasonalTemporalOffset apollo.tmp#SeasonalityFunctionParameters
Type tns:SeasonalityFunctionParameters
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:maximumSeasonalLatitude, tns:minimumSeasonalLatitude, tns:seasonalTemporalOffset
Instance
 
<tns:seasonalityFunctionParameters xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:maximumSeasonalLatitude>{1,1}</tns:maximumSeasonalLatitude>
  <tns:minimumSeasonalLatitude>{1,1}</tns:minimumSeasonalLatitude>
  <tns:seasonalTemporalOffset>{1,1}</tns:seasonalTemporalOffset>
</tns:seasonalityFunctionParameters>
Source
 
<element name="seasonalityFunctionParameters" type="tns:SeasonalityFunctionParameters" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SeasonalityFunctionParameters / tns:maximumSeasonalLatitude
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="maximumSeasonalLatitude" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000274" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SeasonalityFunctionParameters / tns:minimumSeasonalLatitude
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="minimumSeasonalLatitude" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000275" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SeasonalityFunctionParameters / tns:seasonalTemporalOffset
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="seasonalTemporalOffset" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000276" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:GesParametersForContactAndTransmission / tns:infectiousnessParameterSet
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GesInfectiousnessParameterSet_infectiousnessProfile apollo.tmp#GesInfectiousnessParameterSet_treat_inf apollo.tmp#GesInfectiousnessParameterSet_prophylaxis_inf apollo.tmp#GesInfectiousnessParameterSet_vacc_inf apollo.tmp#GesInfectiousnessParameterSet_relative_inf_symptomatic_multiplier apollo.tmp#GesInfectiousnessParameterSet
Type tns:GesInfectiousnessParameterSet
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:infectiousnessProfile, tns:prophylaxis_inf, tns:relative_inf_symptomatic_multiplier, tns:treat_inf, tns:vacc_inf
Instance
 
<tns:infectiousnessParameterSet xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:infectiousnessProfile>{0,1}</tns:infectiousnessProfile>
  <tns:treat_inf>{1,1}</tns:treat_inf>
  <tns:prophylaxis_inf>{1,1}</tns:prophylaxis_inf>
  <tns:vacc_inf>{1,1}</tns:vacc_inf>
  <tns:relative_inf_symptomatic_multiplier>{1,1}</tns:relative_inf_symptomatic_multiplier>
</tns:infectiousnessParameterSet>
Source
 
<element name="infectiousnessParameterSet" type="tns:GesInfectiousnessParameterSet" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:GesInfectiousnessParameterSet / tns:infectiousnessProfile
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A process profile that specifies the degree to which a host is likely to pass on an infection to a susceptible organism.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#ParametricProbabilityDistribution apollo.tmp#ContinuousParametricProbabilityDistribution
Type tns:ContinuousParametricProbabilityDistribution
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId
Instance
 
<tns:infectiousnessProfile xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:infectiousnessProfile>
Source
 
<element name="infectiousnessProfile" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000226" type="tns:ContinuousParametricProbabilityDistribution" maxOccurs="1" minOccurs="0">
  <annotation>
    <documentation>A process profile that specifies the degree to which a host is likely to pass on an infection to a susceptible organism.</documentation>
  </annotation>
</element>
[ top ]
Element tns:GesInfectiousnessParameterSet / tns:treat_inf
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:treat_inf xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:treat_inf>
Source
 
<element name="treat_inf" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:GesInfectiousnessParameterSet / tns:prophylaxis_inf
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:prophylaxis_inf xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:prophylaxis_inf>
Source
 
<element name="prophylaxis_inf" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:GesInfectiousnessParameterSet / tns:vacc_inf
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:vacc_inf xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:vacc_inf>
Source
 
<element name="vacc_inf" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:GesInfectiousnessParameterSet / tns:relative_inf_symptomatic_multiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonNegativeDouble
Type tns:NonNegativeDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minInclusive 0
Source
 
<element name="relative_inf_symptomatic_multiplier" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:GesParametersForContactAndTransmission / tns:contactModelsForSettings
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactModelForSetting_spatialKernelParametersForSetting apollo.tmp#ContactModelForSetting_probSymptomaticInfectionClinicallyDetected apollo.tmp#ContactModelForSetting_symptomaticInfectionMultiplier apollo.tmp#ContactModelForSetting_probSevereInfectionClinicallyDetected apollo.tmp#ContactModelForSetting
Type tns:ContactModelForSetting
Properties
content complex
minOccurs 6
maxOccurs 6
Model
Children tns:probSevereInfectionClinicallyDetected, tns:probSymptomaticInfectionClinicallyDetected, tns:spatialKernelParametersForSetting, tns:symptomaticInfectionMultiplier
Instance
 
<tns:contactModelsForSettings xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:spatialKernelParametersForSetting>{1,1}</tns:spatialKernelParametersForSetting>
  <tns:probSymptomaticInfectionClinicallyDetected>{1,1}</tns:probSymptomaticInfectionClinicallyDetected>
  <tns:symptomaticInfectionMultiplier>{1,1}</tns:symptomaticInfectionMultiplier>
  <tns:probSevereInfectionClinicallyDetected>{1,1}</tns:probSevereInfectionClinicallyDetected>
</tns:contactModelsForSettings>
Source
 
<element name="contactModelsForSettings" type="tns:ContactModelForSetting" maxOccurs="6" minOccurs="6"/>
[ top ]
Element tns:ContactModelForSetting / tns:spatialKernelParametersForSetting
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SpatialKernelFunctionParameters_type apollo.tmp#SpatialKernelFunctionParameters_a0 apollo.tmp#SpatialKernelFunctionParameters_a1 apollo.tmp#SpatialKernelFunctionParameters_b0 apollo.tmp#SpatialKernelFunctionParameters_b1 apollo.tmp#SpatialKernelFunctionParameters_c1 apollo.tmp#SpatialKernelFunctionParameters_cutoff apollo.tmp#SpatialKernelFunctionParameters
Type tns:SpatialKernelFunctionParameters
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:a0, tns:a1, tns:b0, tns:b1, tns:c1, tns:cutoff, tns:type
Instance
 
<tns:spatialKernelParametersForSetting xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:type>{1,1}</tns:type>
  <tns:a0>{1,1}</tns:a0>
  <tns:a1>{1,1}</tns:a1>
  <tns:b0>{1,1}</tns:b0>
  <tns:b1>{1,1}</tns:b1>
  <tns:c1>{1,1}</tns:c1>
  <tns:cutoff>{1,1}</tns:cutoff>
</tns:spatialKernelParametersForSetting>
Source
 
<element name="spatialKernelParametersForSetting" type="tns:SpatialKernelFunctionParameters" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SpatialKernelFunctionParameters / tns:type
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="type" type="token" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SpatialKernelFunctionParameters / tns:a0
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="a0" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SpatialKernelFunctionParameters / tns:a1
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="a1" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SpatialKernelFunctionParameters / tns:b0
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="b0" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SpatialKernelFunctionParameters / tns:b1
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="b1" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SpatialKernelFunctionParameters / tns:c1
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="c1" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:SpatialKernelFunctionParameters / tns:cutoff
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="cutoff" type="double" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForSetting / tns:probSymptomaticInfectionClinicallyDetected
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probSymptomaticInfectionClinicallyDetected" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForSetting / tns:symptomaticInfectionMultiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="symptomaticInfectionMultiplier" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForSetting / tns:probSevereInfectionClinicallyDetected
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probSevereInfectionClinicallyDetected" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForCommunity / tns:r_community
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:r_community xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:r_community>
Source
 
<element name="r_community" type="tns:Rate" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForCommunity / tns:c_community
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="c_community" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForCommunity / tns:q_community
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="q_community" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForHousehold / tns:r_household
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:r_household xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:r_household>
Source
 
<element name="r_household" type="tns:Rate" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForHousehold / tns:c_household
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="c_household" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForHousehold / tns:q_household
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="q_household" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForPlace / tns:placeType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#AbioticThingEnum
Type tns:AbioticThingEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration workplace
enumeration pigFarm
enumeration chickenFarm
enumeration household
enumeration community
enumeration ovipositionSite
enumeration syringe
enumeration bushMeat
Source
 
<element name="placeType" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForPlace / tns:r_place
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution apollo.tmp#Rate
Type tns:Rate
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Instance
 
<tns:r_place xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:numeratorUnitOfMeasure>{1,1}</tns:numeratorUnitOfMeasure>
  <tns:denominatorUnitOfMeasure>{1,1}</tns:denominatorUnitOfMeasure>
  <tns:value>{1,1}</tns:value>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:r_place>
Source
 
<element name="r_place" type="tns:Rate" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForPlace / tns:P_Pn_group
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#WithinGroupTransmissionProbability_groupType apollo.tmp#WithinGroupTransmissionProbability_probability apollo.tmp#WithinGroupTransmissionProbability
Type tns:WithinGroupTransmissionProbability
Properties
content complex
minOccurs 0
maxOccurs unbounded
Model
Children tns:groupType, tns:probability
Instance
 
<tns:P_Pn_group xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:groupType>{1,1}</tns:groupType>
  <tns:probability>{1,1}</tns:probability>
</tns:P_Pn_group>
Source
 
<element name="P_Pn_group" type="tns:WithinGroupTransmissionProbability" maxOccurs="unbounded" minOccurs="0">
</element>
[ top ]
Element tns:WithinGroupTransmissionProbability / tns:groupType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="groupType" type="token" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:WithinGroupTransmissionProbability / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForPlace / tns:probSymptomaticIndividualAbsent
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probSymptomaticIndividualAbsent" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForPlace / tns:symptomaticAbsenteeMultiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="symptomaticAbsenteeMultiplier" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForPlace / tns:probSeverelyInfectedIndividualAbsent
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probSeverelyInfectedIndividualAbsent" type="tns:Probability" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForPlace / tns:severelyInfectedAbsenteeMultiplier
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="severelyInfectedAbsenteeMultiplier" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ContactModelForPlace / tns:q_social
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="q_social" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:ReceivingDestinationAndProbability / tns:receivingDestination
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PlaceEnum
Type tns:PlaceEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration allSchools
enumeration allSchoolsOfOneLevelInOneTract
enumeration workplace
enumeration nzaraCottonFactory
enumeration home
Source
 
<element name="receivingDestination" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ReceivingDestinationAndProbability / tns:probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Probability
Type tns:Probability
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
maxInclusive 1
minInclusive 0
Source
 
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:ReceivingDestinationAndProbability / tns:transitTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration
Type tns:Duration
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children tns:referenceId, tns:unitOfTime
Instance
 
<tns:transitTime xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:unitOfTime>{1,1}</tns:unitOfTime>
  <tns:referenceId>{0,1}</tns:referenceId>
</tns:transitTime>
Source
 
<element name="transitTime" type="tns:Duration" maxOccurs="1" minOccurs="0"/>
[ top ]
Element tns:SimulatorTimeSpecification / tns:unitOfTimeForSimulatorTimeStep
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A time unit that is part of a simulation time step action specification.
Diagram
Diagram apollo.tmp#UnitOfTimeEnum
Type tns:UnitOfTimeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration year
enumeration month
enumeration day
enumeration hour
enumeration minute
enumeration second
enumeration millisecond
Source
 
<element name="unitOfTimeForSimulatorTimeStep" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000014" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>A time unit that is part of a simulation time step action specification.</documentation>
  </annotation>
</element>
[ top ]
Element tns:SimulatorTimeSpecification / tns:numberOfUnitsOfTimeInOneSimulatorTimeStep
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A numeral that is part of a simulation time step action specification.
Diagram
Diagram apollo.tmp#PositiveDouble
Type tns:PositiveDouble
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
minExclusive 0
Source
 
<element name="numberOfUnitsOfTimeInOneSimulatorTimeStep" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000012" maxOccurs="1" minOccurs="1" type="tns:PositiveDouble">
  <annotation>
    <documentation>A numeral that is part of a simulation time step action specification.</documentation>
  </annotation>
</element>
[ top ]
Element tns:SimulatorTimeSpecification / tns:runLength
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The action specification that specifies the number of time steps a simulation is going to run.
Diagram
Diagram
Type positiveInteger
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="runLength" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000015" type="positiveInteger" maxOccurs="1" minOccurs="1">
  <annotation>
    <documentation>The action specification that specifies the number of time steps a simulation is going to run.</documentation>
  </annotation>
</element>
[ top ]
Element tns:LiberalSickLeaveControlMeasure / tns:compliance
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:compliance xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:compliance>
Source
 
<element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:OneWaySensitivityAnalysisOfContinousVariableSpecification / tns:xPathToVariable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type token
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="xPathToVariable" type="token" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:OneWaySensitivityAnalysisOfContinousVariableSpecification / tns:minimumValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="minimumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000432" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:OneWaySensitivityAnalysisOfContinousVariableSpecification / tns:maximumValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="maximumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000433" type="double" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:OneWaySensitivityAnalysisOfContinousVariableSpecification / tns:numberOfDiscretizations
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type integer
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="numberOfDiscretizations" type="integer" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:VoluntaryHouseholdQuarantineControlMeasure / tns:compliance
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution apollo.tmp#ProbabilisticParameter
Type tns:ProbabilisticParameter
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:probability, tns:probabilityDistribution
Instance
 
<tns:compliance xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:probability>{1,1}</tns:probability>
  <tns:probabilityDistribution>{1,1}</tns:probabilityDistribution>
</tns:compliance>
Source
 
<element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:LocationCategoryDefinition / tns:spatialGranularity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SpatialGranularityEnum
Type tns:SpatialGranularityEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration none
enumeration admin0
enumeration admin1
enumeration admin2
enumeration admin3
enumeration admin4
enumeration admin5
enumeration latLong
Source
 
<element name="spatialGranularity" type="tns:SpatialGranularityEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:LocationCategoryDefinition / tns:apolloLocationCode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloLocationCode
Type tns:ApolloLocationCode
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
pattern [A-Z0-9]{2,17}
Source
 
<element name="apolloLocationCode" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000259" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecast / tns:timeOfForecast
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="timeOfForecast" type="string" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:EpidemicForecast / tns:modelIdentification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SoftwareIdentification_softwareDeveloper apollo.tmp#SoftwareIdentification_softwareName apollo.tmp#SoftwareIdentification_softwareVersion apollo.tmp#SoftwareIdentification_softwareType apollo.tmp#SoftwareIdentification_softwareLicenseIdentification apollo.tmp#SoftwareIdentification_customIdentifier apollo.tmp#SoftwareIdentification
Type tns:SoftwareIdentification
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:customIdentifier, tns:softwareDeveloper, tns:softwareLicenseIdentification, tns:softwareName, tns:softwareType, tns:softwareVersion
Instance
 
<tns:modelIdentification xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:softwareDeveloper>{1,1}</tns:softwareDeveloper>
  <tns:softwareName>{1,1}</tns:softwareName>
  <tns:softwareVersion>{1,1}</tns:softwareVersion>
  <tns:softwareType>{1,1}</tns:softwareType>
  <tns:softwareLicenseIdentification>{0,1}</tns:softwareLicenseIdentification>
  <tns:customIdentifier>{0,1}</tns:customIdentifier>
</tns:modelIdentification>
Source
 
<element name="modelIdentification" type="tns:SoftwareIdentification" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecast / tns:infectionBeingForecast
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Infection_pathogen apollo.tmp#Infection_host apollo.tmp#Infection_infectiousDiseases apollo.tmp#Infection_infectionAcquisitionsFromInfectedHosts apollo.tmp#Infection_infectionAcquisitionsFromContaminatedThings apollo.tmp#Infection_InfectionAcquisitionsFromColonizedHosts apollo.tmp#Infection
Type tns:Infection
Type hierarchy
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:InfectionAcquisitionsFromColonizedHosts, tns:host, tns:infectionAcquisitionsFromContaminatedThings, tns:infectionAcquisitionsFromInfectedHosts, tns:infectiousDiseases, tns:pathogen
Instance
 
<tns:infectionBeingForecast xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:pathogen>{1,1}</tns:pathogen>
  <tns:host>{1,1}</tns:host>
  <tns:infectiousDiseases>{0,unbounded}</tns:infectiousDiseases>
  <tns:infectionAcquisitionsFromInfectedHosts>{0,unbounded}</tns:infectionAcquisitionsFromInfectedHosts>
  <tns:infectionAcquisitionsFromContaminatedThings>{0,unbounded}</tns:infectionAcquisitionsFromContaminatedThings>
  <tns:InfectionAcquisitionsFromColonizedHosts>{0,unbounded}</tns:InfectionAcquisitionsFromColonizedHosts>
</tns:infectionBeingForecast>
Source
 
<element name="infectionBeingForecast" type="tns:Infection" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecast / tns:epidemicOutcomeBeingForecast
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EpidemicOutcomeEnum
Type tns:EpidemicOutcomeEnum
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
enumeration peak week of new infections
enumeration start week of epidemic transmission
enumeration maximum infection incidence
enumeration total incidence of infections
enumeration total incidence of diseaseA
enumeration total incidence of diseaseB
enumeration h
enumeration death
enumeration recovery
Source
 
<element name="epidemicOutcomeBeingForecast" type="tns:EpidemicOutcomeEnum" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecasts / tns:forecasts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EpidemicForecast_timeOfForecast apollo.tmp#EpidemicForecast_modelIdentification apollo.tmp#EpidemicForecast_infectionBeingForecast apollo.tmp#EpidemicForecast_epidemicOutcomeBeingForecast apollo.tmp#EpidemicForecast
Type tns:EpidemicForecast
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:epidemicOutcomeBeingForecast, tns:infectionBeingForecast, tns:modelIdentification, tns:timeOfForecast
Instance
 
<tns:forecasts xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:timeOfForecast>{1,1}</tns:timeOfForecast>
  <tns:modelIdentification>{1,1}</tns:modelIdentification>
  <tns:infectionBeingForecast>{1,1}</tns:infectionBeingForecast>
  <tns:epidemicOutcomeBeingForecast>{1,1}</tns:epidemicOutcomeBeingForecast>
</tns:forecasts>
Source
 
<element name="forecasts" type="tns:EpidemicForecast" maxOccurs="1" minOccurs="1">
</element>
[ top ]
Element tns:EpidemicForecasts / tns:modelIdentification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SoftwareIdentification_softwareDeveloper apollo.tmp#SoftwareIdentification_softwareName apollo.tmp#SoftwareIdentification_softwareVersion apollo.tmp#SoftwareIdentification_softwareType apollo.tmp#SoftwareIdentification_softwareLicenseIdentification apollo.tmp#SoftwareIdentification_customIdentifier apollo.tmp#SoftwareIdentification
Type tns:SoftwareIdentification
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children tns:customIdentifier, tns:softwareDeveloper, tns:softwareLicenseIdentification, tns:softwareName, tns:softwareType, tns:softwareVersion
Instance
 
<tns:modelIdentification xmlns:tns="http://types.apollo.pitt.edu/v4_0_1/">
  <tns:softwareDeveloper>{1,1}</tns:softwareDeveloper>
  <tns:softwareName>{1,1}</tns:softwareName>
  <tns:softwareVersion>{1,1}</tns:softwareVersion>
  <tns:softwareType>{1,1}</tns:softwareType>
  <tns:softwareLicenseIdentification>{0,1}</tns:softwareLicenseIdentification>
  <tns:customIdentifier>{0,1}</tns:customIdentifier>
</tns:modelIdentification>
Source
 
<element name="modelIdentification" type="tns:SoftwareIdentification" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecasts / tns:teamName
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="teamName" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecasts / tns:teamMembers
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="teamMembers" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecasts / tns:modelDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="modelDescription" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecasts / tns:modelInputs
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="modelInputs" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Element tns:EpidemicForecasts / tns:NewElement
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
 
<element name="NewElement" type="string" maxOccurs="1" minOccurs="1"/>
[ top ]
Complex Type tns:InfectiousDiseaseScenario
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A dataset that represents at least one pathogen population (of a particular biological taxon) in one host population (of a particular biological taxon) in an ecosystem in a particular location at a particular point in time.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseScenario_scenarioDate apollo.tmp#InfectiousDiseaseScenario_scenarioLocation apollo.tmp#InfectiousDiseaseScenario_populations apollo.tmp#InfectiousDiseaseScenario_infections apollo.tmp#InfectiousDiseaseScenario_colonizations apollo.tmp#InfectiousDiseaseScenario_contaminations apollo.tmp#InfectiousDiseaseScenario_contaminatedThingCensuses apollo.tmp#InfectiousDiseaseScenario_abioticThingCensuses apollo.tmp#InfectiousDiseaseScenario_infectiousDiseaseControlStrategies apollo.tmp#InfectiousDiseaseScenario_scenarioCartesianOrigin apollo.tmp#InfectiousDiseaseScenario_nonApolloParameters
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:abioticThingCensuses, tns:colonizations, tns:contaminatedThingCensuses, tns:contaminations, tns:infections, tns:infectiousDiseaseControlStrategies, tns:nonApolloParameters, tns:populations, tns:scenarioCartesianOrigin, tns:scenarioDate, tns:scenarioLocation
Source
 
<complexType name="InfectiousDiseaseScenario" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000184">
  <annotation>
    <documentation>A dataset that represents at least one pathogen population (of a particular biological taxon) in one host population (of a particular biological taxon) in an ecosystem in a particular location at a particular point in time.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="scenarioDate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000185" type="dateTime" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An information content entity that refers to a real date corresponding to simulator time zero.</documentation>
          </annotation>
        </element>
        <element name="scenarioLocation" type="tns:Location" maxOccurs="1" minOccurs="1">
        </element>
        <element name="populations" type="tns:Population" maxOccurs="unbounded" minOccurs="1"/>
        <element name="infections" type="tns:Infection" maxOccurs="unbounded" minOccurs="1"/>
        <element name="colonizations" type="tns:Colonization" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="contaminations" type="tns:Contamination" maxOccurs="unbounded" minOccurs="0"/>
        <element name="contaminatedThingCensuses" type="tns:ContaminatedThingCensus" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="abioticThingCensuses" type="tns:AbioticThingCensus" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="infectiousDiseaseControlStrategies" type="tns:InfectiousDiseaseControlMeasure" maxOccurs="unbounded" minOccurs="0"/>
        <element name="scenarioCartesianOrigin" type="tns:ScenarioCartesianOrigin" maxOccurs="1" minOccurs="0">
        </element>
        <element name="nonApolloParameters" type="tns:NonApolloParameter" maxOccurs="unbounded" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ApolloIndexableItem
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="ApolloIndexableItem" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000202"/>
[ top ]
Complex Type tns:Location
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A site designated by some relative spatial orientation.
Diagram
Diagram apollo.tmp#Location_apolloLocationCode apollo.tmp#Location_locationDefinition apollo.tmp#Location_cartesianCircleLocationDefinition apollo.tmp#Location_textualDescription
Used by
Model
Children tns:apolloLocationCode, tns:cartesianCircleLocationDefinition, tns:locationDefinition, tns:textualDescription
Source
 
<complexType name="Location" sawsdl:modelReference="http://purl.obolibrary.org/obo/GEO_000000372">
  <annotation>
    <documentation>A site designated by some relative spatial orientation.</documentation>
  </annotation>
  <sequence>
    <choice>
      <element name="apolloLocationCode" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000259" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1">
        <annotation>
          <documentation>An identifier that refers to a particular geographical region and that is constructed per guidelines of the Apollo project.</documentation>
        </annotation>
      </element>
      <element name="locationDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000377" type="tns:LocationDefinition" maxOccurs="1" minOccurs="1">
        <annotation>
          <documentation>An information content entity that specifies a geographical region by (1) listing the names of other geographical regions whose mereological sum constitutes it and optionally (2) listing the names of other geographical regions that are subsequently subtracted from the mereological sum.</documentation>
        </annotation>
      </element>
      <element name="cartesianCircleLocationDefinition" type="tns:CartesianCircleLocationDefinition" maxOccurs="1" minOccurs="1">
      </element>
    </choice>
    <element name="textualDescription" type="string" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:ApolloLocationCode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to a particular geographical region and that is constructed per guidelines of the Apollo project.
Diagram
Diagram
Type restriction of token
Facets
pattern [A-Z0-9]{2,17}
Used by
Source
 
<simpleType name="ApolloLocationCode" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000259">
  <annotation>
    <documentation>An identifier that refers to a particular geographical region and that is constructed per guidelines of the Apollo project.</documentation>
  </annotation>
  <restriction base="token">
    <pattern value="[A-Z0-9]{2,17}"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:LocationDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies a geographical region by (1) listing the names of other geographical regions whose mereological sum constitutes it and optionally (2) listing the names of other geographical regions that are subsequently subtracted from the mereological sum.
Diagram
Diagram apollo.tmp#LocationDefinition_locationsIncluded apollo.tmp#LocationDefinition_locationsExcluded apollo.tmp#LocationDefinition_multiGeometries
Used by
Model
Children tns:locationsExcluded, tns:locationsIncluded, tns:multiGeometries
Source
 
<complexType name="LocationDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000377">
  <annotation>
    <documentation>An information content entity that specifies a geographical region by (1) listing the names of other geographical regions whose mereological sum constitutes it and optionally (2) listing the names of other geographical regions that are subsequently subtracted from the mereological sum.</documentation>
  </annotation>
  <sequence>
    <element name="locationsIncluded" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="1"/>
    <element name="locationsExcluded" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="0"/>
    <element name="multiGeometries" type="tns:MultiGeometry" maxOccurs="unbounded" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:MultiGeometry
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#MultiGeometry_polygons
Used by
Model
Children tns:polygons
Source
 
<complexType name="MultiGeometry">
  <sequence>
    <element name="polygons" type="tns:LocationPolygon" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:LocationPolygon
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LocationPolygon_linearRing
Used by
Model
Children tns:linearRing
Source
 
<complexType name="LocationPolygon">
  <sequence>
    <element name="linearRing" type="string"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CartesianCircleLocationDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CartesianCircleLocationDefinition_eastWestOffsetFromCartesianCenter apollo.tmp#CartesianCircleLocationDefinition_northSouthOffsetFromCartesianCenter apollo.tmp#CartesianCircleLocationDefinition_altitudeRelativeToCartesianCenter apollo.tmp#CartesianCircleLocationDefinition_radius
Used by
Model
Children tns:altitudeRelativeToCartesianCenter, tns:eastWestOffsetFromCartesianCenter, tns:northSouthOffsetFromCartesianCenter, tns:radius
Source
 
<complexType name="CartesianCircleLocationDefinition">
  <sequence>
    <element name="eastWestOffsetFromCartesianCenter" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
    <element name="northSouthOffsetFromCartesianCenter" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
    <element name="altitudeRelativeToCartesianCenter" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
    <element name="radius" sawsdl:modelReference="http://purl.obolibrary.org/obo/PATO_0002390" type="tns:Distance" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter.</documentation>
      </annotation>
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:Distance
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A quality that is the extent of space between two entities.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Distance_unitOfDistance apollo.tmp#Distance_value
Type extension of tns:ParameterValue
Type hierarchy
Used by
Model
Children tns:unitOfDistance, tns:value
Source
 
<complexType name="Distance" sawsdl:modelReference="http://purl.obolibrary.org/obo/PATO_0000040">
  <annotation>
    <documentation>A quality that is the extent of space between two entities.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ParameterValue">
      <sequence>
        <element name="unitOfDistance" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000001" type="tns:UnitOfDistanceEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="value" type="double" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ParameterValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="ParameterValue"/>
[ top ]
Simple Type tns:UnitOfDistanceEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration meters
enumeration inches
enumeration miles
Used by
Source
 
<simpleType name="UnitOfDistanceEnum">
  <restriction base="string">
    <enumeration value="meters"/>
    <enumeration value="inches"/>
    <enumeration value="miles"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:Population
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A collection of organisms, all of the same species, that live in the same place.
Diagram
Diagram apollo.tmp#Population_location apollo.tmp#Population_taxonId apollo.tmp#Population_count apollo.tmp#Population_infectionAndImmunityCensuses apollo.tmp#Population_colonizationCensuses apollo.tmp#Population_individualsAndHouseholds apollo.tmp#Population_pointerToIndividualsAndHouseholds apollo.tmp#Population_individualBiologyAndBehavior
Used by
Model
Children tns:colonizationCensuses, tns:count, tns:individualBiologyAndBehavior, tns:individualsAndHouseholds, tns:infectionAndImmunityCensuses, tns:location, tns:pointerToIndividualsAndHouseholds, tns:taxonId
Source
 
<complexType name="Population" sawsdl:modelReference="http://purl.obolibrary.org/obo/PCO_0000001">
  <annotation>
    <documentation>A collection of organisms, all of the same species, that live in the same place.</documentation>
  </annotation>
  <sequence>
    <element name="location" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
    <element name="taxonId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000509" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An identifier that denotes a biological taxonomic group.</documentation>
      </annotation>
    </element>
    <element name="count" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000032" type="positiveInteger" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>A measurement datum that is the output of counting.</documentation>
      </annotation>
    </element>
    <element name="infectionAndImmunityCensuses" type="tns:PopulationInfectionAndImmunityCensus" maxOccurs="unbounded" minOccurs="0"/>
    <element name="colonizationCensuses" type="tns:PopulationColonizationCensus" maxOccurs="unbounded" minOccurs="0"/>
    <choice>
      <element name="individualsAndHouseholds" type="tns:IndividualsAndHouseholds" maxOccurs="1" minOccurs="0"/>
      <element name="pointerToIndividualsAndHouseholds" type="tns:PointerToData" maxOccurs="1" minOccurs="0"/>
    </choice>
    <element name="individualBiologyAndBehavior" type="tns:IndividualBiologyAndBehavior" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:NcbiTaxonId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by the NCBI Taxonomy that designates a biological taxon.
Diagram
Diagram
Type restriction of token
Facets
pattern [0-9]
Used by
Source
 
<simpleType name="NcbiTaxonId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000203">
  <annotation>
    <documentation>An identifier curated by the NCBI Taxonomy that designates a biological taxon.</documentation>
  </annotation>
  <restriction base="token">
    <pattern value="[0-9]"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:PopulationInfectionAndImmunityCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data set that is the result of a population infection survey and a population immunity survey.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#PopulationInfectionAndImmunityCensus_pathogen apollo.tmp#PopulationInfectionAndImmunityCensus_censusData
Type extension of tns:Census
Type hierarchy
Used by
Model
Children tns:censusData, tns:description, tns:location, tns:pathogen, tns:referenceDate, tns:simulatorTime
Source
 
<complexType name="PopulationInfectionAndImmunityCensus" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000157">
  <annotation>
    <documentation>A data set that is the result of a population infection survey and a population immunity survey.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Census">
      <sequence>
        <element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
        </element>
        <element name="censusData" type="tns:PopulationInfectionAndImmunityCensusData" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:Census
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A planned process that realizes a census plan specification.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:description, tns:location, tns:referenceDate, tns:simulatorTime
Source
 
<complexType name="Census" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000389">
  <annotation>
    <documentation>A planned process that realizes a census plan specification.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1">
        </element>
        <element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
        </element>
        <element name="simulatorTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000069" type="int" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A numeral that indexes a specific time step of a simulation.</documentation>
          </annotation>
        </element>
        <element name="referenceDate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000240" type="dateTime" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A information content entity that specifies the date of a census.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ApolloPathogenCode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that designates a biological taxon and optionally a clade of pathogens.
Diagram
Diagram apollo.tmp#ApolloPathogenCode_ncbiTaxonId apollo.tmp#ApolloPathogenCode_cladeName
Used by
Model
Children tns:cladeName, tns:ncbiTaxonId
Source
 
<complexType name="ApolloPathogenCode" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000219">
  <annotation>
    <documentation>An information content entity that designates a biological taxon and optionally a clade of pathogens.</documentation>
  </annotation>
  <sequence>
    <element name="ncbiTaxonId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
    <element name="cladeName" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000232" type="token" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>An identifier that denotes a group of organisms or groups of organisms based on common ancestors.</documentation>
      </annotation>
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:PopulationInfectionAndImmunityCensusData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#PopulationInfectionAndImmunityCensusData_censusDataCells apollo.tmp#PopulationInfectionAndImmunityCensusData_exceptionSubpopulations
Type extension of tns:CensusData
Type hierarchy
Used by
Model
Children tns:censusDataCells, tns:date, tns:exceptionSubpopulations, tns:location
Source
 
<complexType name="PopulationInfectionAndImmunityCensusData">
  <complexContent>
    <extension base="tns:CensusData">
      <sequence>
        <element name="censusDataCells" type="tns:PopulationInfectionAndImmunityCensusDataCell" maxOccurs="unbounded" minOccurs="1">
        </element>
        <element name="exceptionSubpopulations" type="tns:PopulationInfectionAndImmunityCensusData" maxOccurs="unbounded" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:CensusData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The count of a specific entity in a specified region at a specified time.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:date, tns:location
Source
 
<complexType name="CensusData" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000173">
  <annotation>
    <documentation>The count of a specific entity in a specified region at a specified time.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="dateTime" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A name of a temporal region that is systematized according to a particular calendar system, such as the Gregorian calendar.</documentation>
          </annotation>
        </element>
        <element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:PopulationInfectionAndImmunityCensusDataCell
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_ageRange apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_sex apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_infectionState apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_diseaseState apollo.tmp#PopulationInfectionAndImmunityCensusDataCell_fractionInState
Used by
Model
Children tns:ageRange, tns:diseaseState, tns:fractionInState, tns:infectionState, tns:sex
Source
 
<complexType name="PopulationInfectionAndImmunityCensusDataCell">
  <sequence>
    <element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0">
    </element>
    <element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>A human social role borne by a human being being realized in behaviour which is considered socially appropriate for individuals of a specific sex in the context of a specific culture.</documentation>
      </annotation>
    </element>
    <choice>
      <element name="infectionState" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000217" type="tns:InfectionStateEnum" maxOccurs="1" minOccurs="1">
        <annotation>
          <documentation>A data item that specifies the epidemiologically-relevant state of a host organism at a specific time with respect to infection with a particular pathogen.</documentation>
        </annotation>
      </element>
      <element name="diseaseState" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
      </element>
    </choice>
    <element name="fractionInState" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000135" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:AgeRangeCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity specifying the upper and lower limit of a range of ages of continuants.
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#AgeRangeCategoryDefinition_label apollo.tmp#AgeRangeCategoryDefinition_unitOfTimeForLowerBound apollo.tmp#AgeRangeCategoryDefinition_lowerBound apollo.tmp#AgeRangeCategoryDefinition_unitOfTimeForUpperBound apollo.tmp#AgeRangeCategoryDefinition_upperBound
Type extension of tns:CategoryDefinition
Type hierarchy
Used by
Model
Children tns:label, tns:lowerBound, tns:unitOfTimeForLowerBound, tns:unitOfTimeForUpperBound, tns:upperBound
Source
 
<complexType name="AgeRangeCategoryDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000241">
  <annotation>
    <documentation>An information content entity specifying the upper and lower limit of a range of ages of continuants.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="label" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000009" type="token" maxOccurs="1" minOccurs="0"/>
        <element name="unitOfTimeForLowerBound" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="lowerBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000436" type="tns:Bound" maxOccurs="1" minOccurs="1"/>
        <element name="unitOfTimeForUpperBound" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="upperBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000447" type="tns:Bound" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:CategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="CategoryDefinition"/>
[ top ]
Simple Type tns:UnitOfTimeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration year
enumeration month
enumeration day
enumeration hour
enumeration minute
enumeration second
enumeration millisecond
Used by
Source
 
<simpleType name="UnitOfTimeEnum">
  <restriction base="string">
    <enumeration value="year"/>
    <enumeration value="month"/>
    <enumeration value="day"/>
    <enumeration value="hour"/>
    <enumeration value="minute"/>
    <enumeration value="second"/>
    <enumeration value="millisecond"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:Bound
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Bound_finiteBoundary apollo.tmp#Bound_finiteBoundaryType apollo.tmp#Bound_infiniteBoundary
Used by
Model
Children tns:finiteBoundary, tns:finiteBoundaryType, tns:infiniteBoundary
Source
 
<complexType name="Bound">
  <sequence>
    <choice>
      <element name="finiteBoundary" type="double" maxOccurs="1" minOccurs="1"/>
      <element name="finiteBoundaryType" type="tns:FiniteBoundaryTypeEnum" maxOccurs="1" minOccurs="1"/>
      <element name="infiniteBoundary" type="tns:InfinityEnum" maxOccurs="1" minOccurs="1"/>
    </choice>
  </sequence>
</complexType>
[ top ]
Simple Type tns:FiniteBoundaryTypeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration inclusive
enumeration notInclusive
Used by
Source
 
<simpleType name="FiniteBoundaryTypeEnum">
  <restriction base="string">
    <enumeration value="inclusive"/>
    <enumeration value="notInclusive"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:InfinityEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration positiveInfinity
enumeration negativeInfinity
Used by
Source
 
<simpleType name="InfinityEnum">
  <restriction base="string">
    <enumeration value="positiveInfinity"/>
    <enumeration value="negativeInfinity"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:GenderEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration M
enumeration F
enumeration U
Used by
Source
 
<simpleType name="GenderEnum">
  <restriction base="string">
    <enumeration value="M"/>
    <enumeration value="F"/>
    <enumeration value="U"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:InfectionStateEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration susceptible
enumeration greaterThanOrEqualToId50Exposure
enumeration latent
enumeration infectious
enumeration recovered
enumeration immuneAndActsLikeImmune
enumeration immuneButActsLikeNotImmune
enumeration newly_sick
Used by
Source
 
<simpleType name="InfectionStateEnum">
  <restriction base="string">
    <enumeration value="susceptible"/>
    <enumeration value="greaterThanOrEqualToId50Exposure"/>
    <enumeration value="latent"/>
    <enumeration value="infectious"/>
    <enumeration value="recovered"/>
    <enumeration value="immuneAndActsLikeImmune"/>
    <enumeration value="immuneButActsLikeNotImmune"/>
    <enumeration value="newly_sick"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:DiseaseOutcomeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration asymptomatic
enumeration symptomatic
enumeration severely symptomatic
enumeration fulminant
enumeration hospitalization
enumeration death
enumeration recovery
Used by
Source
 
<simpleType name="DiseaseOutcomeEnum">
  <restriction base="string">
    <enumeration value="asymptomatic"/>
    <enumeration value="symptomatic"/>
    <enumeration value="severely symptomatic"/>
    <enumeration value="fulminant"/>
    <enumeration value="hospitalization"/>
    <enumeration value="death"/>
    <enumeration value="recovery"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:Fraction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A dimensionless ratio unit which relates the part (the numerator) to the whole (the denominator).
Diagram
Diagram
Type restriction of double
Facets
maxInclusive 1
minInclusive 0
Used by
Source
 
<simpleType name="Fraction" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000191">
  <annotation>
    <documentation>A dimensionless ratio unit which relates the part (the numerator) to the whole (the denominator).</documentation>
  </annotation>
  <restriction base="double">
    <minInclusive value="0"/>
    <maxInclusive value="1"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:PopulationColonizationCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A population census about the organisms specific to that population that were the host in some colonization acquisition.
Diagram
Diagram
Used by
Source
 
<complexType name="PopulationColonizationCensus" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000501">
  <annotation>
    <documentation>A population census about the organisms specific to that population that were the host in some colonization acquisition.</documentation>
  </annotation>
</complexType>
[ top ]
Complex Type tns:IndividualsAndHouseholds
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualsAndHouseholds_individuals apollo.tmp#IndividualsAndHouseholds_households
Used by
Model
Children tns:households, tns:individuals
Source
 
<complexType name="IndividualsAndHouseholds">
  <sequence>
    <element name="individuals" type="tns:Individual" maxOccurs="unbounded" minOccurs="1"/>
    <element name="households" type="tns:Household" maxOccurs="unbounded" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:Individual
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
Diagram
Diagram apollo.tmp#Individual_individualId apollo.tmp#Individual_age apollo.tmp#Individual_characteristics
Used by
Model
Children tns:age, tns:characteristics, tns:individualId
Source
 
<complexType name="Individual" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0100026">
  <annotation>
    <documentation>A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.</documentation>
  </annotation>
  <sequence>
    <element name="individualId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
    </element>
    <element name="age" type="tns:FixedDuration" maxOccurs="1" minOccurs="0"/>
    <element name="characteristics" type="tns:Characteristic" maxOccurs="unbounded" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:FixedDuration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A duration that is specified as a single number.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration apollo.tmp#FixedDuration_value
Type extension of tns:Duration
Type hierarchy
Used by
Model
Children tns:referenceId, tns:unitOfTime, tns:value
Source
 
<complexType name="FixedDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000384">
  <annotation>
    <documentation>A duration that is specified as a single number.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Duration">
      <sequence>
        <element name="value" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:Duration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum that quantifies a temporal region that is occupied by a processual entity.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId
Type extension of tns:ParameterValue
Type hierarchy
Used by
Model
Children tns:referenceId, tns:unitOfTime
Source
 
<complexType name="Duration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000243">
  <annotation>
    <documentation>A measurement datum that quantifies a temporal region that is occupied by a processual entity.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ParameterValue">
      <sequence>
        <element name="unitOfTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000003" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1"/>
        <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An identifier that is an integer numeral that denotes some citation.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:NonNegativeDouble
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of double
Facets
minInclusive 0
Used by
Source
 
<simpleType name="NonNegativeDouble">
  <restriction base="double">
    <minInclusive value="0"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:Characteristic
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Characteristic_enumeratedName apollo.tmp#Characteristic_userInventedName apollo.tmp#Characteristic_value
Used by
Model
Children tns:enumeratedName, tns:userInventedName, tns:value
Source
 
<complexType name="Characteristic">
  <sequence>
    <choice>
      <element name="enumeratedName" type="tns:CharacteristicEnum" maxOccurs="1" minOccurs="1">
      </element>
      <element name="userInventedName" type="string" maxOccurs="1" minOccurs="1"/>
    </choice>
    <element name="value" type="tns:CategoryDefinition" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:CharacteristicEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration maritalStatus
enumeration schoolingStatus
enumeration employmentStatus
enumeration occupation
enumeration disabilityStatus
Used by
Source
 
<simpleType name="CharacteristicEnum">
  <restriction base="string">
    <enumeration value="maritalStatus"/>
    <enumeration value="schoolingStatus"/>
    <enumeration value="employmentStatus"/>
    <enumeration value="occupation"/>
    <enumeration value="disabilityStatus"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:Household
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A human or collection of humans that occupies a housing unit by storing their possessions there and habitually sleeping there thereby participating in the realization of its residence function.
Diagram
Diagram apollo.tmp#Household_householdId apollo.tmp#Household_groupQuarters apollo.tmp#Household_unRelated apollo.tmp#Household_individualIds
Used by
Model
Children tns:groupQuarters, tns:householdId, tns:individualIds, tns:unRelated
Source
 
<complexType name="Household" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000076">
  <annotation>
    <documentation>A human or collection of humans that occupies a housing unit by storing their possessions there and habitually sleeping there thereby participating in the realization of its residence function.</documentation>
  </annotation>
  <sequence>
    <element name="householdId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
    <element name="groupQuarters" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="0"/>
    <element name="unRelated" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="0"/>
    <element name="individualIds" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:PointerToData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PointerToData_dataType apollo.tmp#PointerToData_xmlFormat apollo.tmp#PointerToData_csvFormat
Used by
Model
Children tns:csvFormat, tns:dataType, tns:xmlFormat
Source
 
<complexType name="PointerToData">
  <sequence>
    <element name="dataType" type="tns:DataTypeEnum" maxOccurs="1" minOccurs="1">
    </element>
    <choice>
      <element name="xmlFormat" type="anyURI" maxOccurs="1" minOccurs="1"/>
      <element name="csvFormat" type="anyURI" maxOccurs="1" minOccurs="1">
      </element>
    </choice>
  </sequence>
</complexType>
[ top ]
Simple Type tns:DataTypeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration SyntheticEcosystem
Used by
Source
 
<simpleType name="DataTypeEnum">
  <restriction base="string">
    <enumeration value="SyntheticEcosystem"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:IndividualBiologyAndBehavior
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualBiologyAndBehavior_lifeCycle apollo.tmp#IndividualBiologyAndBehavior_reproduction apollo.tmp#IndividualBiologyAndBehavior_behavior
Used by
Model
Children tns:behavior, tns:lifeCycle, tns:reproduction
Source
 
<complexType name="IndividualBiologyAndBehavior">
  <sequence>
    <element name="lifeCycle" type="tns:LifeCycle" maxOccurs="1" minOccurs="0"/>
    <element name="reproduction" type="tns:Reproduction" maxOccurs="1" minOccurs="0">
    </element>
    <element name="behavior" type="tns:Behavior" maxOccurs="1" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:LifeCycle
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A processual entity which has as parts all the processes in which a given organism is participant.
Diagram
Diagram apollo.tmp#LifeCycle_lifeStagesWithDurationsAndMortalities
Used by
Model
Children tns:lifeStagesWithDurationsAndMortalities
Source
 
<complexType name="LifeCycle" sawsdl:modelReference="http://purl.obolibrary.org/obo/OGMS_0000092">
  <annotation>
    <documentation>A processual entity which has as parts all the processes in which a given organism is participant.</documentation>
  </annotation>
  <sequence>
    <element name="lifeStagesWithDurationsAndMortalities" type="tns:LifeStageWithDurationAndMortality" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:LifeStageWithDurationAndMortality
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data structure that refers to (1) a subpopulation of a population based on life stage, (2) the rate of mortality of that subpopulation, and (3) the average duration of time that the individuals in the subpopulation spend in that life stage.
Diagram
Diagram apollo.tmp#LifeStageWithDurationAndMortality_stage apollo.tmp#LifeStageWithDurationAndMortality_duration apollo.tmp#LifeStageWithDurationAndMortality_mortalityRate apollo.tmp#LifeStageWithDurationAndMortality_mortalityFunction
Used by
Model
Children tns:duration, tns:mortalityFunction, tns:mortalityRate, tns:stage
Source
 
<complexType name="LifeStageWithDurationAndMortality" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000417">
  <annotation>
    <documentation>A data structure that refers to (1) a subpopulation of a population based on life stage, (2) the rate of mortality of that subpopulation, and (3) the average duration of time that the individuals in the subpopulation spend in that life stage.</documentation>
  </annotation>
  <sequence>
    <element name="stage" type="tns:DevelopmentalStageEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="duration" type="tns:Duration" maxOccurs="1" minOccurs="1">
    </element>
    <choice>
      <element name="mortalityRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000445" type="tns:Rate" maxOccurs="1" minOccurs="1">
        <annotation>
          <documentation>A rate measurement datum that specifies the percentage of organisms within a population that have died over a given time interval.</documentation>
        </annotation>
      </element>
      <element name="mortalityFunction" type="tns:MortalityFunction" maxOccurs="1" minOccurs="1">
      </element>
    </choice>
  </sequence>
</complexType>
[ top ]
Simple Type tns:DevelopmentalStageEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration egg
enumeration larval
enumeration pupal
enumeration larvalAndPupal
enumeration adultForm
Used by
Source
 
<simpleType name="DevelopmentalStageEnum">
  <restriction base="string">
    <enumeration value="egg"/>
    <enumeration value="larval"/>
    <enumeration value="pupal"/>
    <enumeration value="larvalAndPupal"/>
    <enumeration value="adultForm"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:Rate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A unit which represents a standard measurement occurrence of a process per unit time.
Diagram
Diagram apollo.tmp#Rate_numeratorUnitOfMeasure apollo.tmp#Rate_denominatorUnitOfMeasure apollo.tmp#Rate_value apollo.tmp#Rate_probabilityDistribution
Used by
Model
Children tns:denominatorUnitOfMeasure, tns:numeratorUnitOfMeasure, tns:probabilityDistribution, tns:value
Source
 
<complexType name="Rate" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000280">
  <annotation>
    <documentation>A unit which represents a standard measurement occurrence of a process per unit time.</documentation>
  </annotation>
  <sequence>
    <element name="numeratorUnitOfMeasure" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="denominatorUnitOfMeasure" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
    </element>
    <choice>
      <element name="value" type="double" maxOccurs="1" minOccurs="1">
      </element>
      <element name="probabilityDistribution" type="tns:ProbabilityDistribution" maxOccurs="1" minOccurs="1">
      </element>
    </choice>
  </sequence>
</complexType>
[ top ]
Simple Type tns:UnitOfMeasureEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration dollars
enumeration euros
enumeration weight_in_pounds
enumeration weight_in_kilograms
enumeration seconds
enumeration minutes
enumeration hours
enumeration days
enumeration weeks
enumeration months
enumeration years
enumeration percent
enumeration cases
enumeration meters
enumeration inches
enumeration miles
enumeration daily_dose
enumeration percent_of_population_vaccinated
enumeration visits
enumeration inoculations
enumeration perIndividualPerYear
enumeration house
enumeration insecticideTreatedNets
enumeration individualTreatments
enumeration netHoles
Used by
Source
 
<simpleType name="UnitOfMeasureEnum">
  <restriction base="string">
    <enumeration value="dollars"/>
    <enumeration value="euros"/>
    <enumeration value="weight_in_pounds"/>
    <enumeration value="weight_in_kilograms"/>
    <enumeration value="seconds"/>
    <enumeration value="minutes"/>
    <enumeration value="hours"/>
    <enumeration value="days"/>
    <enumeration value="weeks"/>
    <enumeration value="months"/>
    <enumeration value="years"/>
    <enumeration value="percent"/>
    <enumeration value="cases"/>
    <enumeration value="meters"/>
    <enumeration value="inches"/>
    <enumeration value="miles"/>
    <enumeration value="daily_dose"/>
    <enumeration value="percent_of_population_vaccinated"/>
    <enumeration value="visits"/>
    <enumeration value="inoculations"/>
    <enumeration value="perIndividualPerYear"/>
    <enumeration value="house"/>
    <enumeration value="insecticideTreatedNets"/>
    <enumeration value="individualTreatments"/>
    <enumeration value="netHoles"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:ProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that assigns a probability to each measurable subset of the possible outcomes of a random experiment, survey, or procedure of statistical inference.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId
Type extension of tns:UncertainValue
Type hierarchy
Used by
Model
Children tns:referenceId
Source
 
<complexType name="ProbabilityDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000215">
  <annotation>
    <documentation>An information content entity that assigns a probability to each measurable subset of the possible outcomes of a random experiment, survey, or procedure of statistical inference.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:UncertainValue">
      <sequence>
        <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:UncertainValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="UncertainValue"/>
[ top ]
Complex Type tns:MortalityFunction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="MortalityFunction" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000403"/>
[ top ]
Complex Type tns:Reproduction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="Reproduction" sawsdl:modelReference="http://purl.org/obo/owl/GO#GO_0000003">
</complexType>
[ top ]
Complex Type tns:Behavior
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.
Diagram
Diagram
Used by
Source
 
<complexType name="Behavior" sawsdl:modelReference="http://purl.obolibrary.org/obo/GO_0007610">
  <annotation>
    <documentation>The internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.</documentation>
  </annotation>
</complexType>
[ top ]
Complex Type tns:Infection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
an infection in an ecosystem occurring in one population of organisms
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Infection_pathogen apollo.tmp#Infection_host apollo.tmp#Infection_infectiousDiseases apollo.tmp#Infection_infectionAcquisitionsFromInfectedHosts apollo.tmp#Infection_infectionAcquisitionsFromContaminatedThings apollo.tmp#Infection_InfectionAcquisitionsFromColonizedHosts
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:InfectionAcquisitionsFromColonizedHosts, tns:host, tns:infectionAcquisitionsFromContaminatedThings, tns:infectionAcquisitionsFromInfectedHosts, tns:infectiousDiseases, tns:pathogen
Source
 
<complexType name="Infection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000331">
  <annotation>
    <documentation>an infection in an ecosystem occurring in one population of organisms</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An organism of a particular biological taxon that is the bearer of an infectious dispositions towards an organism of a different particular biological taxon.</documentation>
          </annotation>
        </element>
        <element name="host" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000238" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An organism of a particular biological taxon that is the site of reproduction of an organism of a different taxon.</documentation>
          </annotation>
        </element>
        <element name="infectiousDiseases" type="tns:InfectiousDisease" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="infectionAcquisitionsFromInfectedHosts" type="tns:InfectionAcquisitionFromInfectedHost" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="infectionAcquisitionsFromContaminatedThings" type="tns:InfectionAcquisitionFromContaminatedAbioticThing" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="InfectionAcquisitionsFromColonizedHosts" type="tns:InfectionAcquisitionFromColonizedHost" maxOccurs="unbounded" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:InfectiousDisease
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A disease that inheres in a host and, when realized, is realized as a disease course that is causally preceded by an infection.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDisease_disease apollo.tmp#InfectiousDisease_speciesWithDisease apollo.tmp#InfectiousDisease_causalPathogen apollo.tmp#InfectiousDisease_incubationPeriod apollo.tmp#InfectiousDisease_prodromalPeriod apollo.tmp#InfectiousDisease_fulminantPeriod apollo.tmp#InfectiousDisease_otherIntervals apollo.tmp#InfectiousDisease_diseaseOutcomesWithProbabilities
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:causalPathogen, tns:disease, tns:diseaseOutcomesWithProbabilities, tns:fulminantPeriod, tns:incubationPeriod, tns:otherIntervals, tns:prodromalPeriod, tns:speciesWithDisease
Source
 
<complexType name="InfectiousDisease" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000239">
  <annotation>
    <documentation>A disease that inheres in a host and, when realized, is realized as a disease course that is causally preceded by an infection.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="disease" sawsdl:modelReference="http://purl.obolibrary.org/obo/OGMS_0000031" type="tns:SnomedId" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.</documentation>
          </annotation>
        </element>
        <element name="speciesWithDisease" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000484" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An identifier curated by the NCBI taxonomy database that has been used to specify the species of some organism in which some disease has been realized.</documentation>
          </annotation>
        </element>
        <element name="causalPathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
        <element name="incubationPeriod" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000317" type="tns:Duration" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A process that is part of an infectious disease course, has the same beginning temporal boundary as the disease course, and has an ending temporal boundary at the onset of symptoms due to the infectious disease.</documentation>
          </annotation>
        </element>
        <element name="prodromalPeriod" type="tns:Duration" maxOccurs="1" minOccurs="0">
        </element>
        <element name="fulminantPeriod" type="tns:Duration" maxOccurs="1" minOccurs="0">
        </element>
        <element name="otherIntervals" type="tns:Interval" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="diseaseOutcomesWithProbabilities" type="tns:DiseaseOutcomeWithProbability" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:SnomedId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by IHTSDO that refers to some representational unit within its class hierarchy.
Diagram
Diagram
Type restriction of token
Facets
pattern [0-9]
Used by
Source
 
<simpleType name="SnomedId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000469">
  <annotation>
    <documentation>An identifier curated by IHTSDO that refers to some representational unit within its class hierarchy.</documentation>
  </annotation>
  <restriction base="token">
    <pattern value="[0-9]"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:Interval
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Interval_startBoundaryDefinition apollo.tmp#Interval_endBoundaryDefinition apollo.tmp#Interval_duration apollo.tmp#Interval_readableTitle apollo.tmp#Interval_referenceId
Used by
Model
Children tns:duration, tns:endBoundaryDefinition, tns:readableTitle, tns:referenceId, tns:startBoundaryDefinition
Source
 
<complexType name="Interval" sawsdl:modelReference="http://purl.obolibrary.org/obo/BFO_0000038">
  <sequence>
    <element name="startBoundaryDefinition" type="tns:IntervalBoundaryDefinitionEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="endBoundaryDefinition" type="tns:IntervalBoundaryDefinitionEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="duration" type="tns:Duration" maxOccurs="1" minOccurs="1">
    </element>
    <element name="readableTitle" type="token" maxOccurs="1" minOccurs="0">
    </element>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:IntervalBoundaryDefinitionEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration timeOfFirstSymptom
enumeration timeOfRecovery
enumeration timeOfHospitalAdmission
enumeration timeOfHospitalDischarge
enumeration timeOfDeath
enumeration timeOfWhoNotification
enumeration timeOfCaseDetection
Used by
Source
 
<simpleType name="IntervalBoundaryDefinitionEnum">
  <restriction base="string">
    <enumeration value="timeOfFirstSymptom"/>
    <enumeration value="timeOfRecovery"/>
    <enumeration value="timeOfHospitalAdmission"/>
    <enumeration value="timeOfHospitalDischarge"/>
    <enumeration value="timeOfDeath"/>
    <enumeration value="timeOfWhoNotification"/>
    <enumeration value="timeOfCaseDetection"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:DiseaseOutcomeWithProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A predicted data item expressing the probability that a disease outcome occurs during the disease course of an organism.
Diagram
Diagram apollo.tmp#DiseaseOutcomeWithProbability_title apollo.tmp#DiseaseOutcomeWithProbability_diseaseOutcome apollo.tmp#DiseaseOutcomeWithProbability_probability
Used by
Model
Children tns:diseaseOutcome, tns:probability, tns:title
Source
 
<complexType name="DiseaseOutcomeWithProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000428">
  <annotation>
    <documentation>A predicted data item expressing the probability that a disease outcome occurs during the disease course of an organism.</documentation>
  </annotation>
  <sequence>
    <element name="title" type="string" maxOccurs="1" minOccurs="0">
    </element>
    <element name="diseaseOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000204" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="probability" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ProbabilisticParameter
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#ProbabilisticParameter_probability apollo.tmp#ProbabilisticParameter_probabilityDistribution
Type extension of tns:ParameterValue
Type hierarchy
Used by
Model
Children tns:probability, tns:probabilityDistribution
Source
 
<complexType name="ProbabilisticParameter">
  <complexContent>
    <extension base="tns:ParameterValue">
      <sequence>
        <choice>
          <element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
          <element name="probabilityDistribution" type="tns:ProbabilityDistribution" maxOccurs="1" minOccurs="1"/>
        </choice>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:Probability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item that is about a proposition and has a numeric value between 0 and 1, inclusive, that is the output of some process of inference, such that 1) logical falsehoods and logical truths are assigned a value of 0 and 1, respectively, while contingent propositions are assigned some intermediate value; and 2) the process of inference conforms with rules for the calculation of probabilities, and that any interpretation of probability must specify the extent to which probabilities might be used to constrain the degrees of belief of rational agents.
Diagram
Diagram
Type restriction of double
Facets
maxInclusive 1
minInclusive 0
Used by
Elements tns:AntiviralTreatmentEfficacy/tns:efficacy, tns:BorderControlMeasure/tns:probabilityEntryDenied, tns:BorderControlMeasure/tns:probabilityExitDenied, tns:ConditionalProbabilityTable/tns:parametricDistribution, tns:ConditionalProbabilityTable/tns:pointProbabilities, tns:ContactModelForPlace/tns:probSeverelyInfectedIndividualAbsent, tns:ContactModelForPlace/tns:probSymptomaticIndividualAbsent, tns:ContactModelForSetting/tns:probSevereInfectionClinicallyDetected, tns:ContactModelForSetting/tns:probSymptomaticInfectionClinicallyDetected, tns:DecolonizationControlMeasure/tns:relapseProbability, tns:DischargeDestinationAndProbability/tns:probability, tns:DischargePathAndProbability/tns:probability, tns:DiseaseSurveillanceCapability/tns:sensitivityOfCaseDetection, tns:DiseaseSurveillanceCapability/tns:specificityOfCaseDetection, tns:DrugTreatmentEfficacyForSimulatorConfiguration/tns:averageDrugEfficacy, tns:InsecticideTreatedNetControlMeasure/tns:nightlyProbabilityOfUse, tns:ModelIdAndProbability/tns:probability, tns:MosquitoBehavior/tns:matingProbability, tns:ProbabilisticParameter/tns:probability, tns:ProbabilityValuePair/tns:probability, tns:ReceivingDestinationAndProbability/tns:probability, tns:TransmissionProbability/tns:probability, tns:TreatmentSurveillanceCapability/tns:sensitivityOfTreatmentDetection, tns:TreatmentSurveillanceCapability/tns:specificityOfTreatmentDetection, tns:VaccinationEfficacyConditionedOnTimeSinceDose/tns:vaccinationEfficacyConditionedOnTimeSinceMostRecentDose, tns:VaccinationEfficacyForSimulatorConfiguration/tns:averageVaccinationEfficacy, tns:WithinGroupTransmissionProbability/tns:probability
Source
 
<simpleType name="Probability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000470">
  <annotation>
    <documentation>A data item that is about a proposition and has a numeric value between 0 and 1, inclusive, that is the output of some process of inference, such that 1) logical falsehoods and logical truths are assigned a value of 0 and 1, respectively, while contingent propositions are assigned some intermediate value; and 2) the process of inference conforms with rules for the calculation of probabilities, and that any interpretation of probability must specify the extent to which probabilities might be used to constrain the degrees of belief of rational agents.</documentation>
  </annotation>
  <restriction base="double">
    <minInclusive value="0"/>
    <maxInclusive value="1"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:InfectionAcquisitionFromInfectedHost
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infection acquisition whereby a susceptible host acquires an infection from an infectious host.
Diagram
Diagram apollo.tmp#InfectionAcquisitionFromInfectedHost_infectedHost apollo.tmp#InfectionAcquisitionFromInfectedHost_latentPeriodDuration apollo.tmp#InfectionAcquisitionFromInfectedHost_infectiousPeriodDuration apollo.tmp#InfectionAcquisitionFromInfectedHost_basicReproductionNumbers apollo.tmp#InfectionAcquisitionFromInfectedHost_beta apollo.tmp#InfectionAcquisitionFromInfectedHost_transmissionProbabilities apollo.tmp#InfectionAcquisitionFromInfectedHost_inoculationRate
Used by
Model
Children tns:basicReproductionNumbers, tns:beta, tns:infectedHost, tns:infectiousPeriodDuration, tns:inoculationRate, tns:latentPeriodDuration, tns:transmissionProbabilities
Source
 
<complexType name="InfectionAcquisitionFromInfectedHost" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000265">
  <annotation>
    <documentation>An infection acquisition whereby a susceptible host acquires an infection from an infectious host.</documentation>
  </annotation>
  <sequence>
    <element name="infectedHost" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
    <element name="latentPeriodDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000017" type="tns:Duration" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>A duration of the time interval between the host acquiring an infection and the host bearing a contagiousness disposition during the same disease course within a population of hosts.</documentation>
      </annotation>
    </element>
    <element name="infectiousPeriodDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000016" type="tns:Duration" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>A duration of the parts of an infection during which the host bears an infectious disposition in a population of hosts.</documentation>
      </annotation>
    </element>
    <choice>
      <element name="basicReproductionNumbers" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000002" type="tns:ReproductionNumber" maxOccurs="unbounded" minOccurs="1">
        <annotation>
          <documentation>The average number of transmissions of an infectious agent from an infectious organism to a susceptible organism within a completely susceptible population.</documentation>
        </annotation>
      </element>
      <element name="beta" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000191" type="tns:Rate" maxOccurs="1" minOccurs="1"/>
      <element name="transmissionProbabilities" type="tns:TransmissionProbability" maxOccurs="unbounded" minOccurs="1"/>
      <!-- <element name="forGlobalEpidemicSimulator" type="tns:GesParametersForContactAndTransmission"
                    maxOccurs="1" minOccurs="1"/> -->
      <element name="inoculationRate" type="tns:Rate" maxOccurs="1" minOccurs="0"/>
    </choice>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ReproductionNumber
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The average value of transmissions of the infectious agent from one infected organism to another, resulting in an infection.
Diagram
Diagram apollo.tmp#ReproductionNumber_exactValue apollo.tmp#ReproductionNumber_uncertainValue apollo.tmp#ReproductionNumber_referenceId
Used by
Model
Children tns:exactValue, tns:referenceId, tns:uncertainValue
Source
 
<complexType name="ReproductionNumber" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000043">
  <annotation>
    <documentation>The average value of transmissions of the infectious agent from one infected organism to another, resulting in an infection.</documentation>
  </annotation>
  <sequence>
    <choice>
      <element name="exactValue" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
      </element>
      <element name="uncertainValue" type="tns:UncertainValue" maxOccurs="1" minOccurs="1">
      </element>
    </choice>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:TransmissionProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The probability of the occurence of an infection acquisition from one infected organism to another when in contact.
Diagram
Diagram apollo.tmp#TransmissionProbability_contactDefinition apollo.tmp#TransmissionProbability_contactDefinitionText apollo.tmp#TransmissionProbability_probability
Used by
Model
Children tns:contactDefinition, tns:contactDefinitionText, tns:probability
Source
 
<complexType name="TransmissionProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000211">
  <annotation>
    <documentation>The probability of the occurence of an infection acquisition from one infected organism to another when in contact.</documentation>
  </annotation>
  <sequence>
    <element name="contactDefinition" type="tns:ContactDefinitionEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="contactDefinitionText" type="token" maxOccurs="1" minOccurs="0">
    </element>
    <element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:ContactDefinitionEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration primaryContact
enumeration secondaryContact
enumeration infectedMosquitoBitesSusceptibleHuman
enumeration susceptibleMosquitoBitesInfectiousHuman
enumeration parenteralInjection
enumeration physicalContact
enumeration contactWithBodyFluids
enumeration assistedChildbirthOfInfectedMother
Used by
Source
 
<simpleType name="ContactDefinitionEnum">
  <restriction base="string">
    <enumeration value="primaryContact"/>
    <enumeration value="secondaryContact"/>
    <enumeration value="infectedMosquitoBitesSusceptibleHuman"/>
    <enumeration value="susceptibleMosquitoBitesInfectiousHuman"/>
    <enumeration value="parenteralInjection"/>
    <enumeration value="physicalContact"/>
    <enumeration value="contactWithBodyFluids"/>
    <enumeration value="assistedChildbirthOfInfectedMother"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:InfectionAcquisitionFromContaminatedAbioticThing
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infection acquisition whereby a susceptible host acquires an infection from a contaminated thing.
Diagram
Diagram apollo.tmp#InfectionAcquisitionFromContaminatedAbioticThing_contaminatedAbioticThing apollo.tmp#InfectionAcquisitionFromContaminatedAbioticThing_transmissionProbability
Used by
Model
Children tns:contaminatedAbioticThing, tns:transmissionProbability
Source
 
<complexType name="InfectionAcquisitionFromContaminatedAbioticThing" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000264">
  <annotation>
    <documentation>An infection acquisition whereby a susceptible host acquires an infection from a contaminated thing.</documentation>
  </annotation>
  <sequence>
    <element name="contaminatedAbioticThing" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000571" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An abiotic ecosystem element that is participant in some biological contamination process.</documentation>
      </annotation>
    </element>
    <element name="transmissionProbability" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:AbioticThingEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration workplace
enumeration pigFarm
enumeration chickenFarm
enumeration household
enumeration community
enumeration ovipositionSite
enumeration syringe
enumeration bushMeat
Used by
Source
 
<simpleType name="AbioticThingEnum">
  <restriction base="string">
    <enumeration value="preschool"/>
    <enumeration value="primarySchool"/>
    <enumeration value="secondarySchool"/>
    <enumeration value="workplace"/>
    <enumeration value="pigFarm"/>
    <enumeration value="chickenFarm"/>
    <enumeration value="household"/>
    <enumeration value="community"/>
    <enumeration value="ovipositionSite"/>
    <enumeration value="syringe"/>
    <enumeration value="bushMeat"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:InfectionAcquisitionFromColonizedHost
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionAcquisitionFromColonizedHost_colonizedHost apollo.tmp#InfectionAcquisitionFromColonizedHost_transmissionProbability apollo.tmp#InfectionAcquisitionFromColonizedHost_beta
Used by
Model
Children tns:beta, tns:colonizedHost, tns:transmissionProbability
Source
 
<complexType name="InfectionAcquisitionFromColonizedHost">
  <sequence>
    <element name="colonizedHost" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
    <choice>
      <element name="transmissionProbability" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
      <element name="beta" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000191" type="string" maxOccurs="1" minOccurs="1">
        <annotation>
          <documentation>An information content entity that represents the rate that an infection moves from infected individuals to susceptible individuals in a population.</documentation>
        </annotation>
      </element>
    </choice>
  </sequence>
</complexType>
[ top ]
Complex Type tns:Colonization
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
a reproduction of a pathogen of a particular biological taxon inside a host organism of another taxon, without invasion of the tissues of the host.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Colonization_pathogen apollo.tmp#Colonization_host apollo.tmp#Colonization_colonizationDuration apollo.tmp#Colonization_probabilityOfInfectionOverTime apollo.tmp#Colonization_colonizationAcquisition
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:colonizationAcquisition, tns:colonizationDuration, tns:host, tns:pathogen, tns:probabilityOfInfectionOverTime
Source
 
<complexType name="Colonization" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000330">
  <annotation>
    <documentation>a reproduction of a pathogen of a particular biological taxon inside a host organism of another taxon, without invasion of the tissues of the host.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
        <element name="host" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000238" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
        </element>
        <element name="colonizationDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000490" type="tns:Duration" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A duration that measures the temporal interval occupied by some colonization.</documentation>
          </annotation>
        </element>
        <element name="probabilityOfInfectionOverTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000530" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A conditional probability whose value is dependent upon the duration of some colonization or infection.</documentation>
          </annotation>
        </element>
        <element name="colonizationAcquisition" type="tns:ColonizationAcquisition" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ConditionalProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A probability distribution of two jointly distributed random variables X and Y, where Y is know to be a particular value.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#ConditionalProbabilityDistribution_firstConditioningVariable
Type extension of tns:ProbabilityDistribution
Type hierarchy
Used by
Model
Children tns:firstConditioningVariable, tns:referenceId
Source
 
<complexType name="ConditionalProbabilityDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000245">
  <annotation>
    <documentation>A probability distribution of two jointly distributed random variables X and Y, where Y is know to be a particular value.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ProbabilityDistribution">
      <sequence>
        <element name="firstConditioningVariable" type="tns:ConditioningVariable" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ConditioningVariable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ConditioningVariable_name apollo.tmp#ConditioningVariable_categories
Used by
Model
Children tns:categories, tns:name
Source
 
<complexType name="ConditioningVariable">
  <sequence>
    <element name="name" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0020000" type="tns:CategoricalVariableEnum" maxOccurs="1" minOccurs="1"/>
    <element name="categories" type="tns:CategoryValueNode" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:CategoricalVariableEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration gender
enumeration biologicalSex
enumeration sex
enumeration ageRange
enumeration timeSpan
enumeration diseaseOutcome
enumeration sourceOfInfection
enumeration householdMedianIncome
enumeration maritalStatus
enumeration schoolingStatus
enumeration disabilityStatus
enumeration employmentStatus
enumeration place
enumeration measuredQuantityRange
enumeration location
Used by
Source
 
<simpleType name="CategoricalVariableEnum">
  <restriction base="string">
    <enumeration value="gender"/>
    <enumeration value="biologicalSex"/>
    <enumeration value="sex"/>
    <enumeration value="ageRange"/>
    <enumeration value="timeSpan"/>
    <enumeration value="diseaseOutcome"/>
    <enumeration value="sourceOfInfection"/>
    <enumeration value="householdMedianIncome"/>
    <enumeration value="maritalStatus"/>
    <enumeration value="schoolingStatus"/>
    <enumeration value="disabilityStatus"/>
    <enumeration value="employmentStatus"/>
    <enumeration value="place"/>
    <enumeration value="measuredQuantityRange"/>
    <enumeration value="location"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:CategoryValueNode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryValueNode_categoryDefinition apollo.tmp#CategoryValueNode_value apollo.tmp#CategoryValueNode_unconditionalProbabilityDistribution apollo.tmp#CategoryValueNode_nextCategoricalVariable
Used by
Model
Children tns:categoryDefinition, tns:nextCategoricalVariable, tns:unconditionalProbabilityDistribution, tns:value
Source
 
<complexType name="CategoryValueNode">
  <sequence>
    <element name="categoryDefinition" type="tns:CategoryDefinition" maxOccurs="1" minOccurs="1"/>
    <choice>
      <element name="value" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
      <element name="unconditionalProbabilityDistribution" type="tns:UnconditionalProbabilityDistribution" maxOccurs="1" minOccurs="1"/>
      <element name="nextCategoricalVariable" type="tns:CategoricalVariableNode" maxOccurs="1" minOccurs="1"/>
    </choice>
  </sequence>
</complexType>
[ top ]
Complex Type tns:UnconditionalProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An unconditional probability distribution is the probability distribution of an uncertain variable, U, implicitly incorporating the uncertainty introduced by any other relevant variables. Mathematically, U’s unconditional probability distribution is written {U | E}, where E represents the background state of information under which the distribution is assessed.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution
Type extension of tns:ProbabilityDistribution
Type hierarchy
Used by
Model
Children tns:referenceId
Source
 
<complexType name="UnconditionalProbabilityDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000247">
  <annotation>
    <documentation>An unconditional probability distribution is the probability distribution of an uncertain variable, U, implicitly incorporating the uncertainty introduced by any other relevant variables. Mathematically, U’s unconditional probability distribution is written {U | E}, where E represents the background state of information under which the distribution is assessed.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ProbabilityDistribution"/>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:CategoricalVariableNode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoricalVariableNode_name apollo.tmp#CategoricalVariableNode_categories
Used by
Model
Children tns:categories, tns:name
Source
 
<complexType name="CategoricalVariableNode">
  <sequence>
    <element name="name" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0020000" type="tns:CategoricalVariableEnum" maxOccurs="1" minOccurs="1"/>
    <element name="categories" type="tns:CategoryValueNode" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ColonizationAcquisition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
a biological process where a pathogen organism of a particular biological taxon enters into a host organism of a particular taxon and begins to undergo reproduction in a location external to tissues of the host
Diagram
Diagram apollo.tmp#ColonizationAcquisition_infectiousHostSource apollo.tmp#ColonizationAcquisition_contaminatedSource apollo.tmp#ColonizationAcquisition_colonizedHost apollo.tmp#ColonizationAcquisition_transmissionProbability apollo.tmp#ColonizationAcquisition_beta
Used by
Model
Children tns:beta, tns:colonizedHost, tns:contaminatedSource, tns:infectiousHostSource, tns:transmissionProbability
Source
 
<complexType name="ColonizationAcquisition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000332">
  <annotation>
    <documentation>a biological process where a pathogen organism of a particular biological taxon enters into a host organism of a particular taxon and begins to undergo reproduction in a location external to tissues of the host</documentation>
  </annotation>
  <sequence>
    <choice>
      <element name="infectiousHostSource" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
      <element name="contaminatedSource" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1"/>
      <element name="colonizedHost" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
      </element>
    </choice>
    <choice>
      <element name="transmissionProbability" type="tns:TransmissionProbability" maxOccurs="1" minOccurs="1"/>
      <element name="beta" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000191" type="tns:Rate" maxOccurs="unbounded" minOccurs="1"/>
    </choice>
  </sequence>
</complexType>
[ top ]
Complex Type tns:Contamination
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The process of existence without reproduction of a pathogen of a particular biological taxon in or on some material entity or the process of reproduction of a pathogen in or on a material entity that is not an organism.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Contamination_pathogen apollo.tmp#Contamination_abioticThing apollo.tmp#Contamination_contaminationDuration apollo.tmp#Contamination_contaminationAcquisition
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:abioticThing, tns:contaminationAcquisition, tns:contaminationDuration, tns:pathogen
Source
 
<complexType name="Contamination" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000186">
  <annotation>
    <documentation>The process of existence without reproduction of a pathogen of a particular biological taxon in or on some material entity or the process of reproduction of a pathogen in or on a material entity that is not an organism.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
        <element name="abioticThing" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1"/>
        <element name="contaminationDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000505" type="tns:Duration" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A duration that measures a temporal region occupied by some contamination.</documentation>
          </annotation>
        </element>
        <element name="contaminationAcquisition" type="tns:ContaminationAcquisition" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ContaminationAcquisition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A biological process whereby an entity that is not in contact with a pathogen of a particular biological taxon begins to undergo contamination with that pathogen.
Diagram
Diagram apollo.tmp#ContaminationAcquisition_infectiousHostSource apollo.tmp#ContaminationAcquisition_contaminatedSource apollo.tmp#ContaminationAcquisition_colonizedHostSource apollo.tmp#ContaminationAcquisition_transmissionProbability
Used by
Model
Children tns:colonizedHostSource, tns:contaminatedSource, tns:infectiousHostSource, tns:transmissionProbability
Source
 
<complexType name="ContaminationAcquisition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000167">
  <annotation>
    <documentation>A biological process whereby an entity that is not in contact with a pathogen of a particular biological taxon begins to undergo contamination with that pathogen.</documentation>
  </annotation>
  <sequence>
    <choice>
      <element name="infectiousHostSource" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
      <element name="contaminatedSource" type="token" maxOccurs="1" minOccurs="1"/>
      <element name="colonizedHostSource" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
    </choice>
    <element name="transmissionProbability" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ContaminatedThingCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A census about contaminated things of a given type in an area of interest.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#ContaminatedThingCensus_kindOfThing apollo.tmp#ContaminatedThingCensus_pathogen apollo.tmp#ContaminatedThingCensus_censusData
Type extension of tns:Census
Type hierarchy
Used by
Model
Children tns:censusData, tns:description, tns:kindOfThing, tns:location, tns:pathogen, tns:referenceDate, tns:simulatorTime
Source
 
<complexType name="ContaminatedThingCensus" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000201">
  <annotation>
    <documentation>A census about contaminated things of a given type in an area of interest.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Census">
      <sequence>
        <element name="kindOfThing" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
        <element name="censusData" type="tns:ContaminatedThingCensusData" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ContaminatedThingCensusData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#ContaminatedThingCensusData_fractionContaminated apollo.tmp#ContaminatedThingCensusData_exceptionSublocations
Type extension of tns:CensusData
Type hierarchy
Used by
Model
Children tns:date, tns:exceptionSublocations, tns:fractionContaminated, tns:location
Source
 
<complexType name="ContaminatedThingCensusData">
  <complexContent>
    <extension base="tns:CensusData">
      <sequence>
        <element name="fractionContaminated" type="tns:Fraction" maxOccurs="1" minOccurs="1">
        </element>
        <element name="exceptionSublocations" type="tns:ContaminatedThingCensusData" maxOccurs="unbounded" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:AbioticThingCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A census of entities of a certain type or types in the abiotic ecosystem.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#AbioticThingCensus_abioticThing
Type extension of tns:Census
Type hierarchy
Used by
Model
Children tns:abioticThing, tns:description, tns:location, tns:referenceDate, tns:simulatorTime
Source
 
<complexType name="AbioticThingCensus" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000309">
  <annotation>
    <documentation>A census of entities of a certain type or types in the abiotic ecosystem.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Census">
      <sequence>
        <element name="abioticThing" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:InfectiousDiseaseControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A plan specification whose objective specification is an infectious disease control objective specification.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Source
 
<complexType name="InfectiousDiseaseControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000086">
  <annotation>
    <documentation>A plan specification whose objective specification is an infectious disease control objective specification.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1"/>
        <element name="location" type="tns:Location" maxOccurs="1" minOccurs="0">
        </element>
        <element name="controlMeasureStartTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000208" type="tns:TriggerDefinition" maxOccurs="unbounded" minOccurs="1">
          <annotation>
            <documentation>An information content entity that specifies the start time of the implementation of a infectious disease control strategy.</documentation>
          </annotation>
        </element>
        <element name="controlMeasureStopTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000260" type="tns:TriggerDefinition" maxOccurs="unbounded" minOccurs="0">
          <annotation>
            <documentation>An information content entity that specifies the time at which an infectious disease control strategy ends.</documentation>
          </annotation>
        </element>
        <element name="controlMeasureResponseDelay" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000133" type="tns:Duration" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A measurement datum of the time interval from the decision to implement an infectious disease control strategy to the start of the control strategy expressed in number of time intervals.</documentation>
          </annotation>
        </element>
        <element name="controlMeasureStandDownDelay" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000263" type="tns:Duration" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A measurement datum of the time interval from the decision to cease an infectious disease control strategy to the time the control strategy ends expressed in number of time intervals.</documentation>
          </annotation>
        </element>
        <element name="logisticalSystems" type="tns:LogisticalSystem" maxOccurs="unbounded" minOccurs="0"/>
        <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
        <element name="templatedInfectiousDiseaseControlMeasureUrlsForSoftware" type="tns:TemplatedInfectiousDiseaseControlMeasureUrlForSoftware" minOccurs="0" maxOccurs="unbounded"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:TriggerDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A rule that specifies the event that, when it occurs, is the trigger to either start or stop an infectious disease control strategy.
Diagram
Diagram
Used by
Source
 
<complexType name="TriggerDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000261">
  <annotation>
    <documentation>A rule that specifies the event that, when it occurs, is the trigger to either start or stop an infectious disease control strategy.</documentation>
  </annotation>
</complexType>
[ top ]
Complex Type tns:LogisticalSystem
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LogisticalSystem_product apollo.tmp#LogisticalSystem_logisticalSystemNodes
Used by
Model
Children tns:logisticalSystemNodes, tns:product
Source
 
<complexType name="LogisticalSystem">
  <sequence>
    <element name="product" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="logisticalSystemNodes" type="tns:LogisticalSystemNode" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:LogisticalSystemNode
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LogisticalSystemNode_description apollo.tmp#LogisticalSystemNode_capacitySchedule apollo.tmp#LogisticalSystemNode_outputSchedule apollo.tmp#LogisticalSystemNode_children
Used by
Model
Children tns:capacitySchedule, tns:children, tns:description, tns:outputSchedule
Source
 
<complexType name="LogisticalSystemNode">
  <sequence>
    <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0">
    </element>
    <choice>
      <element name="capacitySchedule" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000212" type="tns:Schedule" minOccurs="1" maxOccurs="1">
        <annotation>
          <documentation>A plan specification that specifies the capacity to administer a particular treatment over a specific temporal interval in a specified geographical region.</documentation>
        </annotation>
      </element>
      <element name="outputSchedule" type="tns:Schedule" minOccurs="1" maxOccurs="1">
      </element>
    </choice>
    <element name="children" type="tns:LogisticalSystemNode" maxOccurs="unbounded" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:Schedule
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A plan specification that specifies 1) the quantity of which some material entity will be allocated to the eventual realization of some action specification, and 2) the temporal regions in which each action specification is to be realized.
Diagram
Diagram apollo.tmp#Schedule_unitOfMeasure apollo.tmp#Schedule_scheduleElements
Used by
Model
Children tns:scheduleElements, tns:unitOfMeasure
Source
 
<complexType name="Schedule" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000500">
  <annotation>
    <documentation>A plan specification that specifies 1) the quantity of which some material entity will be allocated to the eventual realization of some action specification, and 2) the temporal regions in which each action specification is to be realized.</documentation>
  </annotation>
  <sequence>
    <element name="unitOfMeasure" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="scheduleElements" type="tns:ScheduleElement" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ScheduleElement
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ScheduleElement_quantity apollo.tmp#ScheduleElement_dateTime
Used by
Model
Children tns:dateTime, tns:quantity
Source
 
<complexType name="ScheduleElement">
  <sequence>
    <element name="quantity" type="positiveInteger" maxOccurs="1" minOccurs="1">
    </element>
    <element name="dateTime" type="dateTime" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:TemplatedInfectiousDiseaseControlMeasureUrlForSoftware
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TemplatedInfectiousDiseaseControlMeasureUrlForSoftware_softwareIdentification apollo.tmp#TemplatedInfectiousDiseaseControlMeasureUrlForSoftware_controlMeasureTemplateUrl
Used by
Model
Children tns:controlMeasureTemplateUrl, tns:softwareIdentification
Source
 
<complexType name="TemplatedInfectiousDiseaseControlMeasureUrlForSoftware">
  <sequence>
    <element name="softwareIdentification" type="tns:SoftwareIdentification" minOccurs="1" maxOccurs="unbounded"/>
    <element name="controlMeasureTemplateUrl" type="anyURI" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:SoftwareIdentification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to a specific piece of software.
Diagram
Diagram apollo.tmp#SoftwareIdentification_softwareDeveloper apollo.tmp#SoftwareIdentification_softwareName apollo.tmp#SoftwareIdentification_softwareVersion apollo.tmp#SoftwareIdentification_softwareType apollo.tmp#SoftwareIdentification_softwareLicenseIdentification apollo.tmp#SoftwareIdentification_customIdentifier
Used by
Model
Children tns:customIdentifier, tns:softwareDeveloper, tns:softwareLicenseIdentification, tns:softwareName, tns:softwareType, tns:softwareVersion
Source
 
<complexType name="SoftwareIdentification" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000106">
  <annotation>
    <documentation>An identifier that refers to a specific piece of software.</documentation>
  </annotation>
  <sequence>
    <element name="softwareDeveloper" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000105" type="token" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An identifier that refers to the legal person that creates and maintains software.</documentation>
      </annotation>
    </element>
    <element name="softwareName" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000109" type="token" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An identifier that refers to all version of a specific software.</documentation>
      </annotation>
    </element>
    <element name="softwareVersion" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000108" type="token" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An identifier that, as part of a complete software identifier, refers to one specific version of the software.</documentation>
      </annotation>
    </element>
    <element name="softwareType" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000591" type="tns:ApolloSoftwareTypeEnum" maxOccurs="1" minOccurs="1"/>
    <element name="softwareLicenseIdentification" type="tns:SoftwareLicenseIdentification" minOccurs="0"/>
    <element name="customIdentifier" type="token" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:ApolloSoftwareTypeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration simulator
enumeration batchSimulator
enumeration visualizer
enumeration syntheticPopulationGenerator
enumeration translator
enumeration data
enumeration broker
enumeration endUserApplication
enumeration runManager
enumeration queryService
Used by
Source
 
<simpleType name="ApolloSoftwareTypeEnum">
  <restriction base="string">
    <enumeration value="simulator"/>
    <enumeration value="batchSimulator"/>
    <enumeration value="visualizer"/>
    <enumeration value="syntheticPopulationGenerator"/>
    <enumeration value="translator"/>
    <enumeration value="data"/>
    <enumeration value="broker"/>
    <enumeration value="endUserApplication"/>
    <enumeration value="runManager"/>
    <enumeration value="queryService"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:SoftwareLicenseIdentification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to a specific software license.
Diagram
Diagram apollo.tmp#SoftwareLicenseIdentification_licenseLocation apollo.tmp#SoftwareLicenseIdentification_licenseVersion apollo.tmp#SoftwareLicenseIdentification_licenseName apollo.tmp#SoftwareLicenseIdentification_attributionNotice
Used by
Model
Children tns:attributionNotice, tns:licenseLocation, tns:licenseName, tns:licenseVersion
Source
 
<complexType name="SoftwareLicenseIdentification" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000536">
  <annotation>
    <documentation>An identifier that refers to a specific software license.</documentation>
  </annotation>
  <sequence>
    <element name="licenseLocation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000539" type="anyURI">
      <annotation>
        <documentation>A unique resource locator that constitutes a reference to some software license.</documentation>
      </annotation>
    </element>
    <element name="licenseVersion" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000537" type="token">
      <annotation>
        <documentation>An identifier that, as part of a complete software license identifier, refers to one specific version of the software license.</documentation>
      </annotation>
    </element>
    <element name="licenseName" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000538" type="token">
      <annotation>
        <documentation>An identifier that refers to all versions of a specific software license.</documentation>
      </annotation>
    </element>
    <element name="attributionNotice" type="string"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ScenarioCartesianOrigin
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ScenarioCartesianOrigin_cartesianReferenceLongitude apollo.tmp#ScenarioCartesianOrigin_cartesianReferenceLatitude apollo.tmp#ScenarioCartesianOrigin_cartesianReferenceAltitude
Used by
Model
Children tns:cartesianReferenceAltitude, tns:cartesianReferenceLatitude, tns:cartesianReferenceLongitude
Source
 
<complexType name="ScenarioCartesianOrigin">
  <sequence>
    <element name="cartesianReferenceLongitude" type="tns:Longitude" maxOccurs="1" minOccurs="1"/>
    <element name="cartesianReferenceLatitude" type="tns:Latitude" maxOccurs="1" minOccurs="1"/>
    <element name="cartesianReferenceAltitude" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:Longitude
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of double
Facets
maxInclusive 180
minInclusive -180
Used by
Source
 
<simpleType name="Longitude" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001621">
  <restriction base="double">
    <minInclusive value="-180"/>
    <maxInclusive value="180"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:Latitude
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of double
Facets
maxInclusive 90
minInclusive -90
Used by
Source
 
<simpleType name="Latitude" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001620">
  <restriction base="double">
    <minInclusive value="-90"/>
    <maxInclusive value="90"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:NonApolloParameter
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NonApolloParameter_description apollo.tmp#NonApolloParameter_parameterName apollo.tmp#NonApolloParameter_parameterIntValue apollo.tmp#NonApolloParameter_parameterFloatValue apollo.tmp#NonApolloParameter_parameterTokenValue
Used by
Model
Children tns:description, tns:parameterFloatValue, tns:parameterIntValue, tns:parameterName, tns:parameterTokenValue
Source
 
<complexType name="NonApolloParameter">
  <sequence>
    <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>A textual entity that specifies characteristics of some entity.</documentation>
      </annotation>
    </element>
    <element name="parameterName" type="string" maxOccurs="1" minOccurs="1">
    </element>
    <choice>
      <element name="parameterIntValue" type="int" maxOccurs="1" minOccurs="1"/>
      <element name="parameterFloatValue" type="double" maxOccurs="1" minOccurs="1"/>
      <element name="parameterTokenValue" type="token" maxOccurs="1" minOccurs="1"/>
    </choice>
  </sequence>
</complexType>
[ top ]
Simple Type tns:PositiveDouble
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of double
Facets
minExclusive 0
Used by
Source
 
<simpleType name="PositiveDouble">
  <restriction base="double">
    <minExclusive value="0"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:Percent
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A dimensionless unit which denotes an amount or magnitude of one quantity relative to another.
Diagram
Diagram
Type restriction of nonNegativeInteger
Facets
minInclusive 0
Used by
Source
 
<simpleType name="Percent" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000190">
  <annotation>
    <documentation>A dimensionless unit which denotes an amount or magnitude of one quantity relative to another.</documentation>
  </annotation>
  <restriction base="nonNegativeInteger">
    <minInclusive value="0"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:VariableCategoryValueTree
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VariableCategoryValueTree_nVariables apollo.tmp#VariableCategoryValueTree_rootVariableNode
Used by
Model
Children tns:nVariables, tns:rootVariableNode
Source
 
<complexType name="VariableCategoryValueTree">
  <sequence>
    <element name="nVariables" type="positiveInteger" maxOccurs="1" minOccurs="0">
    </element>
    <element name="rootVariableNode" type="tns:CategoricalVariableNode" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:UncertainDuration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A duration that is specified as a probability distribution over a range of numbers.
Diagram
Diagram apollo.tmp#ParameterValue apollo.tmp#Duration_unitOfTime apollo.tmp#Duration_referenceId apollo.tmp#Duration apollo.tmp#UncertainDuration_uncertainValue
Type extension of tns:Duration
Type hierarchy
Model
Children tns:referenceId, tns:uncertainValue, tns:unitOfTime
Source
 
<complexType name="UncertainDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000379">
  <annotation>
    <documentation>A duration that is specified as a probability distribution over a range of numbers.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Duration">
      <sequence>
        <element name="uncertainValue" type="tns:UncertainValue" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:NonparametricProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution
Type extension of tns:UnconditionalProbabilityDistribution
Type hierarchy
Used by
Model
Children tns:referenceId
Source
 
<complexType name="NonparametricProbabilityDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000249">
  <complexContent>
    <extension base="tns:UnconditionalProbabilityDistribution"/>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ParametricProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution
Type extension of tns:UnconditionalProbabilityDistribution
Type hierarchy
Used by
Model
Children tns:referenceId
Source
 
<complexType name="ParametricProbabilityDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000248">
  <complexContent>
    <extension base="tns:UnconditionalProbabilityDistribution"/>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DiscreteParametricProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#ParametricProbabilityDistribution
Type extension of tns:ParametricProbabilityDistribution
Type hierarchy
Model
Children tns:referenceId
Source
 
<complexType name="DiscreteParametricProbabilityDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000250">
  <complexContent>
    <extension base="tns:ParametricProbabilityDistribution"/>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DiscreteNonparametricProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#NonparametricProbabilityDistribution apollo.tmp#DiscreteNonparametricProbabilityDistribution_probabilityValuePairs
Type extension of tns:NonparametricProbabilityDistribution
Type hierarchy
Model
Children tns:probabilityValuePairs, tns:referenceId
Source
 
<complexType name="DiscreteNonparametricProbabilityDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000252">
  <complexContent>
    <extension base="tns:NonparametricProbabilityDistribution">
      <sequence>
        <element name="probabilityValuePairs" type="tns:ProbabilityValuePair" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ProbabilityValuePair
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ProbabilityValuePair_value apollo.tmp#ProbabilityValuePair_probability
Used by
Model
Children tns:probability, tns:value
Source
 
<complexType name="ProbabilityValuePair">
  <sequence>
    <element name="value" type="double" maxOccurs="1" minOccurs="1"/>
    <element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ContinuousParametricProbabilityDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#ParametricProbabilityDistribution
Type extension of tns:ParametricProbabilityDistribution
Type hierarchy
Used by
Model
Children tns:referenceId
Source
 
<complexType name="ContinuousParametricProbabilityDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000251">
  <complexContent>
    <extension base="tns:ParametricProbabilityDistribution"/>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:LogNormalDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#ParametricProbabilityDistribution apollo.tmp#ContinuousParametricProbabilityDistribution apollo.tmp#LogNormalDistribution_mean apollo.tmp#LogNormalDistribution_standardDeviation apollo.tmp#LogNormalDistribution_shiftRight apollo.tmp#LogNormalDistribution_cutTailAt
Type extension of tns:ContinuousParametricProbabilityDistribution
Type hierarchy
Model
Children tns:cutTailAt, tns:mean, tns:referenceId, tns:shiftRight, tns:standardDeviation
Source
 
<complexType name="LogNormalDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000079">
  <complexContent>
    <extension base="tns:ContinuousParametricProbabilityDistribution">
      <sequence>
        <element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A data item that is produced as the output of an averaging data transformation and represents the average value of the input data.</documentation>
          </annotation>
        </element>
        <element name="standardDeviation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000448" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A data item that specifies the dispersion of values around some parameter in a set of data, and whose values are standardized to express the same unit of measure as the parameter of interest.</documentation>
          </annotation>
        </element>
        <element name="shiftRight" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0"/>
        <element name="cutTailAt" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000481" type="tns:PositiveDouble" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An action specification that delineates some minimum value or maximum value for some test statistic within a continuous probability distribution that is meant to serve as a lower bound or upper bound, respectively, for some population or sample of interest.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:NormalDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A continuous parametric probability distribution that is uniform; centered around the mean, parameter μ​; and whose spread of standard deviations, parameter σ​, adheres to the empirical rule.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#ParametricProbabilityDistribution apollo.tmp#ContinuousParametricProbabilityDistribution apollo.tmp#NormalDistribution_mean apollo.tmp#NormalDistribution_standardDeviation apollo.tmp#NormalDistribution_shiftRight apollo.tmp#NormalDistribution_cutTailAt
Type extension of tns:ContinuousParametricProbabilityDistribution
Type hierarchy
Model
Children tns:cutTailAt, tns:mean, tns:referenceId, tns:shiftRight, tns:standardDeviation
Source
 
<complexType name="NormalDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000036">
  <annotation>
    <documentation>A continuous parametric probability distribution that is uniform; centered around the mean, parameter μ​; and whose spread of standard deviations, parameter σ​, adheres to the empirical rule.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ContinuousParametricProbabilityDistribution">
      <sequence>
        <element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="1"/>
        <element name="standardDeviation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000448" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
        <element name="shiftRight" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0"/>
        <element name="cutTailAt" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000481" type="tns:PositiveDouble" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:GammaDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
the gamma distribution is a two-parameter family of continuous probability distributions
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#ParametricProbabilityDistribution apollo.tmp#ContinuousParametricProbabilityDistribution apollo.tmp#GammaDistribution_k-shape apollo.tmp#GammaDistribution_theta-scale apollo.tmp#GammaDistribution_shiftRight apollo.tmp#GammaDistribution_cutTailAt
Type extension of tns:ContinuousParametricProbabilityDistribution
Type hierarchy
Model
Children tns:cutTailAt, tns:k-shape, tns:referenceId, tns:shiftRight, tns:theta-scale
Source
 
<complexType name="GammaDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000255">
  <annotation>
    <documentation>the gamma distribution is a two-parameter family of continuous probability distributions</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ContinuousParametricProbabilityDistribution">
      <sequence>
        <element name="k-shape" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
        <element name="theta-scale" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
        <element name="shiftRight" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
        <element name="cutTailAt" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000481" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:WeibullDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The Weibull distribution gives the distribution of lifetimes of objects. It was originally proposed to quantify fatigue data, but it is also used in analysis of systems involving a "weakest link."
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#ParametricProbabilityDistribution apollo.tmp#ContinuousParametricProbabilityDistribution apollo.tmp#WeibullDistribution_k-shape apollo.tmp#WeibullDistribution_lambda-scale apollo.tmp#WeibullDistribution_shiftRight apollo.tmp#WeibullDistribution_cutTailAt
Type extension of tns:ContinuousParametricProbabilityDistribution
Type hierarchy
Model
Children tns:cutTailAt, tns:k-shape, tns:lambda-scale, tns:referenceId, tns:shiftRight
Source
 
<complexType name="WeibullDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000256">
  <annotation>
    <documentation>The Weibull distribution gives the distribution of lifetimes of objects. It was originally proposed to quantify fatigue data, but it is also used in analysis of systems involving a "weakest link."</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ContinuousParametricProbabilityDistribution">
      <sequence>
        <element name="k-shape" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
        <element name="lambda-scale" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
        <element name="shiftRight" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
        <element name="cutTailAt" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000481" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ContinuousUniformDistribution
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
the continuous uniform distribution or rectangular distribution is a family of symmetric probability distributions such that for each member of the family, all intervals of the same length on the distribution's support are equally probable.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#UnconditionalProbabilityDistribution apollo.tmp#ParametricProbabilityDistribution apollo.tmp#ContinuousParametricProbabilityDistribution apollo.tmp#ContinuousUniformDistribution_minimumValue apollo.tmp#ContinuousUniformDistribution_maximumValue
Type extension of tns:ContinuousParametricProbabilityDistribution
Type hierarchy
Model
Children tns:maximumValue, tns:minimumValue, tns:referenceId
Source
 
<complexType name="ContinuousUniformDistribution" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000257">
  <annotation>
    <documentation>the continuous uniform distribution or rectangular distribution is a family of symmetric probability distributions such that for each member of the family, all intervals of the same length on the distribution's support are equally probable.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ContinuousParametricProbabilityDistribution">
      <sequence>
        <element name="minimumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000432" type="double" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A data item that specifies the smallest numerical value in a data set of scalar measurement data items.</documentation>
          </annotation>
        </element>
        <element name="maximumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000433" type="double" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A data item that specifies the largest numerical value in a data set of scalar measurement data itmes.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:MeanWithConfidenceInterval
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data structure that specifies both the sample mean and the confidence interval generated by the measurement process.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#MeanWithConfidenceInterval_mean apollo.tmp#MeanWithConfidenceInterval_lowerBound apollo.tmp#MeanWithConfidenceInterval_upperBound apollo.tmp#MeanWithConfidenceInterval_confidence apollo.tmp#MeanWithConfidenceInterval_sampleSize
Type extension of tns:UncertainValue
Type hierarchy
Model
Children tns:confidence, tns:lowerBound, tns:mean, tns:sampleSize, tns:upperBound
Source
 
<complexType name="MeanWithConfidenceInterval" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000424">
  <annotation>
    <documentation>A data structure that specifies both the sample mean and the confidence interval generated by the measurement process.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:UncertainValue">
      <sequence>
        <element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="1"/>
        <element name="lowerBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000436" type="double" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An information content entity that delimits an interval data structure based on some value that is less than or equal to all other values within that data structure.</documentation>
          </annotation>
        </element>
        <element name="upperBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000447" type="double" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An information content entity that delimits an interval data structure based on some value that is greater than or equal to all other values within that data structure.</documentation>
          </annotation>
        </element>
        <element name="confidence" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000434" type="tns:Percent" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A predicted data item that estimates how reliable some method of statistical inference will be at estimating the population parameter of interest.</documentation>
          </annotation>
        </element>
        <element name="sampleSize" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000088" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>statistical sample size is a count evaluating the number of individual experimental units</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:MeanWithStandardDeviation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data structure that specifies both the sample mean and the standard deviation generated by the measurement process.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#MeanWithStandardDeviation_mean apollo.tmp#MeanWithStandardDeviation_standardDeviation apollo.tmp#MeanWithStandardDeviation_sampleSize
Type extension of tns:UncertainValue
Type hierarchy
Model
Children tns:mean, tns:sampleSize, tns:standardDeviation
Source
 
<complexType name="MeanWithStandardDeviation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000425">
  <annotation>
    <documentation>A data structure that specifies both the sample mean and the standard deviation generated by the measurement process.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:UncertainValue">
      <sequence>
        <element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="1"/>
        <element name="standardDeviation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000448" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
        <element name="sampleSize" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000088" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:MeanMedianMinimumMaximum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data structure that holds the mean, median, minimum value, and maximum value of one set of measurement data.
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#MeanMedianMinimumMaximum_mean apollo.tmp#MeanMedianMinimumMaximum_median apollo.tmp#MeanMedianMinimumMaximum_minimumValue apollo.tmp#MeanMedianMinimumMaximum_maximumValue apollo.tmp#MeanMedianMinimumMaximum_sampleSize
Type extension of tns:UncertainValue
Type hierarchy
Model
Children tns:maximumValue, tns:mean, tns:median, tns:minimumValue, tns:sampleSize
Source
 
<complexType name="MeanMedianMinimumMaximum" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000462">
  <annotation>
    <documentation>A data structure that holds the mean, median, minimum value, and maximum value of one set of measurement data.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:UncertainValue">
      <sequence>
        <element name="mean" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000679" type="double" maxOccurs="1" minOccurs="0"/>
        <element name="median" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0000674" type="double" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A data item that is produced as the output of a center calculation data transformation and represents the center value of the input data.</documentation>
          </annotation>
        </element>
        <element name="minimumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000432" type="double" maxOccurs="1" minOccurs="1"/>
        <element name="maximumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000433" type="double" maxOccurs="1" minOccurs="1"/>
        <element name="sampleSize" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000088" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:vaccineOntologyId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that refers to a type of vaccine, i.e., one of a class of manufactured vaccines that public health would consider interchangable.
Diagram
Diagram
Type restriction of token
Facets
pattern [A-Z_0-9]{2,17}
Used by
Source
 
<simpleType name="vaccineOntologyId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000117">
  <annotation>
    <documentation>An identifier that refers to a type of vaccine, i.e., one of a class of manufactured vaccines that public health would consider interchangable.</documentation>
  </annotation>
  <restriction base="token">
    <pattern value="[A-Z_0-9]{2,17}"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:RxNormId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by the National Library of Medicine as a unique string of integer numerals to be used as a standard way of denoting each concept in the RxNorm terminology.
Diagram
Diagram
Type restriction of token
Facets
pattern [0-9]
Source
 
<simpleType name="RxNormId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000492">
  <annotation>
    <documentation>An identifier curated by the National Library of Medicine as a unique string of integer numerals to be used as a standard way of denoting each concept in the RxNorm terminology.</documentation>
  </annotation>
  <restriction base="token">
    <pattern value="[0-9]"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:LoincId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier curated by the Regenstrief Institute to be used as a standard way of denoting each term in the LOINC database.
Diagram
Diagram
Type restriction of string
Facets
pattern [0-9]{5}-[0-9]{1}
Used by
Source
 
<simpleType name="LoincId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000493">
  <annotation>
    <documentation>An identifier curated by the Regenstrief Institute to be used as a standard way of denoting each term in the LOINC database.</documentation>
  </annotation>
  <restriction base="string">
    <pattern value="[0-9]{5}-[0-9]{1}"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:MosquitoReproduction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A multicellular organism reproduction that has as its agent a mosquito (taxon Culicidae, ID 7157)
Diagram
Diagram apollo.tmp#Reproduction apollo.tmp#MosquitoReproduction_gonotrophicPeriodDuration apollo.tmp#MosquitoReproduction_eggsPerBrood apollo.tmp#MosquitoReproduction_minimumEggsPerOviposition apollo.tmp#MosquitoReproduction_ageDependentFecundityReduction
Type extension of tns:Reproduction
Type hierarchy
Model
Children tns:ageDependentFecundityReduction, tns:eggsPerBrood, tns:gonotrophicPeriodDuration, tns:minimumEggsPerOviposition
Source
 
<complexType name="MosquitoReproduction" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000312">
  <annotation>
    <documentation>A multicellular organism reproduction that has as its agent a mosquito (taxon Culicidae, ID 7157)</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Reproduction">
      <sequence>
        <element name="gonotrophicPeriodDuration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000313" type="tns:Duration" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A time measurement datum of the length of the temporal interval occupied by a gonotropic period.</documentation>
          </annotation>
        </element>
        <element name="eggsPerBrood" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000453" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An average value that specifies the number of eggs produced during one reproductive cycle for each individual female within a population.</documentation>
          </annotation>
        </element>
        <element name="minimumEggsPerOviposition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000471" type="positiveInteger" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An epidemic simulator action specification that specifies the minimum number of eggs that any simulated female mosquito will oviposit during a gonotrophic cycle.</documentation>
          </annotation>
        </element>
        <element name="ageDependentFecundityReduction" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000472" type="tns:Rate" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A rate measurement datum that measures the percentage decrease per unit time (typically per day) in the number of offspring to which a female mosquito passes an infection with a particular pathogen (e.g., Wolbachia).</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ClaraDensityDependentMortalityFunction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#MortalityFunction apollo.tmp#ClaraDensityDependentMortalityFunction_description apollo.tmp#ClaraDensityDependentMortalityFunction_omega apollo.tmp#ClaraDensityDependentMortalityFunction_sigma
Type extension of tns:MortalityFunction
Type hierarchy
Model
Children tns:description, tns:omega, tns:sigma
Source
 
<complexType name="ClaraDensityDependentMortalityFunction">
  <complexContent>
    <extension base="tns:MortalityFunction">
      <sequence>
        <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0"/>
        <element name="omega" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
        <element name="sigma" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:MosquitoBehavior
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An individual behavior of a mosquito (organism of family Culicidae).
Diagram
Diagram apollo.tmp#Behavior apollo.tmp#MosquitoBehavior_biteProbability apollo.tmp#MosquitoBehavior_biteRadius apollo.tmp#MosquitoBehavior_timeBetweenBites apollo.tmp#MosquitoBehavior_migrationSpeed apollo.tmp#MosquitoBehavior_shadeAffinity apollo.tmp#MosquitoBehavior_maleMatingRadius apollo.tmp#MosquitoBehavior_matingProbability apollo.tmp#MosquitoBehavior_straightTravelAfterOviposit
Type extension of tns:Behavior
Type hierarchy
Model
Children tns:biteProbability, tns:biteRadius, tns:maleMatingRadius, tns:matingProbability, tns:migrationSpeed, tns:shadeAffinity, tns:straightTravelAfterOviposit, tns:timeBetweenBites
Source
 
<complexType name="MosquitoBehavior" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000401">
  <annotation>
    <documentation>An individual behavior of a mosquito (organism of family Culicidae).</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Behavior">
      <sequence>
        <element name="biteProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000457" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A predicted data item that specifies the frequency with which a female mosquito feeds on or probes the host given an interaction between the mosquito and the host that brings them within a certain proximity (the bite radius).</documentation>
          </annotation>
        </element>
        <element name="biteRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000440" type="tns:Distance" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A length measurement datum that specifies the radius of a circle, which is centered at a vector organism, for which there is a certain probability that the vector organism will bite a susceptible host.</documentation>
          </annotation>
        </element>
        <element name="timeBetweenBites" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000441" type="tns:Duration" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A duration that measures the temporal interval between some vector bite n and some vector bite n+1.</documentation>
          </annotation>
        </element>
        <element name="migrationSpeed" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000442" type="tns:Rate" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A rate measurement datum of that divides the total distance traveled during some migration process by the duration of the temporal interval occupied by that process.</documentation>
          </annotation>
        </element>
        <element name="shadeAffinity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000443" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An information content entity that specifies the probability that a given mosquito will realize a disposition to seek out a shaded environment when it isn't seeking a host or ovisite.</documentation>
          </annotation>
        </element>
        <element name="maleMatingRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000458" type="tns:Distance" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A length measurement datum that specifies the radius of a circle, which is centered at a male vector organism, for which there is some probability that it will mate with a female mosquito.</documentation>
          </annotation>
        </element>
        <element name="matingProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000450" type="tns:Probability" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An information content entity that specifies the probability that some male mosquito and some female mosquito within a certain distance of each other realize some disposition to reproduce with one another.</documentation>
          </annotation>
        </element>
        <element name="straightTravelAfterOviposit" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000452" type="tns:Distance" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An epidemic simulator action specification that specifies the linear distance a female mosquito will travel to find the next oviposition site after depositing some of its eggs at the previous one.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:HumanBehavior
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An individual behavior of a human being.
Diagram
Diagram apollo.tmp#Behavior apollo.tmp#HumanBehavior_speedOfMovement apollo.tmp#HumanBehavior_buildingAffinity
Type extension of tns:Behavior
Type hierarchy
Model
Children tns:buildingAffinity, tns:speedOfMovement
Source
 
<complexType name="HumanBehavior" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000402">
  <annotation>
    <documentation>An individual behavior of a human being.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Behavior">
      <sequence>
        <element name="speedOfMovement" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000444" type="tns:Rate" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A rate measurement datum that specifies the ratio of distance travelled during a movement process to the duration of the time interval occupied by the process.</documentation>
          </annotation>
        </element>
        <element name="buildingAffinity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000451" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An information content entity that specifies the probability that a given mosquito realizes some disposition to seek out a building if it isn't seeking a host or ovisite.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:lInfection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Infection_pathogen apollo.tmp#Infection_host apollo.tmp#Infection_infectiousDiseases apollo.tmp#Infection_infectionAcquisitionsFromInfectedHosts apollo.tmp#Infection_infectionAcquisitionsFromContaminatedThings apollo.tmp#Infection_InfectionAcquisitionsFromColonizedHosts apollo.tmp#Infection apollo.tmp#lInfection_location apollo.tmp#lInfection_timePeriod
Type extension of tns:Infection
Type hierarchy
Model
Children tns:InfectionAcquisitionsFromColonizedHosts, tns:host, tns:infectionAcquisitionsFromContaminatedThings, tns:infectionAcquisitionsFromInfectedHosts, tns:infectiousDiseases, tns:location, tns:pathogen, tns:timePeriod
Source
 
<complexType name="lInfection">
  <complexContent>
    <extension base="tns:Infection">
      <sequence>
        <element name="location" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
        <element name="timePeriod" type="tns:Interval" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:lInfectiousDisease
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDisease_disease apollo.tmp#InfectiousDisease_speciesWithDisease apollo.tmp#InfectiousDisease_causalPathogen apollo.tmp#InfectiousDisease_incubationPeriod apollo.tmp#InfectiousDisease_prodromalPeriod apollo.tmp#InfectiousDisease_fulminantPeriod apollo.tmp#InfectiousDisease_otherIntervals apollo.tmp#InfectiousDisease_diseaseOutcomesWithProbabilities apollo.tmp#InfectiousDisease apollo.tmp#lInfectiousDisease_coosalPathogen apollo.tmp#lInfectiousDisease_hoostSpecies
Type extension of tns:InfectiousDisease
Type hierarchy
Model
Children tns:causalPathogen, tns:coosalPathogen, tns:disease, tns:diseaseOutcomesWithProbabilities, tns:fulminantPeriod, tns:hoostSpecies, tns:incubationPeriod, tns:otherIntervals, tns:prodromalPeriod, tns:speciesWithDisease
Source
 
<complexType name="lInfectiousDisease">
  <complexContent>
    <extension base="tns:InfectiousDisease">
      <sequence>
        <element name="coosalPathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
        <element name="hoostSpecies" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:lContamination
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Contamination_pathogen apollo.tmp#Contamination_abioticThing apollo.tmp#Contamination_contaminationDuration apollo.tmp#Contamination_contaminationAcquisition apollo.tmp#Contamination apollo.tmp#lContamination_XXX
Type extension of tns:Contamination
Type hierarchy
Model
Children tns:XXX, tns:abioticThing, tns:contaminationAcquisition, tns:contaminationDuration, tns:pathogen
Source
 
<complexType name="lContamination">
  <complexContent>
    <extension base="tns:Contamination">
      <sequence>
        <element name="XXX" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:InfectiousDiseaseStageEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration susceptible
enumeration incubating
enumeration symptomatic
Source
 
<simpleType name="InfectiousDiseaseStageEnum">
  <restriction base="string">
    <enumeration value="susceptible"/>
    <enumeration value="incubating"/>
    <enumeration value="symptomatic"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:AnthraxDiseaseStageVariableValuesEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration susceptible
enumeration incubating
enumeration symptomaticNotFulminant
enumeration fulminant
enumeration recoveredAndImmune
enumeration dead
Source
 
<simpleType name="AnthraxDiseaseStageVariableValuesEnum">
  <restriction base="string">
    <enumeration value="susceptible"/>
    <enumeration value="incubating"/>
    <enumeration value="symptomaticNotFulminant"/>
    <enumeration value="fulminant"/>
    <enumeration value="recoveredAndImmune"/>
    <enumeration value="dead"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:PopulationTreatmentCensusData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CensusData_date apollo.tmp#CensusData_location apollo.tmp#CensusData apollo.tmp#PopulationTreatmentCensusData_treatmentCensusDataCells apollo.tmp#PopulationTreatmentCensusData_exceptionSubpopulations
Type extension of tns:CensusData
Type hierarchy
Used by
Model
Children tns:date, tns:exceptionSubpopulations, tns:location, tns:treatmentCensusDataCells
Source
 
<complexType name="PopulationTreatmentCensusData">
  <complexContent>
    <extension base="tns:CensusData">
      <sequence>
        <element name="treatmentCensusDataCells" type="tns:PopulationTreatmentCensusDataCell" maxOccurs="unbounded" minOccurs="1">
        </element>
        <element name="exceptionSubpopulations" type="tns:PopulationTreatmentCensusData" maxOccurs="unbounded" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:PopulationTreatmentCensusDataCell
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PopulationTreatmentCensusDataCell_ageRange apollo.tmp#PopulationTreatmentCensusDataCell_sex apollo.tmp#PopulationTreatmentCensusDataCell_treatmentState apollo.tmp#PopulationTreatmentCensusDataCell_fractionInTreatmentState
Used by
Model
Children tns:ageRange, tns:fractionInTreatmentState, tns:sex, tns:treatmentState
Source
 
<complexType name="PopulationTreatmentCensusDataCell">
  <sequence>
    <element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0">
    </element>
    <element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="0">
    </element>
    <element name="treatmentState" type="tns:TreatmentStateEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="fractionInTreatmentState" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:TreatmentStateEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration treated
enumeration not_treated
Used by
Source
 
<simpleType name="TreatmentStateEnum">
  <restriction base="string">
    <enumeration value="treated"/>
    <enumeration value="not_treated"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:PopulationTreatmentCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A census about a particular medical treatment of a population.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#PopulationTreatmentCensus_populationSpecies apollo.tmp#PopulationTreatmentCensus_treatmentCensusData
Type extension of tns:Census
Type hierarchy
Used by
Model
Children tns:description, tns:location, tns:populationSpecies, tns:referenceDate, tns:simulatorTime, tns:treatmentCensusData
Source
 
<complexType name="PopulationTreatmentCensus" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000187">
  <annotation>
    <documentation>A census about a particular medical treatment of a population.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Census">
      <sequence>
        <element name="populationSpecies" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000491" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A taxonomy identifier curated by the National Center for Biotechnology Information that specifies the taxonomic classification of some population of organisms.</documentation>
          </annotation>
        </element>
        <element name="treatmentCensusData" type="tns:PopulationTreatmentCensusData" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:OvipositionSiteCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An abiotic ecosystem census of the locations where pregnant female mosquitos lay their eggs.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Census_description apollo.tmp#Census_location apollo.tmp#Census_simulatorTime apollo.tmp#Census_referenceDate apollo.tmp#Census apollo.tmp#AbioticThingCensus_abioticThing apollo.tmp#AbioticThingCensus apollo.tmp#OvipositionSiteCensus_breteauIndex apollo.tmp#OvipositionSiteCensus_carryingCapacityPerHouse apollo.tmp#OvipositionSiteCensus_heterogenousCarryingCapacity apollo.tmp#OvipositionSiteCensus_ratioOfOutdoorToIndoorOvisites apollo.tmp#OvipositionSiteCensus_maximumRatioOfOutdoorCarryingCapacityToIndoor
Type extension of tns:AbioticThingCensus
Type hierarchy
Model
Children tns:abioticThing, tns:breteauIndex, tns:carryingCapacityPerHouse, tns:description, tns:heterogenousCarryingCapacity, tns:location, tns:maximumRatioOfOutdoorCarryingCapacityToIndoor, tns:ratioOfOutdoorToIndoorOvisites, tns:referenceDate, tns:simulatorTime
Source
 
<complexType name="OvipositionSiteCensus" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000315">
  <annotation>
    <documentation>An abiotic ecosystem census of the locations where pregnant female mosquitos lay their eggs.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:AbioticThingCensus">
      <sequence>
        <element name="breteauIndex" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000311" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>The average number of water containers testing positive for the presence of a particular mosquito species, typically Aedes aegyptii, per 100 households in the geographical region under surveillance.</documentation>
          </annotation>
        </element>
        <element name="carryingCapacityPerHouse" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000473" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An epidemic simulator action specification that specifies the maximum number of larvae that can exist across all ovisites in a given house.</documentation>
          </annotation>
        </element>
        <element name="heterogenousCarryingCapacity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000463" type="boolean" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A conditional specification for some epidemic simulator that is triggered by a Boolean value that, if true, specifies that there is a non-uniform distribution of oviposition site carrying capacities in a simulated vector population.</documentation>
          </annotation>
        </element>
        <element name="ratioOfOutdoorToIndoorOvisites" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000446" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A data item that specifies, as a ratio, the total count of oviposition sites located externally to all places in a geographic region relative to the total count of oviposition sites located internally to some place in that geographic region.</documentation>
          </annotation>
        </element>
        <element name="maximumRatioOfOutdoorCarryingCapacityToIndoor" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:TemporalTriggerDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infectious disease control trigger definition that is based on the passage of a specified interval of time.
Diagram
Diagram apollo.tmp#TriggerDefinition apollo.tmp#TemporalTriggerDefinition_timeScale apollo.tmp#TemporalTriggerDefinition_timeSinceTimeScaleZero
Type extension of tns:TriggerDefinition
Type hierarchy
Model
Children tns:timeScale, tns:timeSinceTimeScaleZero
Source
 
<complexType name="TemporalTriggerDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000271">
  <annotation>
    <documentation>An infectious disease control trigger definition that is based on the passage of a specified interval of time.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:TriggerDefinition">
      <sequence>
        <element name="timeScale" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000268" type="tns:TimeScaleEnum" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An identifier that designates a scale according to which time is measured (e.g., Gregorian Calendar).</documentation>
          </annotation>
        </element>
        <element name="timeSinceTimeScaleZero" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000272" type="tns:FixedDuration" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>the duration of time that has elapsed from the zero reference point to a later time on the time scale</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:TimeScaleEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration simulatorTimeScale
enumeration decisionTimeScale
enumeration controlMeasureTimeScale
enumeration individualTreatmentTimeScale
enumeration epidemicTimeScale
enumeration gregorianCalendar
Used by
Source
 
<simpleType name="TimeScaleEnum">
  <restriction base="string">
    <enumeration value="simulatorTimeScale"/>
    <enumeration value="decisionTimeScale"/>
    <enumeration value="controlMeasureTimeScale"/>
    <enumeration value="individualTreatmentTimeScale"/>
    <enumeration value="epidemicTimeScale"/>
    <enumeration value="gregorianCalendar"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:DiseaseSurveillanceTriggerDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infectious disease control trigger definition for a reactive control measure based on the outcome of disease surveillance.
Diagram
Diagram apollo.tmp#TriggerDefinition apollo.tmp#DiseaseSurveillanceTriggerDefinition_reactiveControlMeasureTest apollo.tmp#DiseaseSurveillanceTriggerDefinition_reactiveControlMeasureThreshold apollo.tmp#DiseaseSurveillanceTriggerDefinition_unitOfMeasureForThreshold apollo.tmp#DiseaseSurveillanceTriggerDefinition_reactiveControlMeasureOperator apollo.tmp#DiseaseSurveillanceTriggerDefinition_diseaseSurveillanceCapability
Type extension of tns:TriggerDefinition
Type hierarchy
Model
Children tns:diseaseSurveillanceCapability, tns:reactiveControlMeasureOperator, tns:reactiveControlMeasureTest, tns:reactiveControlMeasureThreshold, tns:unitOfMeasureForThreshold
Source
 
<complexType name="DiseaseSurveillanceTriggerDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000269">
  <annotation>
    <documentation>An infectious disease control trigger definition for a reactive control measure based on the outcome of disease surveillance.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:TriggerDefinition">
      <sequence>
        <element name="reactiveControlMeasureTest" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000130" type="token" maxOccurs="1" minOccurs="1">
        </element>
        <element name="reactiveControlMeasureThreshold" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000131" type="int" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A data item that specifies the fraction of the population known to have undergone a specific event that results in starting or stopping an infectious disease control strategy.</documentation>
          </annotation>
        </element>
        <element name="unitOfMeasureForThreshold" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000295" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A unit of measure for a threshold in a reactive infectious disease control strategy.</documentation>
          </annotation>
        </element>
        <element name="reactiveControlMeasureOperator" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000474" type="tns:OperatorEnum" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An epidemic simulator action specification that specifies the comparison operation to use to determine whether some value, relative to a threshold, is one that should trigger the implementation of a control measure.</documentation>
          </annotation>
        </element>
        <element name="diseaseSurveillanceCapability" type="tns:DiseaseSurveillanceCapability" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:OperatorEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration less_than_or_equal
enumeration greater_than_or_equal
Used by
Source
 
<simpleType name="OperatorEnum">
  <restriction base="string">
    <enumeration value="less_than_or_equal"/>
    <enumeration value="greater_than_or_equal"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:DiseaseSurveillanceCapability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A disposition of a disease surveillance infrastructure to detect the outbreak of one particular disease in the geographical region the infrastructure aims to cover.
Diagram
Diagram apollo.tmp#DiseaseSurveillanceCapability_location apollo.tmp#DiseaseSurveillanceCapability_pathogen apollo.tmp#DiseaseSurveillanceCapability_speciesOfCase apollo.tmp#DiseaseSurveillanceCapability_caseDefinition apollo.tmp#DiseaseSurveillanceCapability_sensitivityOfCaseDetection apollo.tmp#DiseaseSurveillanceCapability_specificityOfCaseDetection apollo.tmp#DiseaseSurveillanceCapability_timeDelayOfCaseDetection
Used by
Model
Children tns:caseDefinition, tns:location, tns:pathogen, tns:sensitivityOfCaseDetection, tns:speciesOfCase, tns:specificityOfCaseDetection, tns:timeDelayOfCaseDetection
Source
 
<complexType name="DiseaseSurveillanceCapability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000266">
  <annotation>
    <documentation>A disposition of a disease surveillance infrastructure to detect the outbreak of one particular disease in the geographical region the infrastructure aims to cover.</documentation>
  </annotation>
  <sequence>
    <element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
    </element>
    <element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
    </element>
    <element name="speciesOfCase" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000485" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An identifier curated by the NCBI taxonomy database that has been used to identify the species of some organism that meets a case definition.</documentation>
      </annotation>
    </element>
    <element name="caseDefinition" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="sensitivityOfCaseDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000277" type="tns:Probability" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>The sensitivity of a system that classifies organisms into the binary categories of individual who meets the criteria of a particular case definition and individual who does NOT meet the criteria of a particular type of disease X.</documentation>
      </annotation>
    </element>
    <element name="specificityOfCaseDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000381" type="tns:Probability" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>The specificity of a system that classifies organisms into the binary categories of individual who meets the criteria of a particular case definition and individual who does NOT meet the criteria of a particular type of disease X.</documentation>
      </annotation>
    </element>
    <element name="timeDelayOfCaseDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000267" type="tns:Duration" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>The duration from the time an organism satisfies a case definition until a process or system detects the organism as satisfying that case definition</documentation>
      </annotation>
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:TreatmentSurveillanceTriggerDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infectious disease control trigger definition for a reactive control measure based on the outcome of disease surveillance.
Diagram
Diagram apollo.tmp#TriggerDefinition apollo.tmp#TreatmentSurveillanceTriggerDefinition_reactiveControlMeasureTest apollo.tmp#TreatmentSurveillanceTriggerDefinition_reactiveControlMeasureThreshold apollo.tmp#TreatmentSurveillanceTriggerDefinition_reactiveControlMeasureOperator apollo.tmp#TreatmentSurveillanceTriggerDefinition_unitOfMeasureForThreshold apollo.tmp#TreatmentSurveillanceTriggerDefinition_treatmentSurveillanceCapability
Type extension of tns:TriggerDefinition
Type hierarchy
Model
Children tns:reactiveControlMeasureOperator, tns:reactiveControlMeasureTest, tns:reactiveControlMeasureThreshold, tns:treatmentSurveillanceCapability, tns:unitOfMeasureForThreshold
Source
 
<complexType name="TreatmentSurveillanceTriggerDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000270">
  <annotation>
    <documentation>An infectious disease control trigger definition for a reactive control measure based on the outcome of disease surveillance.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:TriggerDefinition">
      <sequence>
        <element name="reactiveControlMeasureTest" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000130" type="token" maxOccurs="1" minOccurs="1">
        </element>
        <element name="reactiveControlMeasureThreshold" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000131" type="int" maxOccurs="1" minOccurs="1">
        </element>
        <element name="reactiveControlMeasureOperator" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000474" type="tns:OperatorEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="unitOfMeasureForThreshold" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000295" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="treatmentSurveillanceCapability" type="tns:TreatmentSurveillanceCapability" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:TreatmentSurveillanceCapability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A disposition of a treatment surveillance infrastructure to detect individuals who have received treatment in the geographical region the infrastructure aims to cover.
Diagram
Diagram apollo.tmp#TreatmentSurveillanceCapability_location apollo.tmp#TreatmentSurveillanceCapability_treatment apollo.tmp#TreatmentSurveillanceCapability_sensitivityOfTreatmentDetection apollo.tmp#TreatmentSurveillanceCapability_specificityOfTreatmentDetection apollo.tmp#TreatmentSurveillanceCapability_timeDelayOfTreatmentDetection
Used by
Model
Children tns:location, tns:sensitivityOfTreatmentDetection, tns:specificityOfTreatmentDetection, tns:timeDelayOfTreatmentDetection, tns:treatment
Source
 
<complexType name="TreatmentSurveillanceCapability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000394">
  <annotation>
    <documentation>A disposition of a treatment surveillance infrastructure to detect individuals who have received treatment in the geographical region the infrastructure aims to cover.</documentation>
  </annotation>
  <sequence>
    <element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
    </element>
    <element name="treatment" type="tns:IndividualTreatmentEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="sensitivityOfTreatmentDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000383" type="tns:Probability" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>The sensitivity of a system that classifies organisms into the binary categories of having received a particular treatment and not having received a particular treatment.</documentation>
      </annotation>
    </element>
    <element name="specificityOfTreatmentDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000382" type="tns:Probability" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>The specificity of a system that classifies organisms into the binary categories of having received a particular treatment and not having received a particular treatment.</documentation>
      </annotation>
    </element>
    <element name="timeDelayOfTreatmentDetection" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000291" type="tns:Duration" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>The duration from the time an individual receives a treatment until the time a system designed to detect that the treatment occurred detects it in a population</documentation>
      </annotation>
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:IndividualTreatmentEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration vaccination
enumeration antiviral_treatment
Used by
Source
 
<simpleType name="IndividualTreatmentEnum">
  <restriction base="string">
    <enumeration value="vaccination"/>
    <enumeration value="antiviral_treatment"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:IndividualTreatmentControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infectious disease control strategy that immediately targets individuals.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#IndividualTreatmentControlMeasure_pathogen apollo.tmp#IndividualTreatmentControlMeasure_taxonOfTreatedIndividual apollo.tmp#IndividualTreatmentControlMeasure_individualTreatment apollo.tmp#IndividualTreatmentControlMeasure_populationTreatmentCensus apollo.tmp#IndividualTreatmentControlMeasure_compliance apollo.tmp#IndividualTreatmentControlMeasure_delayFromSymptomsToTreatment apollo.tmp#IndividualTreatmentControlMeasure_treatmentSystemLogistics apollo.tmp#IndividualTreatmentControlMeasure_targetPopulationsAndPrioritizations
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Used by
Model
Children tns:compliance, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:delayFromSymptomsToTreatment, tns:description, tns:individualTreatment, tns:location, tns:logisticalSystems, tns:pathogen, tns:populationTreatmentCensus, tns:referenceId, tns:targetPopulationsAndPrioritizations, tns:taxonOfTreatedIndividual, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:treatmentSystemLogistics
Source
 
<complexType name="IndividualTreatmentControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000194">
  <annotation>
    <documentation>An infectious disease control strategy that immediately targets individuals.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
        </element>
        <element name="taxonOfTreatedIndividual" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
        <element name="individualTreatment" type="tns:Treatment" maxOccurs="1" minOccurs="1">
        </element>
        <element name="populationTreatmentCensus" type="tns:PopulationTreatmentCensus" maxOccurs="1" minOccurs="0">
        </element>
        <element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A measurement datum about the fraction of individuals in a population that elect to participate in a control strategy when offered.</documentation>
          </annotation>
        </element>
        <element name="delayFromSymptomsToTreatment" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000258" type="tns:Duration" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>The duration between the appearance of symptoms of a disease and the start of a treatment.</documentation>
          </annotation>
        </element>
        <element name="treatmentSystemLogistics" type="tns:TreatmentSystemLogistics" maxOccurs="unbounded" minOccurs="1">
        </element>
        <element name="targetPopulationsAndPrioritizations" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000282" type="tns:ControlMeasureTargetPopulationsAndPrioritization" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:Treatment
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A processual entity whose completion is hypothesized (by a healthcare provider) to alleviate the signs and symptoms associated with a disorder
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Treatment_description apollo.tmp#Treatment_speciesOfTreatedOrganism apollo.tmp#Treatment_pathogen apollo.tmp#Treatment_numDosesInTreatmentCourse apollo.tmp#Treatment_durationOfTreatmentCourse apollo.tmp#Treatment_treatmentContraindications
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:description, tns:durationOfTreatmentCourse, tns:numDosesInTreatmentCourse, tns:pathogen, tns:speciesOfTreatedOrganism, tns:treatmentContraindications
Source
 
<complexType name="Treatment" sawsdl:modelReference="http://purl.obolibrary.org/obo/OGMS_0000090">
  <annotation>
    <documentation>A processual entity whose completion is hypothesized (by a healthcare provider) to alleviate the signs and symptoms associated with a disorder</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1"/>
        <element name="speciesOfTreatedOrganism" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000460" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An identifier curated by the NCBI taxonomy database that specifies the taxonomic classification of some organism that is the recipient of some treatment.</documentation>
          </annotation>
        </element>
        <element name="pathogen" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000237" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1">
        </element>
        <element name="numDosesInTreatmentCourse" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000281" type="positiveInteger" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>The count of the number of doses that are part of a treatment course.</documentation>
          </annotation>
        </element>
        <element name="durationOfTreatmentCourse" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000280" type="tns:Duration" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A duration that measures the temporal interval occupied by a treatment course.</documentation>
          </annotation>
        </element>
        <element name="treatmentContraindications" type="tns:TreatmentContraindication" maxOccurs="unbounded" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:TreatmentContraindication
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A contraindication that increases the risk of a treatment.
Diagram
Diagram apollo.tmp#TreatmentContraindication_description apollo.tmp#TreatmentContraindication_simulatorReferencablePopulation apollo.tmp#TreatmentContraindication_fractionOfSimulatorReferencablePopulation
Used by
Model
Children tns:description, tns:fractionOfSimulatorReferencablePopulation, tns:simulatorReferencablePopulation
Source
 
<complexType name="TreatmentContraindication" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000378">
  <annotation>
    <documentation>A contraindication that increases the risk of a treatment.</documentation>
  </annotation>
  <sequence>
    <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0"/>
    <element name="simulatorReferencablePopulation" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000031" type="tns:TargetPopulationDefinition" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>A simulation of a population or populations of organisms of a particular biological taxon that simulates a particular type of event or types of event that occur in a specified time interval.</documentation>
      </annotation>
    </element>
    <element name="fractionOfSimulatorReferencablePopulation" type="tns:Fraction" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:TargetPopulationDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that is part of an infectious disease control strategy and that specifies the intended population to which one or more interventions in the control strategy will be applied.
Diagram
Diagram apollo.tmp#TargetPopulationDefinition_ageRange apollo.tmp#TargetPopulationDefinition_sex apollo.tmp#TargetPopulationDefinition_diseaseOutcome apollo.tmp#TargetPopulationDefinition_otherStratification
Used by
Model
Children tns:ageRange, tns:diseaseOutcome, tns:otherStratification, tns:sex
Source
 
<complexType name="TargetPopulationDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000375">
  <annotation>
    <documentation>An information content entity that is part of an infectious disease control strategy and that specifies the intended population to which one or more interventions in the control strategy will be applied.</documentation>
  </annotation>
  <sequence>
    <element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0">
    </element>
    <element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="0">
    </element>
    <element name="diseaseOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000204" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>A processual entity that is either the outcome of a disease course or a part of a disease course and has etiological relevance.</documentation>
      </annotation>
    </element>
    <element name="otherStratification" type="tns:PopulationStratificationEnum" maxOccurs="1" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:PopulationStratificationEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of token
Facets
enumeration essential_workforce
enumeration pregnant
enumeration high_risk
Used by
Source
 
<simpleType name="PopulationStratificationEnum">
  <restriction base="token">
    <enumeration value="essential_workforce"/>
    <enumeration value="pregnant"/>
    <enumeration value="high_risk"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:TreatmentSystemLogistics
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentSystemLogistics_description apollo.tmp#TreatmentSystemLogistics_location apollo.tmp#TreatmentSystemLogistics_supplySchedulePerDay apollo.tmp#TreatmentSystemLogistics_supplyScheduleUnits apollo.tmp#TreatmentSystemLogistics_administrationCapacityPerDay apollo.tmp#TreatmentSystemLogistics_administrationCapacityUnits
Used by
Model
Children tns:administrationCapacityPerDay, tns:administrationCapacityUnits, tns:description, tns:location, tns:supplySchedulePerDay, tns:supplyScheduleUnits
Source
 
<complexType name="TreatmentSystemLogistics">
  <sequence>
    <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0">
    </element>
    <element name="location" type="tns:Location" maxOccurs="1" minOccurs="1">
    </element>
    <element name="supplySchedulePerDay" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
    </element>
    <element name="supplyScheduleUnits" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="0">
    </element>
    <element name="administrationCapacityPerDay" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
    </element>
    <element name="administrationCapacityUnits" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ControlMeasureTargetPopulationsAndPrioritization
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ControlMeasureTargetPopulationsAndPrioritization_controlMeasureNamedPrioritizationScheme apollo.tmp#ControlMeasureTargetPopulationsAndPrioritization_controlMeasureTargetPopulationsAndPrioritization
Used by
Model
Children tns:controlMeasureNamedPrioritizationScheme, tns:controlMeasureTargetPopulationsAndPrioritization
Source
 
<complexType name="ControlMeasureTargetPopulationsAndPrioritization" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000127">
  <sequence>
    <choice>
      <element name="controlMeasureNamedPrioritizationScheme" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000517" type="tns:NamedPrioritizationSchemeEnum" maxOccurs="1" minOccurs="1">
        <annotation>
          <documentation>An action specification that is part of an infectious disease control strategy that has at least one rule pertaining to some control measure.</documentation>
        </annotation>
      </element>
      <element name="controlMeasureTargetPopulationsAndPrioritization" type="tns:TargetPriorityPopulation" maxOccurs="unbounded" minOccurs="1">
      </element>
    </choice>
  </sequence>
</complexType>
[ top ]
Simple Type tns:NamedPrioritizationSchemeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration treat_sick_only
enumeration ACIP
enumeration HHTAP
enumeration HHTAP100
enumeration none
Used by
Source
 
<simpleType name="NamedPrioritizationSchemeEnum">
  <restriction base="string">
    <enumeration value="treat_sick_only"/>
    <enumeration value="ACIP"/>
    <enumeration value="HHTAP"/>
    <enumeration value="HHTAP100"/>
    <enumeration value="none"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:TargetPriorityPopulation
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TargetPriorityPopulation_description apollo.tmp#TargetPriorityPopulation_targetPopulationDefinition apollo.tmp#TargetPriorityPopulation_targetPopulationEnum apollo.tmp#TargetPriorityPopulation_fractionOfTargetPopulationToPrioritize apollo.tmp#TargetPriorityPopulation_priority
Used by
Model
Children tns:description, tns:fractionOfTargetPopulationToPrioritize, tns:priority, tns:targetPopulationDefinition, tns:targetPopulationEnum
Source
 
<complexType name="TargetPriorityPopulation">
  <sequence>
    <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="token" maxOccurs="1" minOccurs="1"/>
    <choice>
      <element name="targetPopulationDefinition" type="tns:TargetPopulationDefinition" maxOccurs="1" minOccurs="1">
      </element>
      <element name="targetPopulationEnum" type="tns:TargetPopulationEnum" maxOccurs="1" minOccurs="1">
      </element>
    </choice>
    <element name="fractionOfTargetPopulationToPrioritize" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
    <element name="priority" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:TargetPopulationEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of token
Facets
enumeration all
enumeration members_of_the_same_household
enumeration newly_sick
enumeration household_member_of_infant
enumeration icuPatient
enumeration colonizedIcuPatient
enumeration icuPatient
enumeration colonizedWardPatient
enumeration colonizedLongTermCareFacilityResident
Used by
Source
 
<simpleType name="TargetPopulationEnum">
  <restriction base="token">
    <enumeration value="all"/>
    <enumeration value="members_of_the_same_household"/>
    <enumeration value="newly_sick"/>
    <enumeration value="household_member_of_infant"/>
    <enumeration value="icuPatient"/>
    <enumeration value="colonizedIcuPatient"/>
    <enumeration value="icuPatient"/>
    <enumeration value="colonizedWardPatient"/>
    <enumeration value="colonizedLongTermCareFacilityResident"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:RingIndividualTreatmentControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An individual treatment control strategy that immediately targets individuals in the population who are at the perimeter of an epidemic.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#IndividualTreatmentControlMeasure_pathogen apollo.tmp#IndividualTreatmentControlMeasure_taxonOfTreatedIndividual apollo.tmp#IndividualTreatmentControlMeasure_individualTreatment apollo.tmp#IndividualTreatmentControlMeasure_populationTreatmentCensus apollo.tmp#IndividualTreatmentControlMeasure_compliance apollo.tmp#IndividualTreatmentControlMeasure_delayFromSymptomsToTreatment apollo.tmp#IndividualTreatmentControlMeasure_treatmentSystemLogistics apollo.tmp#IndividualTreatmentControlMeasure_targetPopulationsAndPrioritizations apollo.tmp#IndividualTreatmentControlMeasure apollo.tmp#RingIndividualTreatmentControlMeasure_ringDiameterInMeters
Type extension of tns:IndividualTreatmentControlMeasure
Type hierarchy
Model
Children tns:compliance, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:delayFromSymptomsToTreatment, tns:description, tns:individualTreatment, tns:location, tns:logisticalSystems, tns:pathogen, tns:populationTreatmentCensus, tns:referenceId, tns:ringDiameterInMeters, tns:targetPopulationsAndPrioritizations, tns:taxonOfTreatedIndividual, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:treatmentSystemLogistics
Source
 
<complexType name="RingIndividualTreatmentControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000409">
  <annotation>
    <documentation>An individual treatment control strategy that immediately targets individuals in the population who are at the perimeter of an epidemic.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:IndividualTreatmentControlMeasure">
      <sequence>
        <element name="ringDiameterInMeters" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000430" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A scalar value specification that gives the diameter in meters of the circular area around which all organisms in a population are living will receive a vaccination as part of a ring vaccination control measure.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:Vaccination
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A treatment that consists of the administration of antigenic material to stimulate an individual's immune system to develop adaptive immunity to a pathogen.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Treatment_description apollo.tmp#Treatment_speciesOfTreatedOrganism apollo.tmp#Treatment_pathogen apollo.tmp#Treatment_numDosesInTreatmentCourse apollo.tmp#Treatment_durationOfTreatmentCourse apollo.tmp#Treatment_treatmentContraindications apollo.tmp#Treatment apollo.tmp#Vaccination_vaccineId apollo.tmp#Vaccination_vaccinationEfficacies
Type extension of tns:Treatment
Type hierarchy
Model
Children tns:description, tns:durationOfTreatmentCourse, tns:numDosesInTreatmentCourse, tns:pathogen, tns:speciesOfTreatedOrganism, tns:treatmentContraindications, tns:vaccinationEfficacies, tns:vaccineId
Source
 
<complexType name="Vaccination" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000142">
  <annotation>
    <documentation>A treatment that consists of the administration of antigenic material to stimulate an individual's immune system to develop adaptive immunity to a pathogen.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Treatment">
      <sequence>
        <element name="vaccineId" type="tns:vaccineOntologyId" maxOccurs="1" minOccurs="1"/>
        <element name="vaccinationEfficacies" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000025" type="tns:VaccinationEfficacyForSimulatorConfiguration" maxOccurs="unbounded" minOccurs="1">
          <annotation>
            <documentation>The infectious disease treatment efficacy of a vaccine.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:VaccinationEfficacyForSimulatorConfiguration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#VaccinationEfficacyForSimulatorConfiguration_averageVaccinationEfficacy apollo.tmp#VaccinationEfficacyForSimulatorConfiguration_vaccinationEfficacyConditionedOnAgeRange apollo.tmp#VaccinationEfficacyForSimulatorConfiguration_vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose
Type extension of tns:TreatmentEfficacy
Type hierarchy
Used by
Model
Children tns:averageVaccinationEfficacy, tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:strainIdentifier, tns:vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose, tns:vaccinationEfficacyConditionedOnAgeRange
Source
 
<complexType name="VaccinationEfficacyForSimulatorConfiguration">
  <complexContent>
    <extension base="tns:TreatmentEfficacy">
      <sequence>
        <element name="averageVaccinationEfficacy" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
        <element name="vaccinationEfficacyConditionedOnAgeRange" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
        <element name="vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose" type="tns:VaccinationEfficacyConditionedOnTimeSinceDose" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:TreatmentEfficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The disposition of one or more portions of material entity, when administered to a susceptible organism by a certain route and according to a certain schedule, to produce a structural change in an organism of a specific species, whereby this structural change serves as the physical basis of a protective resistance disposition.
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome
Used by
Model
Children tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:strainIdentifier
Source
 
<complexType name="TreatmentEfficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000227">
  <annotation>
    <documentation>The disposition of one or more portions of material entity, when administered to a susceptible organism by a certain route and according to a certain schedule, to produce a structural change in an organism of a specific species, whereby this structural change serves as the physical basis of a protective resistance disposition.</documentation>
  </annotation>
  <sequence>
    <element name="hostIdentifier" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
    <element name="strainIdentifier" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
    <element name="forTreatmentPreventableOutcome" type="tns:TreatmentPreventableOutcomeEnum" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:TreatmentPreventableOutcomeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An objective specification that specifies the disease outcome that a treatment seeks to prevent.
Diagram
Diagram
Type restriction of string
Facets
enumeration infection
enumeration infectiousness
enumeration sickness requiring medical attention
enumeration sickness requiring intensive care
enumeration death
Used by
Source
 
<simpleType name="TreatmentPreventableOutcomeEnum" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000290">
  <annotation>
    <documentation>An objective specification that specifies the disease outcome that a treatment seeks to prevent.</documentation>
  </annotation>
  <restriction base="string">
    <enumeration value="infection"/>
    <enumeration value="infectiousness"/>
    <enumeration value="sickness requiring medical attention"/>
    <enumeration value="sickness requiring intensive care"/>
    <enumeration value="death"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:VaccinationEfficacyConditionedOnTimeSinceDose
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VaccinationEfficacyConditionedOnTimeSinceDose_numberOfDosesAdministered apollo.tmp#VaccinationEfficacyConditionedOnTimeSinceDose_timeIntervalLabelDefinitions apollo.tmp#VaccinationEfficacyConditionedOnTimeSinceDose_vaccinationEfficacyConditionedOnTimeSinceMostRecentDose
Used by
Model
Children tns:numberOfDosesAdministered, tns:timeIntervalLabelDefinitions, tns:vaccinationEfficacyConditionedOnTimeSinceMostRecentDose
Source
 
<complexType name="VaccinationEfficacyConditionedOnTimeSinceDose">
  <sequence>
    <element name="numberOfDosesAdministered" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
    <element name="timeIntervalLabelDefinitions" type="tns:TimeAxisCategoryLabels" maxOccurs="unbounded" minOccurs="1"/>
    <element name="vaccinationEfficacyConditionedOnTimeSinceMostRecentDose" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:TimeAxisCategoryLabels
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TimeAxisCategoryLabels_label apollo.tmp#TimeAxisCategoryLabels_simulatorTimeEarliest apollo.tmp#TimeAxisCategoryLabels_simulatorTimeLatest
Used by
Model
Children tns:label, tns:simulatorTimeEarliest, tns:simulatorTimeLatest
Source
 
<complexType name="TimeAxisCategoryLabels">
  <sequence>
    <element name="label" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000009" type="token" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label</documentation>
      </annotation>
    </element>
    <element name="simulatorTimeEarliest" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
    <element name="simulatorTimeLatest" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:Vaccine
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A vaccine is a processed material with the function that when administered, it prevents or ameliorates a disorder in a target organism by inducing or modifying adaptive immune responses specific to the antigens in the vaccine.
Diagram
Diagram apollo.tmp#Vaccine_description apollo.tmp#Vaccine_vaccineIdentifier apollo.tmp#Vaccine_valence
Model
Children tns:description, tns:vaccineIdentifier, tns:valence
Source
 
<complexType name="Vaccine" sawsdl:modelReference="http://purl.obolibrary.org/obo/VO_0000001">
  <annotation>
    <documentation>A vaccine is a processed material with the function that when administered, it prevents or ameliorates a disorder in a target organism by inducing or modifying adaptive immune responses specific to the antigens in the vaccine.</documentation>
  </annotation>
  <sequence>
    <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="vaccineIdentifier" type="token" maxOccurs="1" minOccurs="1">
    </element>
    <element name="valence" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000137" type="positiveInteger" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:VaccineContraindications
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A vaccine contraindication is a contraindication that increases the risks of a vaccination.
Diagram
Diagram apollo.tmp#VaccineContraindications_infants apollo.tmp#VaccineContraindications_preschoolers apollo.tmp#VaccineContraindications_schoolAgeChildren apollo.tmp#VaccineContraindications_youngAdults apollo.tmp#VaccineContraindications_olderAdults apollo.tmp#VaccineContraindications_elderly apollo.tmp#VaccineContraindications_pregnantAdultsRestricted
Model
Children tns:elderly, tns:infants, tns:olderAdults, tns:pregnantAdultsRestricted, tns:preschoolers, tns:schoolAgeChildren, tns:youngAdults
Source
 
<complexType name="VaccineContraindications" sawsdl:modelReference="http://purl.obolibrary.org/obo/VO_0000207">
  <annotation>
    <documentation>A vaccine contraindication is a contraindication that increases the risks of a vaccination.</documentation>
  </annotation>
  <sequence>
    <element name="infants" type="boolean" maxOccurs="1" minOccurs="0"/>
    <element name="preschoolers" type="boolean" maxOccurs="1" minOccurs="0"/>
    <element name="schoolAgeChildren" type="boolean" maxOccurs="1" minOccurs="0"/>
    <element name="youngAdults" type="boolean" maxOccurs="1" minOccurs="0"/>
    <element name="olderAdults" type="boolean" maxOccurs="1" minOccurs="0"/>
    <element name="elderly" type="boolean" maxOccurs="1" minOccurs="0"/>
    <element name="pregnantAdultsRestricted" type="boolean" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:AntiviralTreatment
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A treatment with an antiviral drug.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Treatment_description apollo.tmp#Treatment_speciesOfTreatedOrganism apollo.tmp#Treatment_pathogen apollo.tmp#Treatment_numDosesInTreatmentCourse apollo.tmp#Treatment_durationOfTreatmentCourse apollo.tmp#Treatment_treatmentContraindications apollo.tmp#Treatment apollo.tmp#AntiviralTreatment_antiviralId apollo.tmp#AntiviralTreatment_antiviralTreatmentEfficacy
Type extension of tns:Treatment
Type hierarchy
Model
Children tns:antiviralId, tns:antiviralTreatmentEfficacy, tns:description, tns:durationOfTreatmentCourse, tns:numDosesInTreatmentCourse, tns:pathogen, tns:speciesOfTreatedOrganism, tns:treatmentContraindications
Source
 
<complexType name="AntiviralTreatment" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000171">
  <annotation>
    <documentation>A treatment with an antiviral drug.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Treatment">
      <sequence>
        <element name="antiviralId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000122" type="token" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>a unique identifier that refers to an antiviral drug product</documentation>
          </annotation>
        </element>
        <element name="antiviralTreatmentEfficacy" type="tns:AntiviralTreatmentEfficacy" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:AntiviralTreatmentEfficacy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The infectious disease treatment efficacy of an antiviral drug.
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#AntiviralTreatmentEfficacy_efficacy
Type extension of tns:TreatmentEfficacy
Type hierarchy
Used by
Model
Children tns:efficacy, tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:strainIdentifier
Source
 
<complexType name="AntiviralTreatmentEfficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000048">
  <annotation>
    <documentation>The infectious disease treatment efficacy of an antiviral drug.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:TreatmentEfficacy">
      <sequence>
        <element name="efficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000454" type="tns:Probability" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A disposition of an organism to (i) undergo some bodily benefit that (ii) is triggered by a planned process.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DrugTreatment
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A treatment with a drug product.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Treatment_description apollo.tmp#Treatment_speciesOfTreatedOrganism apollo.tmp#Treatment_pathogen apollo.tmp#Treatment_numDosesInTreatmentCourse apollo.tmp#Treatment_durationOfTreatmentCourse apollo.tmp#Treatment_treatmentContraindications apollo.tmp#Treatment apollo.tmp#DrugTreatment_drugId apollo.tmp#DrugTreatment_drugTreatmentEfficacy
Type extension of tns:Treatment
Type hierarchy
Model
Children tns:description, tns:drugId, tns:drugTreatmentEfficacy, tns:durationOfTreatmentCourse, tns:numDosesInTreatmentCourse, tns:pathogen, tns:speciesOfTreatedOrganism, tns:treatmentContraindications
Source
 
<complexType name="DrugTreatment" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000318">
  <annotation>
    <documentation>A treatment with a drug product.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Treatment">
      <sequence>
        <element name="drugId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000461" type="token" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An identifier that denotes a drug product.</documentation>
          </annotation>
        </element>
        <element name="drugTreatmentEfficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000502" type="tns:DrugTreatmentEfficacyForSimulatorConfiguration" maxOccurs="unbounded" minOccurs="1">
          <annotation>
            <documentation>The efficacy measured for some instance(s) of drug treatment for preventing or ameliorating some disease outcome.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DrugTreatmentEfficacyForSimulatorConfiguration
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#DrugTreatmentEfficacyForSimulatorConfiguration_averageDrugEfficacy apollo.tmp#DrugTreatmentEfficacyForSimulatorConfiguration_drugEfficacyConditionedOnAgeRange apollo.tmp#DrugTreatmentEfficacyForSimulatorConfiguration_drugEfficaciesConditionedOnCurrentDiseaseOutcome
Type extension of tns:TreatmentEfficacy
Type hierarchy
Used by
Model
Children tns:averageDrugEfficacy, tns:drugEfficaciesConditionedOnCurrentDiseaseOutcome, tns:drugEfficacyConditionedOnAgeRange, tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:strainIdentifier
Source
 
<complexType name="DrugTreatmentEfficacyForSimulatorConfiguration">
  <complexContent>
    <extension base="tns:TreatmentEfficacy">
      <sequence>
        <element name="averageDrugEfficacy" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
        <element name="drugEfficacyConditionedOnAgeRange" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
        <element name="drugEfficaciesConditionedOnCurrentDiseaseOutcome" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:IndividualDecolonization
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Treatment_description apollo.tmp#Treatment_speciesOfTreatedOrganism apollo.tmp#Treatment_pathogen apollo.tmp#Treatment_numDosesInTreatmentCourse apollo.tmp#Treatment_durationOfTreatmentCourse apollo.tmp#Treatment_treatmentContraindications apollo.tmp#Treatment apollo.tmp#IndividualDecolonization_name apollo.tmp#IndividualDecolonization_efficacies
Type extension of tns:Treatment
Type hierarchy
Model
Children tns:description, tns:durationOfTreatmentCourse, tns:efficacies, tns:name, tns:numDosesInTreatmentCourse, tns:pathogen, tns:speciesOfTreatedOrganism, tns:treatmentContraindications
Source
 
<complexType name="IndividualDecolonization">
  <complexContent>
    <extension base="tns:Treatment">
      <sequence>
        <element name="name" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0020000" type="tns:IndividualDecolonizationEnum" maxOccurs="1" minOccurs="1"/>
        <element name="efficacies" type="string" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:IndividualDecolonizationEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration chlorhexidine
enumeration chlorhexidineAndIntranasalMupirocin
Used by
Source
 
<simpleType name="IndividualDecolonizationEnum">
  <restriction base="string">
    <enumeration value="chlorhexidine"/>
    <enumeration value="chlorhexidineAndIntranasalMupirocin"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:VaccinationEfficacyInferred
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data item inferring a vaccination efficacy based on epidemiological data.
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#VaccinationEfficacyInferred_inferredFromTheseStudies apollo.tmp#VaccinationEfficacyInferred_vaccinationEfficacyModel
Type extension of tns:TreatmentEfficacy
Type hierarchy
Model
Children tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:inferredFromTheseStudies, tns:strainIdentifier, tns:vaccinationEfficacyModel
Source
 
<complexType name="VaccinationEfficacyInferred" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000193">
  <annotation>
    <documentation>A data item inferring a vaccination efficacy based on epidemiological data.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:TreatmentEfficacy">
      <sequence>
        <element name="inferredFromTheseStudies" type="tns:VaccinationEfficacyStudy" maxOccurs="unbounded" minOccurs="1"/>
        <element name="vaccinationEfficacyModel" type="tns:BayesianNetwork" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:VaccinationEfficacyStudy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
a study design execution that has as its specified output one or more measured vaccination efficacy data items
Diagram
Diagram apollo.tmp#VaccinationEfficacyStudy_description apollo.tmp#VaccinationEfficacyStudy_vaccinationPreventableOutcome apollo.tmp#VaccinationEfficacyStudy_vaccinationEfficacyMeasured apollo.tmp#VaccinationEfficacyStudy_dataSets apollo.tmp#VaccinationEfficacyStudy_references
Used by
Model
Children tns:dataSets, tns:description, tns:references, tns:vaccinationEfficacyMeasured, tns:vaccinationPreventableOutcome
Source
 
<complexType name="VaccinationEfficacyStudy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000090">
  <annotation>
    <documentation>a study design execution that has as its specified output one or more measured vaccination efficacy data items</documentation>
  </annotation>
  <sequence>
    <element name="description" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000476" type="string" maxOccurs="1" minOccurs="0"/>
    <element name="vaccinationPreventableOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000218" type="tns:TreatmentPreventableOutcomeEnum" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An objective specification that specifies the disease outcome a vaccination seeks to prevent.</documentation>
      </annotation>
    </element>
    <element name="vaccinationEfficacyMeasured" type="tns:VaccinationEfficacyMeasured" maxOccurs="unbounded" minOccurs="1"/>
    <element name="dataSets" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000100" type="string" maxOccurs="unbounded" minOccurs="1">
      <annotation>
        <documentation>A data item that is an aggregate of other data items of the same type that have something in common. Averages and distributions can be determined for data sets.</documentation>
      </annotation>
    </element>
    <element name="references" type="string" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:VaccinationEfficacyMeasured
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A measurement datum that is about a vaccination efficacy and is the specified output of a vaccination efficacy study.
Diagram
Diagram apollo.tmp#TreatmentEfficacy_hostIdentifier apollo.tmp#TreatmentEfficacy_strainIdentifier apollo.tmp#TreatmentEfficacy_forTreatmentPreventableOutcome apollo.tmp#TreatmentEfficacy apollo.tmp#VaccinationEfficacyMeasured_measuredEfficacyValue
Type extension of tns:TreatmentEfficacy
Type hierarchy
Used by
Model
Children tns:forTreatmentPreventableOutcome, tns:hostIdentifier, tns:measuredEfficacyValue, tns:strainIdentifier
Source
 
<complexType name="VaccinationEfficacyMeasured" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000089">
  <annotation>
    <documentation>A measurement datum that is about a vaccination efficacy and is the specified output of a vaccination efficacy study.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:TreatmentEfficacy">
      <sequence>
        <element name="measuredEfficacyValue" type="tns:ConditionalProbabilityTable" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ConditionalProbabilityTable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ConditionalProbabilityTable_axisDefinitions apollo.tmp#ConditionalProbabilityTable_pointProbabilities apollo.tmp#ConditionalProbabilityTable_parametricDistribution
Used by
Model
Children tns:axisDefinitions, tns:parametricDistribution, tns:pointProbabilities
Source
 
<complexType name="ConditionalProbabilityTable">
  <sequence>
    <element name="axisDefinitions" type="tns:ArrayDimensionsDefinition" maxOccurs="1" minOccurs="1"/>
    <choice>
      <element name="pointProbabilities" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
      <element name="parametricDistribution" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
    </choice>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ArrayDimensionsDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="ArrayDimensionsDefinition"/>
[ top ]
Complex Type tns:BayesianNetwork
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UncertainValue apollo.tmp#ProbabilityDistribution_referenceId apollo.tmp#ProbabilityDistribution apollo.tmp#BayesianNetwork_networkStructure apollo.tmp#BayesianNetwork_CPTs apollo.tmp#BayesianNetwork_PPFs apollo.tmp#BayesianNetwork_GeNIE_XML
Type extension of tns:ProbabilityDistribution
Type hierarchy
Used by
Model
Children tns:CPTs, tns:GeNIE_XML, tns:PPFs, tns:networkStructure, tns:referenceId
Source
 
<complexType name="BayesianNetwork" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000082">
  <complexContent>
    <extension base="tns:ProbabilityDistribution">
      <sequence>
        <element name="networkStructure" type="tns:BayesianNetworkStructureType" maxOccurs="1" minOccurs="1"/>
        <element name="CPTs" type="tns:ConditionalProbabilityTable" maxOccurs="unbounded" minOccurs="0"/>
        <element name="PPFs" type="tns:PrototypicalProbabilityFunction" maxOccurs="unbounded" minOccurs="0"/>
        <element name="GeNIE_XML" type="tns:GeNIE_XMLType" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:BayesianNetworkStructureType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="BayesianNetworkStructureType"/>
[ top ]
Complex Type tns:PrototypicalProbabilityFunction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="PrototypicalProbabilityFunction"/>
[ top ]
Complex Type tns:GeNIE_XMLType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GeNIE_XMLType_theXML
Used by
Model
Children tns:theXML
Source
 
<complexType name="GeNIE_XMLType">
  <sequence>
    <element name="theXML" type="string" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:PlaceClosureControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
an infectious disease control strategy that has an action specification that is realized in closing facilities where organisms congregate during times when the facilities normally would be open.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#PlaceClosureControlMeasure_placeClass apollo.tmp#PlaceClosureControlMeasure_closeIndividualPlacesIndependently apollo.tmp#PlaceClosureControlMeasure_closurePeriod apollo.tmp#PlaceClosureControlMeasure_householdTransmissionMultiplier apollo.tmp#PlaceClosureControlMeasure_communityTransmissionMultiplier
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Model
Children tns:closeIndividualPlacesIndependently, tns:closurePeriod, tns:communityTransmissionMultiplier, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:householdTransmissionMultiplier, tns:location, tns:logisticalSystems, tns:placeClass, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Source
 
<complexType name="PlaceClosureControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000229">
  <annotation>
    <documentation>an infectious disease control strategy that has an action specification that is realized in closing facilities where organisms congregate during times when the facilities normally would be open.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="placeClass" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="closeIndividualPlacesIndependently" type="boolean" maxOccurs="1" minOccurs="1">
        </element>
        <element name="closurePeriod" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000287" type="tns:Duration" maxOccurs="1" minOccurs="1">
        </element>
        <element name="householdTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000284" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a household.</documentation>
          </annotation>
        </element>
        <element name="communityTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000288" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:PlaceEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration preschool
enumeration primarySchool
enumeration secondarySchool
enumeration allSchools
enumeration allSchoolsOfOneLevelInOneTract
enumeration workplace
enumeration nzaraCottonFactory
enumeration home
Used by
Source
 
<simpleType name="PlaceEnum">
  <restriction base="string">
    <enumeration value="preschool"/>
    <enumeration value="primarySchool"/>
    <enumeration value="secondarySchool"/>
    <enumeration value="allSchools"/>
    <enumeration value="allSchoolsOfOneLevelInOneTract"/>
    <enumeration value="workplace"/>
    <enumeration value="nzaraCottonFactory"/>
    <enumeration value="home"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:CaseQuarantineControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
an infectious disease control strategy that has an action specification that is realized in isolating organsims who are infectious.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#CaseQuarantineControlMeasure_quarantinePeriod apollo.tmp#CaseQuarantineControlMeasure_compliance apollo.tmp#CaseQuarantineControlMeasure_householdTransmissionMultiplier apollo.tmp#CaseQuarantineControlMeasure_schoolTransmissionMultiplier apollo.tmp#CaseQuarantineControlMeasure_workplaceTransmissionMultiplier
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Model
Children tns:compliance, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:householdTransmissionMultiplier, tns:location, tns:logisticalSystems, tns:quarantinePeriod, tns:referenceId, tns:schoolTransmissionMultiplier, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:workplaceTransmissionMultiplier
Source
 
<complexType name="CaseQuarantineControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000230">
  <annotation>
    <documentation>an infectious disease control strategy that has an action specification that is realized in isolating organsims who are infectious.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="quarantinePeriod" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000449" type="tns:Duration" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A temporal region occupied by some process wherein one or more potentially infectious contact organisms (i.e., contacted organisms) are under physical isolation from other organisms within a population.</documentation>
          </annotation>
        </element>
        <element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
        <element name="householdTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000284" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
        </element>
        <element name="schoolTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000283" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a school.</documentation>
          </annotation>
        </element>
        <element name="workplaceTransmissionMultiplier" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000285" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An epidemic simulator action specification that specifies the factor by which to multiply the transmission coefficient for contacts that occur in a workplace.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ContactIsolationControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A case isolation control measure that has an action specification that is realized in preventing one or more infectious organisms from having physical contact with other organisms.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#ContactIsolationControlMeasure_contactDefinition apollo.tmp#ContactIsolationControlMeasure_isolationPeriod apollo.tmp#ContactIsolationControlMeasure_compliance apollo.tmp#ContactIsolationControlMeasure_efficacy
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Model
Children tns:compliance, tns:contactDefinition, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:efficacy, tns:isolationPeriod, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Source
 
<complexType name="ContactIsolationControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000489">
  <annotation>
    <documentation>A case isolation control measure that has an action specification that is realized in preventing one or more infectious organisms from having physical contact with other organisms.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="contactDefinition" type="tns:ContactDefinition" maxOccurs="1" minOccurs="1">
        </element>
        <element name="isolationPeriod" type="tns:Duration" maxOccurs="1" minOccurs="1">
        </element>
        <element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
        <element name="efficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000454" type="tns:ProbabilityDistribution" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ContactDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies which kinds of processes involving an interaction between a given organism and either (1) another, potentially infectious organism or (2) a contaminated environment have a sufficiently high probability of resultling in an infection acquisition by the organism to be of interest to an outbreak investigation.
Diagram
Diagram apollo.tmp#ContactDefinition_apolloLabel apollo.tmp#ContactDefinition_investigationLabel apollo.tmp#ContactDefinition_investigationDefinition apollo.tmp#ContactDefinition_referenceId
Used by
Model
Children tns:apolloLabel, tns:investigationDefinition, tns:investigationLabel, tns:referenceId
Source
 
<complexType name="ContactDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000408">
  <annotation>
    <documentation>An information content entity that specifies which kinds of processes involving an interaction between a given organism and either (1) another, potentially infectious organism or (2) a contaminated environment have a sufficiently high probability of resultling in an infection acquisition by the organism to be of interest to an outbreak investigation.</documentation>
  </annotation>
  <sequence>
    <element name="apolloLabel" type="tns:ContactDefinitionEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="investigationLabel" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001628" type="token" maxOccurs="1" minOccurs="1">
    </element>
    <element name="investigationDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001615" type="token" maxOccurs="1" minOccurs="1">
    </element>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:BorderControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A travel-related infectious disease control strategy that has an action specification that is realized in restricting movement of organisms across international borders.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#BorderControlMeasure_probabilityEntryDenied apollo.tmp#BorderControlMeasure_probabilityExitDenied
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:probabilityEntryDenied, tns:probabilityExitDenied, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Source
 
<complexType name="BorderControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000228">
  <annotation>
    <documentation>A travel-related infectious disease control strategy that has an action specification that is realized in restricting movement of organisms across international borders.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="probabilityEntryDenied" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000278" type="tns:Probability" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An information content entity specifying the probability that entry is denied as part of a border control strategy.</documentation>
          </annotation>
        </element>
        <element name="probabilityExitDenied" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000279" type="tns:Probability" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>An information content entity specifying the probability that exit is denied as part of a border control strategy.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:VectorControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infectious disease control strategy that has a vector control action specification as part.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#VectorControlMeasure_vectorTaxonId
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Used by
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:vectorTaxonId
Source
 
<complexType name="VectorControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000308">
  <annotation>
    <documentation>An infectious disease control strategy that has a vector control action specification as part.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="vectorTaxonId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:InsecticideTreatedNetControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An adult vector control strategy that has 1) an action specification that is realized by the use of insecticide-treated nets within households, and 2) an objective specification that is realized by preventing potentially infectious contacting between some mosquito vector and some human host.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#VectorControlMeasure_vectorTaxonId apollo.tmp#VectorControlMeasure apollo.tmp#InsecticideTreatedNetControlMeasure_netHolingRate apollo.tmp#InsecticideTreatedNetControlMeasure_nightlyProbabilityOfUse apollo.tmp#InsecticideTreatedNetControlMeasure_insecticideEfficacyDecayRate
Type extension of tns:VectorControlMeasure
Type hierarchy
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:insecticideEfficacyDecayRate, tns:location, tns:logisticalSystems, tns:netHolingRate, tns:nightlyProbabilityOfUse, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:vectorTaxonId
Source
 
<complexType name="InsecticideTreatedNetControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000499">
  <annotation>
    <documentation>An adult vector control strategy that has 1) an action specification that is realized by the use of insecticide-treated nets within households, and 2) an objective specification that is realized by preventing potentially infectious contacting between some mosquito vector and some human host.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:VectorControlMeasure">
      <sequence>
        <element name="netHolingRate" type="tns:Rate" maxOccurs="1" minOccurs="1"/>
        <element name="nightlyProbabilityOfUse" type="tns:Probability" maxOccurs="1" minOccurs="1">
        </element>
        <element name="insecticideEfficacyDecayRate" type="tns:Rate" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:WolbachiaControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A vector control strategy that is realized by releasing individuals of the vector population infected with bacteria of the taxon Wolbachia to inhibit reproduction of individuals in the vector population.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#VectorControlMeasure_vectorTaxonId apollo.tmp#VectorControlMeasure apollo.tmp#WolbachiaControlMeasure_wolbachiaSitesEveryNth apollo.tmp#WolbachiaControlMeasure_wolbachiaSeedAdultsPerHouse apollo.tmp#WolbachiaControlMeasure_clearWolbachiaOnMigration apollo.tmp#WolbachiaControlMeasure_wolbachiaReleaseInterval apollo.tmp#WolbachiaControlMeasure_wolbachiaReleaseSites apollo.tmp#WolbachiaControlMeasure_wolbachiaEffectOnEggMortalityRate apollo.tmp#WolbachiaControlMeasure_wolbachiaEffectOnAdultMortalityRate apollo.tmp#WolbachiaControlMeasure_wolbachiaEffectOnLarvalMortalityRate apollo.tmp#WolbachiaControlMeasure_wolbachiaEffectOnFecundity apollo.tmp#WolbachiaControlMeasure_wolbachiaEffectOnMatingProbability apollo.tmp#WolbachiaControlMeasure_wolbachiaEffectOnLeakageRate apollo.tmp#WolbachiaControlMeasure_wolbachiaEffectOnVectorialCapacity apollo.tmp#WolbachiaControlMeasure_wolbachiaPreReleaseAdultSuppressionEfficacy apollo.tmp#WolbachiaControlMeasure_wolbachiaPreReleaseLarvalSuppressionEfficacy
Type extension of tns:VectorControlMeasure
Type hierarchy
Model
Children tns:clearWolbachiaOnMigration, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:vectorTaxonId, tns:wolbachiaEffectOnAdultMortalityRate, tns:wolbachiaEffectOnEggMortalityRate, tns:wolbachiaEffectOnFecundity, tns:wolbachiaEffectOnLarvalMortalityRate, tns:wolbachiaEffectOnLeakageRate, tns:wolbachiaEffectOnMatingProbability, tns:wolbachiaEffectOnVectorialCapacity, tns:wolbachiaPreReleaseAdultSuppressionEfficacy, tns:wolbachiaPreReleaseLarvalSuppressionEfficacy, tns:wolbachiaReleaseInterval, tns:wolbachiaReleaseSites, tns:wolbachiaSeedAdultsPerHouse, tns:wolbachiaSitesEveryNth
Source
 
<complexType name="WolbachiaControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000390">
  <annotation>
    <documentation>A vector control strategy that is realized by releasing individuals of the vector population infected with bacteria of the taxon Wolbachia to inhibit reproduction of individuals in the vector population.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:VectorControlMeasure">
      <sequence>
        <element name="wolbachiaSitesEveryNth" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000411" type="positiveInteger" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A vector release site action specification for a Wolbachia control measure.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaSeedAdultsPerHouse" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000426" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A vector control action specification that specifies the number of Wolbachia-infected adult mosquitoes to be released at each household for some Wolbachia control measure.</documentation>
          </annotation>
        </element>
        <element name="clearWolbachiaOnMigration" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000427" type="boolean" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An epidemic simulator action specification that when set to true, results in the simuator clearing each simulated Wolbachia-infected mosquito of its simulated Wolbachia infection whenever it migrates out of the simulated population location.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaReleaseInterval" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000423" type="tns:FixedDuration" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A seed release interval for a Wolbachia control measure.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaReleaseSites" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000410" type="tns:WolbachiaReleaseSiteEnum" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A seed site for a Wolbachia control measure.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaEffectOnEggMortalityRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000418" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A process of change in the egg mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaEffectOnAdultMortalityRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000419" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A process of change in the adult mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaEffectOnLarvalMortalityRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000420" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A process of change in the larval mortality rate of a mosquito population that is the outcome of an infection in that population by a Wolbachia bacteria population.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaEffectOnFecundity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000421" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A process of change in fecundity of females in a mosquito population that is the outcome of an infection in that population with a Wolbachia bacteria population.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaEffectOnMatingProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000431" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An epidemic simulator actions specification that specifies the factor by which to multiply the mating probability of a male mosquito if it is infected with a Wolbachia bacterium.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaEffectOnLeakageRate" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000412" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>The rate at which offspring of the Wolbachia-infected female mosquito subpopulation (of the overall mosquito population) are not infected with Wolbachia.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaEffectOnVectorialCapacity" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000413" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>The rate at which bites of mosquitoes infected with both Wolbachia and a particular pathogen such as dengue result in an infection in a susceptible human host.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaPreReleaseAdultSuppressionEfficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000415" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An adult vector control strategy that is used prior to a Wolbachia vector control strategy to increase the percentage of the adult population that gets infected with Wolbachia.</documentation>
          </annotation>
        </element>
        <element name="wolbachiaPreReleaseLarvalSuppressionEfficacy" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000416" type="tns:Fraction" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>An larvicide vector control strategy that is used prior to a Wolbachia vector control strategy to increase the percentage of the population that gets infected with Wolbachia.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:WolbachiaReleaseSiteEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration roads
enumeration ovi-sites
enumeration front-doors
Used by
Source
 
<simpleType name="WolbachiaReleaseSiteEnum">
  <restriction base="string">
    <enumeration value="roads"/>
    <enumeration value="ovi-sites"/>
    <enumeration value="front-doors"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:LarvicideControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A vector control strategy that has an action specification that is realized by reducing the number of larval-stage organisms of a vector population.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#VectorControlMeasure_vectorTaxonId apollo.tmp#VectorControlMeasure apollo.tmp#LarvicideControlMeasure_coverRadius
Type extension of tns:VectorControlMeasure
Type hierarchy
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:coverRadius, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:vectorTaxonId
Source
 
<complexType name="LarvicideControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000328">
  <annotation>
    <documentation>A vector control strategy that has an action specification that is realized by reducing the number of larval-stage organisms of a vector population.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:VectorControlMeasure">
      <sequence>
        <element name="coverRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000459" type="tns:Distance" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A length measurement datum that specifies the radius of a circle that defines the geographical region in which some infectious disease control strategy will be implemented.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:IndoorResidualSprayingVectorControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A vector control strategy that is realized by spraying chemicals in a place to kill individuals of the vector population.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#VectorControlMeasure_vectorTaxonId apollo.tmp#VectorControlMeasure apollo.tmp#IndoorResidualSprayingVectorControlMeasure_coverRadius apollo.tmp#IndoorResidualSprayingVectorControlMeasure_fractionOfVectorIndividualsAffected
Type extension of tns:VectorControlMeasure
Type hierarchy
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:coverRadius, tns:description, tns:fractionOfVectorIndividualsAffected, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:vectorTaxonId
Source
 
<complexType name="IndoorResidualSprayingVectorControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000391">
  <annotation>
    <documentation>A vector control strategy that is realized by spraying chemicals in a place to kill individuals of the vector population.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:VectorControlMeasure">
      <sequence>
        <element name="coverRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000459" type="tns:Distance" maxOccurs="1" minOccurs="0"/>
        <element name="fractionOfVectorIndividualsAffected" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000437" type="tns:Fraction" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A measurement datum that is the fraction of a particular adult vector population that have undergone 1) infection acquisition with a pathogen, and 2) have experienced some outcome of the resulting infection.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ContainerReductionControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A vector control strategy for mosquitoes that is realized by reducing the number of water-containing vessels in which mosquitoes can lay eggs.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#VectorControlMeasure_vectorTaxonId apollo.tmp#VectorControlMeasure apollo.tmp#ContainerReductionControlMeasure_coverRadius apollo.tmp#ContainerReductionControlMeasure_fractionReductionOfEggs apollo.tmp#ContainerReductionControlMeasure_fractionReductionOfLarvae
Type extension of tns:VectorControlMeasure
Type hierarchy
Model
Children tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:coverRadius, tns:description, tns:fractionReductionOfEggs, tns:fractionReductionOfLarvae, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:vectorTaxonId
Source
 
<complexType name="ContainerReductionControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000392">
  <annotation>
    <documentation>A vector control strategy for mosquitoes that is realized by reducing the number of water-containing vessels in which mosquitoes can lay eggs.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:VectorControlMeasure">
      <sequence>
        <element name="coverRadius" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000459" type="tns:Distance" maxOccurs="1" minOccurs="1"/>
        <element name="fractionReductionOfEggs" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000438" type="tns:Fraction" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A measurement datum that is the fraction of eggs laid by a particular host population that has been destroyed and thus will not develop into a new member of the population.</documentation>
          </annotation>
        </element>
        <element name="fractionReductionOfLarvae" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000439" type="tns:Fraction" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A measurement datum that is the fraction of the larval subpopulation of a particular host population that has died due to some event in the population (e.g, due to a particular control measure).</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DecolonizationControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
an indivdiual treatment control strategy that prevents infectious disease by treating indivdiuals colonized with a pathogen of a particular species to limit or end the colonization
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#IndividualTreatmentControlMeasure_pathogen apollo.tmp#IndividualTreatmentControlMeasure_taxonOfTreatedIndividual apollo.tmp#IndividualTreatmentControlMeasure_individualTreatment apollo.tmp#IndividualTreatmentControlMeasure_populationTreatmentCensus apollo.tmp#IndividualTreatmentControlMeasure_compliance apollo.tmp#IndividualTreatmentControlMeasure_delayFromSymptomsToTreatment apollo.tmp#IndividualTreatmentControlMeasure_treatmentSystemLogistics apollo.tmp#IndividualTreatmentControlMeasure_targetPopulationsAndPrioritizations apollo.tmp#IndividualTreatmentControlMeasure apollo.tmp#DecolonizationControlMeasure_relapseProbability apollo.tmp#DecolonizationControlMeasure_relapseInterval
Type extension of tns:IndividualTreatmentControlMeasure
Type hierarchy
Model
Children tns:compliance, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:delayFromSymptomsToTreatment, tns:description, tns:individualTreatment, tns:location, tns:logisticalSystems, tns:pathogen, tns:populationTreatmentCensus, tns:referenceId, tns:relapseInterval, tns:relapseProbability, tns:targetPopulationsAndPrioritizations, tns:taxonOfTreatedIndividual, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware, tns:treatmentSystemLogistics
Source
 
<complexType name="DecolonizationControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000333">
  <annotation>
    <documentation>an indivdiual treatment control strategy that prevents infectious disease by treating indivdiuals colonized with a pathogen of a particular species to limit or end the colonization</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:IndividualTreatmentControlMeasure">
      <sequence>
        <element name="relapseProbability" type="tns:Probability" maxOccurs="1" minOccurs="1">
        </element>
        <element name="relapseInterval" type="string"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:TravelRestrictionControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A travel-related infectious disease control strategy whose action specification is realized in restricting travel of organims from one ecosystem to another ecosystem
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#TravelRestrictionControlMeasure_maximumTravelDistanceInKm apollo.tmp#TravelRestrictionControlMeasure_compliance
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Model
Children tns:compliance, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:maximumTravelDistanceInKm, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Source
 
<complexType name="TravelRestrictionControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000231">
  <annotation>
    <documentation>A travel-related infectious disease control strategy whose action specification is realized in restricting travel of organims from one ecosystem to another ecosystem</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="maximumTravelDistanceInKm" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000289" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
        </element>
        <element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:SimulatorTimeRange
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SimulatorTimeRange_lowerBound apollo.tmp#SimulatorTimeRange_upperBound
Model
Children tns:lowerBound, tns:upperBound
Source
 
<complexType name="SimulatorTimeRange">
  <sequence>
    <element name="lowerBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000436" type="nonNegativeInteger"/>
    <element name="upperBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000447" type="nonNegativeInteger"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:TimeDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TimeDefinition_simulatorTime apollo.tmp#TimeDefinition_dateTime
Model
Children tns:dateTime, tns:simulatorTime
Source
 
<complexType name="TimeDefinition">
  <sequence>
    <element name="simulatorTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000069" type="int" maxOccurs="1" minOccurs="1"/>
    <element name="dateTime" type="dateTime" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:BioticEcosystem
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The biotic ecosystem is the sum total of all organism populations in a particular geographical region.
Diagram
Diagram
Used by
Source
 
<complexType name="BioticEcosystem" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000104">
  <annotation>
    <documentation>The biotic ecosystem is the sum total of all organism populations in a particular geographical region.</documentation>
  </annotation>
</complexType>
[ top ]
Complex Type tns:AbioticEcosystem
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The abiotic ecosystem is the sum total of all continuants in a geographical region that are not organisms, parts of organisms, or dependent continuants that inhere in organisms.
Diagram
Diagram
Used by
Source
 
<complexType name="AbioticEcosystem" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000100">
  <annotation>
    <documentation>The abiotic ecosystem is the sum total of all continuants in a geographical region that are not organisms, parts of organisms, or dependent continuants that inhere in organisms.</documentation>
  </annotation>
</complexType>
[ top ]
Complex Type tns:BioticEcosystemData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#BioticEcosystem apollo.tmp#BioticEcosystemData_populations apollo.tmp#BioticEcosystemData_households
Type extension of tns:BioticEcosystem
Type hierarchy
Model
Children tns:households, tns:populations
Source
 
<complexType name="BioticEcosystemData">
  <complexContent>
    <extension base="tns:BioticEcosystem">
      <sequence>
        <element name="populations" type="tns:Census" maxOccurs="unbounded" minOccurs="1"/>
        <element name="households" type="string" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:Ecosystem
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The sum of all biotic and abiotic entities in a geographical region.
Diagram
Diagram
Source
 
<complexType name="Ecosystem" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000097">
  <annotation>
    <documentation>The sum of all biotic and abiotic entities in a geographical region.</documentation>
  </annotation>
</complexType>
[ top ]
Complex Type tns:SyntheticEcosystem
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data set that represents 1) one or more collections of organisms at some time and some geographical region; and optionally 2) the school facilities, workplace facilities, and health care facilities in that region.
Diagram
Diagram apollo.tmp#SyntheticEcosystem_date apollo.tmp#SyntheticEcosystem_location apollo.tmp#SyntheticEcosystem_populations apollo.tmp#SyntheticEcosystem_schools apollo.tmp#SyntheticEcosystem_workplaces apollo.tmp#SyntheticEcosystem_healthcareFacilities
Model
Children tns:date, tns:healthcareFacilities, tns:location, tns:populations, tns:schools, tns:workplaces
Source
 
<complexType name="SyntheticEcosystem" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000528">
  <annotation>
    <documentation>A data set that represents 1) one or more collections of organisms at some time and some geographical region; and optionally 2) the school facilities, workplace facilities, and health care facilities in that region.</documentation>
  </annotation>
  <sequence>
    <element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="dateTime" maxOccurs="1" minOccurs="1"/>
    <element name="location" type="tns:Location" maxOccurs="1" minOccurs="1"/>
    <element name="populations" type="string" maxOccurs="unbounded" minOccurs="1"/>
    <element name="schools" type="tns:SchoolFacility" maxOccurs="unbounded" minOccurs="0"/>
    <element name="workplaces" type="tns:Facility" maxOccurs="unbounded" minOccurs="0"/>
    <element name="healthcareFacilities" type="tns:HealthcareFacilities" maxOccurs="unbounded" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:SchoolFacility
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A facility that is run by a school organization and is the bearer of a school function.
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType apollo.tmp#Facility apollo.tmp#SchoolFacility_numberOfStudents apollo.tmp#SchoolFacility_units
Type extension of tns:Facility
Type hierarchy
Used by
Model
Children tns:facilityId, tns:facilityType, tns:numberOfStudents, tns:units
Source
 
<complexType name="SchoolFacility" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000064">
  <annotation>
    <documentation>A facility that is run by a school organization and is the bearer of a school function.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Facility">
      <sequence>
        <element name="numberOfStudents" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
        <element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:Facility
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType
Used by
Model
Children tns:facilityId, tns:facilityType
Source
 
<complexType name="Facility">
  <sequence>
    <element name="facilityId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000508" type="tns:FacilityId" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An identifier that denotes some architectural structure.</documentation>
      </annotation>
    </element>
    <element name="facilityType" type="tns:FacilityTypeEnum" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:FacilityId
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An identifier that denotes some architectural structure.
Diagram
Diagram
Type string
Used by
Source
 
<simpleType name="FacilityId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000508">
  <annotation>
    <documentation>An identifier that denotes some architectural structure.</documentation>
  </annotation>
  <restriction base="string"/>
</simpleType>
[ top ]
Simple Type tns:FacilityTypeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration hospital
enumeration longTermCareFacility
Used by
Source
 
<simpleType name="FacilityTypeEnum">
  <restriction base="string">
    <enumeration value="hospital"/>
    <enumeration value="longTermCareFacility"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:Unit
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Unit_unitId apollo.tmp#Unit_unitType apollo.tmp#Unit_numberOfBeds apollo.tmp#Unit_averageLengthOfStay
Used by
Model
Children tns:averageLengthOfStay, tns:numberOfBeds, tns:unitId, tns:unitType
Source
 
<complexType name="Unit">
  <sequence>
    <element name="unitId" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000003" type="string" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure.</documentation>
      </annotation>
    </element>
    <element name="unitType" type="tns:UnitEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="numberOfBeds" type="positiveInteger" maxOccurs="1" minOccurs="0">
    </element>
    <element name="averageLengthOfStay" type="tns:Duration" maxOccurs="1" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:UnitEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of token
Facets
enumeration icu
enumeration ward
Used by
Source
 
<simpleType name="UnitEnum">
  <restriction base="token">
    <enumeration value="icu"/>
    <enumeration value="ward"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:HealthcareFacilities
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#HealthcareFacilities_healthcareFacilities
Used by
Model
Children tns:healthcareFacilities
Source
 
<complexType name="HealthcareFacilities">
  <sequence>
    <element name="healthcareFacilities" type="tns:HealthcareFacility" maxOccurs="unbounded" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:HealthcareFacility
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A facility that is run by a hospital organization and is the bearer of a hospital function.
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType apollo.tmp#Facility apollo.tmp#HealthcareFacility_numberOfBeds apollo.tmp#HealthcareFacility_fractionOfPatientsDischargedToHome apollo.tmp#HealthcareFacility_dischargePaths apollo.tmp#HealthcareFacility_dischargeDestinations apollo.tmp#HealthcareFacility_units
Type extension of tns:Facility
Type hierarchy
Used by
Model
Children tns:dischargeDestinations, tns:dischargePaths, tns:facilityId, tns:facilityType, tns:fractionOfPatientsDischargedToHome, tns:numberOfBeds, tns:units
Source
 
<complexType name="HealthcareFacility" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000063">
  <annotation>
    <documentation>A facility that is run by a hospital organization and is the bearer of a hospital function.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:Facility">
      <sequence>
        <element name="numberOfBeds" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
        <element name="fractionOfPatientsDischargedToHome" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
        <element name="dischargePaths" type="tns:DischargePathAndProbability" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="dischargeDestinations" type="tns:DischargeDestinationAndProbability" maxOccurs="unbounded" minOccurs="0"/>
        <element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DischargePathAndProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DischargePathAndProbability_dischargePath apollo.tmp#DischargePathAndProbability_readmissionDelayInDays apollo.tmp#DischargePathAndProbability_probability
Used by
Model
Children tns:dischargePath, tns:probability, tns:readmissionDelayInDays
Source
 
<complexType name="DischargePathAndProbability">
  <sequence>
    <element name="dischargePath" type="tns:DischargePathEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="readmissionDelayInDays" type="tns:Duration" maxOccurs="1" minOccurs="0">
    </element>
    <element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:DischargePathEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration dischargeToCommunityReadmitToHospital
enumeration dischargeToCommunity
enumeration dischargeToNursingHomeThenDischargeToCommunity
enumeration dischargeToNursingHomeThenReadmitToHospital
Used by
Source
 
<simpleType name="DischargePathEnum">
  <restriction base="string">
    <enumeration value="dischargeToCommunityReadmitToHospital"/>
    <enumeration value="dischargeToCommunity"/>
    <enumeration value="dischargeToNursingHomeThenDischargeToCommunity"/>
    <enumeration value="dischargeToNursingHomeThenReadmitToHospital"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:DischargeDestinationAndProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DischargeDestinationAndProbability_dischargeDestination apollo.tmp#DischargeDestinationAndProbability_probability
Used by
Model
Children tns:dischargeDestination, tns:probability
Source
 
<complexType name="DischargeDestinationAndProbability">
  <sequence>
    <element name="dischargeDestination" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="probability" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ChickenProductionFacility
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Facility_facilityId apollo.tmp#Facility_facilityType apollo.tmp#Facility apollo.tmp#ChickenProductionFacility_capacity apollo.tmp#ChickenProductionFacility_units
Type extension of tns:Facility
Type hierarchy
Model
Children tns:capacity, tns:facilityId, tns:facilityType, tns:units
Source
 
<complexType name="ChickenProductionFacility">
  <complexContent>
    <extension base="tns:Facility">
      <sequence>
        <element name="capacity" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
        <element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:Households
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="Households"/>
[ top ]
Complex Type tns:HouseholdsData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Households apollo.tmp#HouseholdsData_households
Type extension of tns:Households
Type hierarchy
Model
Children tns:households
Source
 
<complexType name="HouseholdsData">
  <complexContent>
    <extension base="tns:Households">
      <sequence>
        <element name="households" type="token" maxOccurs="unbounded" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:HouseholdsPointerToData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Households apollo.tmp#HouseholdsPointerToData_url
Type extension of tns:Households
Type hierarchy
Model
Children tns:url
Source
 
<complexType name="HouseholdsPointerToData">
  <complexContent>
    <extension base="tns:Households">
      <sequence>
        <element name="url" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMIABIS_0000019" type="anyURI" maxOccurs="unbounded" minOccurs="0">
          <annotation>
            <documentation>A CRID that constitutes a reference to an Internet resource.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:AbioticEcosystemData
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#AbioticEcosystem apollo.tmp#AbioticEcosystemData_schools apollo.tmp#AbioticEcosystemData_workplaces apollo.tmp#AbioticEcosystemData_houses apollo.tmp#AbioticEcosystemData_healthcareFacilities
Type extension of tns:AbioticEcosystem
Type hierarchy
Model
Children tns:healthcareFacilities, tns:houses, tns:schools, tns:workplaces
Source
 
<complexType name="AbioticEcosystemData">
  <complexContent>
    <extension base="tns:AbioticEcosystem">
      <sequence>
        <element name="schools" type="tns:SchoolFacility" maxOccurs="unbounded" minOccurs="0"/>
        <element name="workplaces" type="token" maxOccurs="unbounded" minOccurs="0"/>
        <element name="houses" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000074" type="string" maxOccurs="unbounded" minOccurs="0">
          <annotation>
            <documentation>A material entity that has as parts one or more sites large enough to contain humans, has as part one or more material entities that separates it from other sites, and bears a residence function.</documentation>
          </annotation>
        </element>
        <element name="healthcareFacilities" type="tns:HealthcareFacility" maxOccurs="unbounded" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:NamedMultiGeometry
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#NamedMultiGeometry_polygons apollo.tmp#NamedMultiGeometry_apolloLocationCode apollo.tmp#NamedMultiGeometry_textualDescription
Used by
Model
Children tns:apolloLocationCode, tns:polygons, tns:textualDescription
Source
 
<complexType name="NamedMultiGeometry">
  <!-- <complexContent> <extension base="tns:MultiGeometry"> -->
  <sequence>
    <element name="polygons" type="tns:LocationPolygon" maxOccurs="unbounded" minOccurs="1"/>
    <choice>
      <element name="apolloLocationCode" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000259" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
      <element name="textualDescription" type="string" maxOccurs="1" minOccurs="1"/>
    </choice>
  </sequence>
  <!-- </extension> </complexContent> -->
</complexType>
[ top ]
Simple Type tns:ApolloIndexableItemTypeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration InfectionType
enumeration InfectionAcquisitionType
enumeration InfectiousDiseaseType
enumeration InfectiousDiseaseControlMeasureType
enumeration InfectiousDiseaseScenarioType
enumeration ContaminationType
enumeration ContaminatedThingCensusType
enumeration PopulationAndEnvironmentCensusType
enumeration PopulationInfectionImmunityCensusType
enumeration PopulationTreatmentCensusType
enumeration VaccinationType
enumeration AntiviralTreatmentType
enumeration EpidemicType
Source
 
<simpleType name="ApolloIndexableItemTypeEnum">
  <restriction base="string">
    <enumeration value="InfectionType"/>
    <enumeration value="InfectionAcquisitionType"/>
    <enumeration value="InfectiousDiseaseType"/>
    <enumeration value="InfectiousDiseaseControlMeasureType"/>
    <enumeration value="InfectiousDiseaseScenarioType"/>
    <enumeration value="ContaminationType"/>
    <enumeration value="ContaminatedThingCensusType"/>
    <enumeration value="PopulationAndEnvironmentCensusType"/>
    <enumeration value="PopulationInfectionImmunityCensusType"/>
    <enumeration value="PopulationTreatmentCensusType"/>
    <enumeration value="VaccinationType"/>
    <enumeration value="AntiviralTreatmentType"/>
    <enumeration value="EpidemicType"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:Epidemic
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A process whose beginning is demarcated by accelerating infection acquisition by one or more host species of a particular pathogen in a particular location and whose end is demarcated by the time when the rate of infection acquisition becomes constant.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#Epidemic_causalPathogens apollo.tmp#Epidemic_epidemicPeriod apollo.tmp#Epidemic_administrativeLocations apollo.tmp#Epidemic_epidemicZones apollo.tmp#Epidemic_infections apollo.tmp#Epidemic_preEpidemicCensus apollo.tmp#Epidemic_populationSerologySurveys apollo.tmp#Epidemic_populationInfectionSurveys apollo.tmp#Epidemic_infectiousDiseaseControlStrategies apollo.tmp#Epidemic_caseDefinitions apollo.tmp#Epidemic_contactDefinitions apollo.tmp#Epidemic_caseLists apollo.tmp#Epidemic_epidemicCaseCounts apollo.tmp#Epidemic_transmissionTrees apollo.tmp#Epidemic_relativeRiskDataSets apollo.tmp#Epidemic_causalPathogenIsolates apollo.tmp#Epidemic_references apollo.tmp#Epidemic_curator apollo.tmp#Epidemic_editHistory apollo.tmp#Epidemic_reviewedBy apollo.tmp#Epidemic_acknowledgements
Type extension of tns:ApolloIndexableItem
Type hierarchy
Model
Children tns:acknowledgements, tns:administrativeLocations, tns:caseDefinitions, tns:caseLists, tns:causalPathogenIsolates, tns:causalPathogens, tns:contactDefinitions, tns:curator, tns:editHistory, tns:epidemicCaseCounts, tns:epidemicPeriod, tns:epidemicZones, tns:infections, tns:infectiousDiseaseControlStrategies, tns:populationInfectionSurveys, tns:populationSerologySurveys, tns:preEpidemicCensus, tns:references, tns:relativeRiskDataSets, tns:reviewedBy, tns:transmissionTrees
Source
 
<complexType name="Epidemic" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000298">
  <annotation>
    <documentation>A process whose beginning is demarcated by accelerating infection acquisition by one or more host species of a particular pathogen in a particular location and whose end is demarcated by the time when the rate of infection acquisition becomes constant.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="causalPathogens" type="tns:ApolloPathogenCode" maxOccurs="unbounded" minOccurs="1"/>
        <element name="epidemicPeriod" type="tns:EpidemicPeriod" maxOccurs="1" minOccurs="1">
        </element>
        <element name="administrativeLocations" sawsdl:modelReference="http://purl.obolibrary.org/obo/GEO_000000005" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="1"/>
        <element name="epidemicZones" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="infections" type="tns:Infection" maxOccurs="unbounded" minOccurs="1"/>
        <element name="preEpidemicCensus" type="tns:PreEpidemicEcosystemCensus" maxOccurs="1" minOccurs="0"/>
        <element name="populationSerologySurveys" type="tns:PopulationSerologySurvey" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="populationInfectionSurveys" type="tns:PopulationInfectionSurvey" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="infectiousDiseaseControlStrategies" type="tns:InfectiousDiseaseControlMeasure" maxOccurs="unbounded" minOccurs="0"/>
        <element name="caseDefinitions" type="tns:CaseDefinition" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="contactDefinitions" type="tns:ContactDefinition" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="caseLists" type="tns:CaseList" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="epidemicCaseCounts" type="tns:EpidemicCaseCounts" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="transmissionTrees" type="tns:TransmissionTree" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="relativeRiskDataSets" type="tns:RelativeRiskDataSet" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="causalPathogenIsolates" type="token" maxOccurs="unbounded" minOccurs="0"/>
        <element name="references" type="tns:Reference" maxOccurs="unbounded" minOccurs="1">
        </element>
        <element name="curator" type="string" maxOccurs="1" minOccurs="0">
        </element>
        <element name="editHistory" type="string" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="reviewedBy" type="string" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="acknowledgements" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000324" type="string" maxOccurs="unbounded" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:EpidemicPeriod
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
The temporal interval occupied by an epidemic.
Diagram
Diagram apollo.tmp#EpidemicPeriod_startDate apollo.tmp#EpidemicPeriod_startDateDefinition apollo.tmp#EpidemicPeriod_startDateReferenceId apollo.tmp#EpidemicPeriod_endDate apollo.tmp#EpidemicPeriod_endDateDefinition apollo.tmp#EpidemicPeriod_endDateReferenceId
Used by
Model
Children tns:endDate, tns:endDateDefinition, tns:endDateReferenceId, tns:startDate, tns:startDateDefinition, tns:startDateReferenceId
Source
 
<complexType name="EpidemicPeriod" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000400">
  <annotation>
    <documentation>The temporal interval occupied by an epidemic.</documentation>
  </annotation>
  <sequence>
    <element name="startDate" type="date" maxOccurs="1" minOccurs="1"/>
    <element name="startDateDefinition" type="tns:EpidemicPeriodStartDefinitionEnum" maxOccurs="1" minOccurs="1"/>
    <element name="startDateReferenceId" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
    <element name="endDate" type="date" maxOccurs="1" minOccurs="0"/>
    <element name="endDateDefinition" type="tns:EpidemicPeriodEndDefinitionEnum" maxOccurs="1" minOccurs="0"/>
    <element name="endDateReferenceId" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:EpidemicPeriodStartDefinitionEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration symptomOnsetFirstCase
enumeration firstReportedCase
enumeration dateOfFirstCaseFatality
enumeration firstLabCaseConfirmation
enumeration administrativeDeclaration
Used by
Source
 
<simpleType name="EpidemicPeriodStartDefinitionEnum">
  <restriction base="string">
    <enumeration value="symptomOnsetFirstCase"/>
    <enumeration value="firstReportedCase"/>
    <enumeration value="dateOfFirstCaseFatality"/>
    <enumeration value="firstLabCaseConfirmation"/>
    <enumeration value="administrativeDeclaration"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:EpidemicPeriodEndDefinitionEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration symptomOnsetLastCase
enumeration hospitalizationLastCase
enumeration deathOfLastCase
enumeration administrativeDeclaration
enumeration lastLabCaseConfirmation
enumeration FortyTwoDaysAfterLastConfirmedCaseTestedNegativeTwice
Used by
Source
 
<simpleType name="EpidemicPeriodEndDefinitionEnum">
  <restriction base="string">
    <enumeration value="symptomOnsetLastCase"/>
    <enumeration value="hospitalizationLastCase"/>
    <enumeration value="deathOfLastCase"/>
    <enumeration value="administrativeDeclaration"/>
    <enumeration value="lastLabCaseConfirmation"/>
    <enumeration value="FortyTwoDaysAfterLastConfirmedCaseTestedNegativeTwice"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:PreEpidemicEcosystemCensus
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PreEpidemicEcosystemCensus_nameOfAdministrativeUnit apollo.tmp#PreEpidemicEcosystemCensus_numberOfPeople apollo.tmp#PreEpidemicEcosystemCensus_numberOfHouseholds apollo.tmp#PreEpidemicEcosystemCensus_numberOfSchools apollo.tmp#PreEpidemicEcosystemCensus_numberOfWorkplaces apollo.tmp#PreEpidemicEcosystemCensus_additionalDescription apollo.tmp#PreEpidemicEcosystemCensus_subLocationCensuses apollo.tmp#PreEpidemicEcosystemCensus_referenceId
Used by
Model
Children tns:additionalDescription, tns:nameOfAdministrativeUnit, tns:numberOfHouseholds, tns:numberOfPeople, tns:numberOfSchools, tns:numberOfWorkplaces, tns:referenceId, tns:subLocationCensuses
Source
 
<complexType name="PreEpidemicEcosystemCensus">
  <sequence>
    <element name="nameOfAdministrativeUnit" type="token" maxOccurs="1" minOccurs="0"/>
    <element name="numberOfPeople" type="integer" maxOccurs="1" minOccurs="1"/>
    <element name="numberOfHouseholds" type="integer" maxOccurs="1" minOccurs="0"/>
    <element name="numberOfSchools" type="integer" maxOccurs="1" minOccurs="0"/>
    <element name="numberOfWorkplaces" type="integer" maxOccurs="1" minOccurs="0"/>
    <element name="additionalDescription" type="string" maxOccurs="1" minOccurs="0"/>
    <element name="subLocationCensuses" type="tns:PreEpidemicEcosystemCensus" maxOccurs="unbounded" minOccurs="0"/>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:PopulationSerologySurvey
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A population survey that assesses the presence (plus or minus quantity) of antibody to a particular antigen in individuals in a population.
Diagram
Diagram apollo.tmp#PopulationSerologySurvey_speciesSampled apollo.tmp#PopulationSerologySurvey_speciesSampledNcbiTaxonId apollo.tmp#PopulationSerologySurvey_numberSampled apollo.tmp#PopulationSerologySurvey_whereSampled apollo.tmp#PopulationSerologySurvey_testName apollo.tmp#PopulationSerologySurvey_testLoincId apollo.tmp#PopulationSerologySurvey_numberOfSamplesPositive apollo.tmp#PopulationSerologySurvey_referenceId
Used by
Model
Children tns:numberOfSamplesPositive, tns:numberSampled, tns:referenceId, tns:speciesSampled, tns:speciesSampledNcbiTaxonId, tns:testLoincId, tns:testName, tns:whereSampled
Source
 
<complexType name="PopulationSerologySurvey" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000396">
  <annotation>
    <documentation>A population survey that assesses the presence (plus or minus quantity) of antibody to a particular antigen in individuals in a population.</documentation>
  </annotation>
  <sequence>
    <element name="speciesSampled" type="token" maxOccurs="1" minOccurs="1"/>
    <element name="speciesSampledNcbiTaxonId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
    <element name="numberSampled" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
    <element name="whereSampled" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000520" type="token" maxOccurs="1" minOccurs="0"/>
    <element name="testName" type="token" maxOccurs="1" minOccurs="0"/>
    <element name="testLoincId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000494" type="tns:LoincId" maxOccurs="1" minOccurs="0"/>
    <element name="numberOfSamplesPositive" type="token" maxOccurs="1" minOccurs="0"/>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:PopulationInfectionSurvey
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A population survey that counts the number of individuals in the population who are infected with a particular pathogen.
Diagram
Diagram apollo.tmp#PopulationInfectionSurvey_speciesSampled apollo.tmp#PopulationInfectionSurvey_speciesSampledNcbiTaxonId apollo.tmp#PopulationInfectionSurvey_numberSampled apollo.tmp#PopulationInfectionSurvey_whereSampled apollo.tmp#PopulationInfectionSurvey_testName apollo.tmp#PopulationInfectionSurvey_testLoincId apollo.tmp#PopulationInfectionSurvey_numberOfSamplesPositive apollo.tmp#PopulationInfectionSurvey_referenceId
Used by
Model
Children tns:numberOfSamplesPositive, tns:numberSampled, tns:referenceId, tns:speciesSampled, tns:speciesSampledNcbiTaxonId, tns:testLoincId, tns:testName, tns:whereSampled
Source
 
<complexType name="PopulationInfectionSurvey" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000155">
  <annotation>
    <documentation>A population survey that counts the number of individuals in the population who are infected with a particular pathogen.</documentation>
  </annotation>
  <sequence>
    <element name="speciesSampled" type="token" maxOccurs="1" minOccurs="1"/>
    <element name="speciesSampledNcbiTaxonId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
    <element name="numberSampled" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
    <element name="whereSampled" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000520" type="token" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>A geographic region that contains a sampling process.</documentation>
      </annotation>
    </element>
    <element name="testName" type="token" maxOccurs="1" minOccurs="0"/>
    <element name="testLoincId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000494" type="tns:LoincId" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>A LOINC identifier that refers to some clinical laboratory test conducted in a particular context..</documentation>
      </annotation>
    </element>
    <element name="numberOfSamplesPositive" type="token" maxOccurs="1" minOccurs="0"/>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CaseDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies the criteria that an organism must meet to be considered to be in some abnormal state.
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#CaseDefinition_apolloLabel apollo.tmp#CaseDefinition_investigationLabel apollo.tmp#CaseDefinition_investigationDefinition apollo.tmp#CaseDefinition_referenceId
Type extension of tns:CategoryDefinition
Type hierarchy
Used by
Model
Children tns:apolloLabel, tns:investigationDefinition, tns:investigationLabel, tns:referenceId
Source
 
<complexType name="CaseDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000296">
  <annotation>
    <documentation>An information content entity that specifies the criteria that an organism must meet to be considered to be in some abnormal state.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="apolloLabel" type="tns:CaseDefinitionEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="investigationLabel" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001628" type="token" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A CRID symbol used to identify an investigation.</documentation>
          </annotation>
        </element>
        <element name="investigationDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/OBI_0001615" type="token" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A textual entity that describes an investigation.</documentation>
          </annotation>
        </element>
        <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:CaseDefinitionEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration case
enumeration confirmedCase
enumeration probableCase
enumeration suspectedCase
enumeration neonatalCase
enumeration epidemiologicallyLinkedCase
enumeration fatalCase
enumeration alertCase
enumeration autochthonousCase
enumeration importedCase
Used by
Source
 
<simpleType name="CaseDefinitionEnum">
  <restriction base="string">
    <enumeration value="case"/>
    <enumeration value="confirmedCase"/>
    <enumeration value="probableCase"/>
    <enumeration value="suspectedCase"/>
    <enumeration value="neonatalCase"/>
    <enumeration value="epidemiologicallyLinkedCase"/>
    <enumeration value="fatalCase"/>
    <enumeration value="alertCase"/>
    <enumeration value="autochthonousCase"/>
    <enumeration value="importedCase"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:CaseList
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data set that is a collection of case records.
Diagram
Diagram apollo.tmp#CaseList_speciesOfCases apollo.tmp#CaseList_caseRecords
Used by
Model
Children tns:caseRecords, tns:speciesOfCases
Source
 
<complexType name="CaseList" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000397">
  <annotation>
    <documentation>A data set that is a collection of case records.</documentation>
  </annotation>
  <sequence>
    <element name="speciesOfCases" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
    </element>
    <element name="caseRecords" type="tns:CaseRecord" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CaseRecord
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data set whose data items are about a host and its participation in an infection and potentially other activities occuring in the same time interval as the infection.
Diagram
Diagram apollo.tmp#CaseRecord_caseId apollo.tmp#CaseRecord_ageInYears apollo.tmp#CaseRecord_sex apollo.tmp#CaseRecord_race apollo.tmp#CaseRecord_occupations apollo.tmp#CaseRecord_placesVisitedWhileSusceptibleOrInfectious apollo.tmp#CaseRecord_infectionAcquiredFromCaseId apollo.tmp#CaseRecord_diseaseOutcomesWithLocationDateTime apollo.tmp#CaseRecord_labTestsAndResults apollo.tmp#CaseRecord_pathogenGeneSequence apollo.tmp#CaseRecord_references apollo.tmp#CaseRecord_caseClassification apollo.tmp#CaseRecord_location apollo.tmp#CaseRecord_caseDefinition apollo.tmp#CaseRecord_causalPathogen apollo.tmp#CaseRecord_treatment apollo.tmp#CaseRecord_infectionSource apollo.tmp#CaseRecord_controlMeasures
Used by
Model
Children tns:ageInYears, tns:caseClassification, tns:caseDefinition, tns:caseId, tns:causalPathogen, tns:controlMeasures, tns:diseaseOutcomesWithLocationDateTime, tns:infectionAcquiredFromCaseId, tns:infectionSource, tns:labTestsAndResults, tns:location, tns:occupations, tns:pathogenGeneSequence, tns:placesVisitedWhileSusceptibleOrInfectious, tns:race, tns:references, tns:sex, tns:treatment
Source
 
<complexType name="CaseRecord" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000398">
  <annotation>
    <documentation>A data set whose data items are about a host and its participation in an infection and potentially other activities occuring in the same time interval as the infection.</documentation>
  </annotation>
  <sequence>
    <element name="caseId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000510" type="token" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An identifier that denotes an organism included in some infection case count.</documentation>
      </annotation>
    </element>
    <element name="ageInYears" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000504" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>A time measurement datum that refers to the temporal interval occupied by the life course of some organism and that takes 'years' as its measurement unit label.</documentation>
      </annotation>
    </element>
    <element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="0"/>
    <element name="race" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000098" type="string" maxOccurs="unbounded" minOccurs="0">
      <annotation>
        <documentation>A racial identity is an information content entity that is the output of some racial identitification process and is intended to be a truthful statement about the genetic or cultural race of a person. Unlike data items they are not necessilary contributed or acquired by a reliable method.</documentation>
      </annotation>
    </element>
    <element name="occupations" type="tns:OccupationEnum" maxOccurs="unbounded" minOccurs="0"/>
    <element name="placesVisitedWhileSusceptibleOrInfectious" type="tns:PlaceVisited" maxOccurs="unbounded" minOccurs="0"/>
    <element name="infectionAcquiredFromCaseId" type="token" maxOccurs="1" minOccurs="0"/>
    <element name="diseaseOutcomesWithLocationDateTime" type="tns:DiseaseOutcomeWithLocationDateTime" maxOccurs="unbounded" minOccurs="0"/>
    <element name="labTestsAndResults" type="tns:LabTestAndResult" maxOccurs="unbounded" minOccurs="0"/>
    <element name="pathogenGeneSequence" type="string" maxOccurs="1" minOccurs="0"/>
    <element name="references" type="tns:Reference" maxOccurs="unbounded" minOccurs="0"/>
    <!-- New elements added for Rabies case records -->
    <!-- New elements added for Rabies case records -->
    <element name="caseClassification" type="string" maxOccurs="1" minOccurs="0"/>
    <element name="location" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="0"/>
    <element name="caseDefinition" type="tns:CaseDefinition" maxOccurs="1" minOccurs="0"/>
    <element name="causalPathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="0"/>
    <element name="treatment" type="tns:Treatment" maxOccurs="unbounded" minOccurs="0"/>
    <element name="infectionSource" type="tns:InfectionSource" maxOccurs="unbounded" minOccurs="0"/>
    <element name="controlMeasures" type="tns:InfectiousDiseaseControlMeasure" maxOccurs="unbounded" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:OccupationEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration storekeeper
enumeration merchant
enumeration nurse
enumeration hospitalMessenger
Used by
Source
 
<simpleType name="OccupationEnum">
  <restriction base="string">
    <enumeration value="storekeeper"/>
    <enumeration value="merchant"/>
    <enumeration value="nurse"/>
    <enumeration value="hospitalMessenger"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:PlaceVisited
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#PlaceVisited_place apollo.tmp#PlaceVisited_namedMultiGeometry apollo.tmp#PlaceVisited_frequencyOfVisits apollo.tmp#PlaceVisited_datesOfVisits apollo.tmp#PlaceVisited_realDateSpansOfVisits apollo.tmp#PlaceVisited_realTimeSpansOfVisits
Used by
Model
Children tns:datesOfVisits, tns:frequencyOfVisits, tns:namedMultiGeometry, tns:place, tns:realDateSpansOfVisits, tns:realTimeSpansOfVisits
Source
 
<complexType name="PlaceVisited">
  <sequence>
    <choice>
      <element name="place" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000062" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1">
      </element>
      <element name="namedMultiGeometry" type="tns:NamedMultiGeometry" maxOccurs="1" minOccurs="1"/>
    </choice>
    <choice>
      <element name="frequencyOfVisits" type="tns:Rate" maxOccurs="1" minOccurs="0">
      </element>
      <element name="datesOfVisits" type="date" maxOccurs="unbounded" minOccurs="0">
      </element>
      <element name="realDateSpansOfVisits" type="tns:RealDateSpanCategoryDefinition" maxOccurs="unbounded" minOccurs="0">
      </element>
      <element name="realTimeSpansOfVisits" type="tns:RealTimeSpanCategoryDefinition" maxOccurs="unbounded" minOccurs="0">
      </element>
    </choice>
  </sequence>
</complexType>
[ top ]
Complex Type tns:RealDateSpanCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#RealDateSpanCategoryDefinition_offsetFromUtcInHours apollo.tmp#RealDateSpanCategoryDefinition_firstDay apollo.tmp#RealDateSpanCategoryDefinition_lastDay
Type extension of tns:CategoryDefinition
Type hierarchy
Used by
Model
Children tns:firstDay, tns:lastDay, tns:offsetFromUtcInHours
Source
 
<complexType name="RealDateSpanCategoryDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000386">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="0">
        </element>
        <element name="firstDay" type="date" maxOccurs="1" minOccurs="1">
        </element>
        <element name="lastDay" type="date" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:RealTimeSpanCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#RealTimeSpanCategoryDefinition_offsetFromUtcInHours apollo.tmp#RealTimeSpanCategoryDefinition_beginningTime apollo.tmp#RealTimeSpanCategoryDefinition_endingTime
Type extension of tns:CategoryDefinition
Type hierarchy
Used by
Model
Children tns:beginningTime, tns:endingTime, tns:offsetFromUtcInHours
Source
 
<complexType name="RealTimeSpanCategoryDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000385">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="1">
        </element>
        <element name="beginningTime" type="dateTime" maxOccurs="1" minOccurs="1">
        </element>
        <element name="endingTime" type="dateTime" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DiseaseOutcomeWithLocationDateTime
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeWithLocationDateTime_diseaseOutcome apollo.tmp#DiseaseOutcomeWithLocationDateTime_dateTime apollo.tmp#DiseaseOutcomeWithLocationDateTime_place apollo.tmp#DiseaseOutcomeWithLocationDateTime_locationCode apollo.tmp#DiseaseOutcomeWithLocationDateTime_latLongPair
Used by
Model
Children tns:dateTime, tns:diseaseOutcome, tns:latLongPair, tns:locationCode, tns:place
Source
 
<complexType name="DiseaseOutcomeWithLocationDateTime">
  <sequence>
    <element name="diseaseOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000204" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="dateTime" type="dateTime" maxOccurs="1" minOccurs="0">
    </element>
    <choice>
      <element name="place" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000062" type="tns:PlaceEnum" maxOccurs="1" minOccurs="0">
        <annotation>
          <documentation>An architectural structure that bears some function.</documentation>
        </annotation>
      </element>
      <element name="locationCode" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
      <element name="latLongPair" type="tns:LatLongPair" minOccurs="1" maxOccurs="1"/>
    </choice>
  </sequence>
</complexType>
[ top ]
Complex Type tns:LatLongPair
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data set that comprises exactly one latitude measurement datum and exactly one longitude measurement datum as its elements, and optiionally the geodetic datum used as the coordinate system for the measurements, and each of these measurements is about the same zero-dimensional geographical region.
Diagram
Diagram apollo.tmp#LatLongPair_latitutde apollo.tmp#LatLongPair_longitude
Used by
Model
Children tns:latitutde, tns:longitude
Source
 
<complexType name="LatLongPair" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000503">
  <annotation>
    <documentation>A data set that comprises exactly one latitude measurement datum and exactly one longitude measurement datum as its elements, and optiionally the geodetic datum used as the coordinate system for the measurements, and each of these measurements is about the same zero-dimensional geographical region.</documentation>
  </annotation>
  <sequence>
    <element name="latitutde" type="tns:Latitude" minOccurs="1" maxOccurs="1"/>
    <element name="longitude" type="tns:Longitude" minOccurs="1" maxOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:LabTestAndResult
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#LabTestAndResult_textualName apollo.tmp#LabTestAndResult_loincCode apollo.tmp#LabTestAndResult_sampleDate apollo.tmp#LabTestAndResult_result
Used by
Model
Children tns:loincCode, tns:result, tns:sampleDate, tns:textualName
Source
 
<complexType name="LabTestAndResult">
  <sequence>
    <choice>
      <element name="textualName" type="string" maxOccurs="1" minOccurs="1"/>
      <element name="loincCode" type="tns:LoincId" maxOccurs="1" minOccurs="1"/>
    </choice>
    <element name="sampleDate" type="dateTime" maxOccurs="1" minOccurs="0"/>
    <element name="result" type="string" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:Reference
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Reference_id apollo.tmp#Reference_title apollo.tmp#Reference_authors apollo.tmp#Reference_publication apollo.tmp#Reference_url apollo.tmp#Reference_pubMedId apollo.tmp#Reference_orcId apollo.tmp#Reference_obcIdeId
Used by
Model
Children tns:authors, tns:id, tns:obcIdeId, tns:orcId, tns:pubMedId, tns:publication, tns:title, tns:url
Source
 
<complexType name="Reference" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000301">
  <sequence>
    <element name="id" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
    <element name="title" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="authors" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000321" type="string" maxOccurs="1" minOccurs="0"/>
    <element name="publication" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000311" type="string" maxOccurs="1" minOccurs="0">
    </element>
    <element name="url" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMIABIS_0000019" type="anyURI" maxOccurs="1" minOccurs="1"/>
    <element name="pubMedId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000495" type="nonNegativeInteger" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>An identifier curated by the United States National Library of Medicine and National Institutes of Health that denotes some publication record in the MEDLINE database.</documentation>
      </annotation>
    </element>
    <element name="orcId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000496" type="string" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>An identifier curated by ORCID, Inc. to denote some academic author.</documentation>
      </annotation>
    </element>
    <element name="obcIdeId" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:InfectionSource
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionSource_infectionSourceCode apollo.tmp#InfectionSource_infectionSourceAdditionalDescription apollo.tmp#InfectionSource_infectionSourceDate
Used by
Model
Children tns:infectionSourceAdditionalDescription, tns:infectionSourceCode, tns:infectionSourceDate
Source
 
<complexType name="InfectionSource">
  <sequence>
    <element name="infectionSourceCode" type="token" maxOccurs="1" minOccurs="0"/>
    <element name="infectionSourceAdditionalDescription" type="token" maxOccurs="unbounded" minOccurs="0"/>
    <element name="infectionSourceDate" type="dateTime" maxOccurs="unbounded" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:EpidemicCaseCounts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A count of disease cases in an infected population that meet the case definition criteria within a particular epidemic interval.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#EpidemicCaseCounts_totalCaseCount apollo.tmp#EpidemicCaseCounts_totalFatalCaseCount apollo.tmp#EpidemicCaseCounts_otherCaseCounts
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:otherCaseCounts, tns:totalCaseCount, tns:totalFatalCaseCount
Source
 
<complexType name="EpidemicCaseCounts" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000498">
  <annotation>
    <documentation>A count of disease cases in an infected population that meet the case definition criteria within a particular epidemic interval.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="totalCaseCount" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000569" type="tns:CaseCount" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A data item that is the output of some infection case count.</documentation>
          </annotation>
        </element>
        <element name="totalFatalCaseCount" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000568" type="tns:CaseCount" maxOccurs="1" minOccurs="0">
          <annotation>
            <documentation>A data item that is the output of some infection case count and that represents the number of infectious disease cases that ended in death.</documentation>
          </annotation>
        </element>
        <element name="otherCaseCounts" type="tns:CaseCount" maxOccurs="unbounded" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:CaseCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A count of individuals in a population who meet the criteria of some case definition during some time interval.
Diagram
Diagram apollo.tmp#CaseCount_countTitle apollo.tmp#CaseCount_caseDefinitionsIncluded apollo.tmp#CaseCount_caseCountArrayDescription apollo.tmp#CaseCount_totalCount apollo.tmp#CaseCount_caseCountArray apollo.tmp#CaseCount_temporalCountArrayWithUniformIntervals apollo.tmp#CaseCount_referenceId
Used by
Model
Children tns:caseCountArray, tns:caseCountArrayDescription, tns:caseDefinitionsIncluded, tns:countTitle, tns:referenceId, tns:temporalCountArrayWithUniformIntervals, tns:totalCount
Source
 
<complexType name="CaseCount" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000497">
  <annotation>
    <documentation>A count of individuals in a population who meet the criteria of some case definition during some time interval.</documentation>
  </annotation>
  <sequence>
    <element name="countTitle" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="caseDefinitionsIncluded" type="tns:CaseDefinitionEnum" maxOccurs="unbounded" minOccurs="1"/>
    <element name="caseCountArrayDescription" type="tns:CaseCountArrayDescription" minOccurs="1" maxOccurs="1"/>
    <choice>
      <element name="totalCount" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
      <element name="caseCountArray" type="tns:VariableCategoryValueTree" maxOccurs="1" minOccurs="1"/>
      <element name="temporalCountArrayWithUniformIntervals" type="tns:TemporalCountArrayWithUniformIntervals" maxOccurs="1" minOccurs="1"/>
    </choice>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CaseCountArrayDescription
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseCountArrayDescription_caseCountArrayType apollo.tmp#CaseCountArrayDescription_startDateOfDataSeries apollo.tmp#CaseCountArrayDescription_resetDates apollo.tmp#CaseCountArrayDescription_dateSpansWithNoDataCollection
Used by
Model
Children tns:caseCountArrayType, tns:dateSpansWithNoDataCollection, tns:resetDates, tns:startDateOfDataSeries
Source
 
<complexType name="CaseCountArrayDescription">
  <sequence>
    <element name="caseCountArrayType" type="tns:CaseCountArrayTypeEnum" minOccurs="1" maxOccurs="1"/>
    <element name="startDateOfDataSeries" type="date" minOccurs="1" maxOccurs="1"/>
    <element name="resetDates" type="date" minOccurs="0" maxOccurs="unbounded"/>
    <element name="dateSpansWithNoDataCollection" type="tns:RealDateSpanCategoryDefinition" minOccurs="0" maxOccurs="unbounded"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:CaseCountArrayTypeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration resetTo0
enumeration resetTo0AndTurnOffDataCollection
enumeration resetTo0AndTurnBackOnDataCollection
enumeration mutuallyExclusiveWithConstantLengthIntervals
enumeration mutuallyExclusiveWithVaryingLengthIntervals
enumeration cumulativeWithoutResets
enumeration cumulativeWithResets
enumeration inconclusive
Used by
Source
 
<simpleType name="CaseCountArrayTypeEnum">
  <restriction base="string">
    <enumeration value="resetTo0"/>
    <enumeration value="resetTo0AndTurnOffDataCollection"/>
    <enumeration value="resetTo0AndTurnBackOnDataCollection"/>
    <enumeration value="mutuallyExclusiveWithConstantLengthIntervals"/>
    <enumeration value="mutuallyExclusiveWithVaryingLengthIntervals"/>
    <enumeration value="cumulativeWithoutResets"/>
    <enumeration value="cumulativeWithResets"/>
    <enumeration value="inconclusive"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:TemporalCountArrayWithUniformIntervals
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#TemporalCountArrayWithUniformIntervals_nDimensions apollo.tmp#TemporalCountArrayWithUniformIntervals_nTemporalIntervals apollo.tmp#TemporalCountArrayWithUniformIntervals_firstArrayAxis
Used by
Model
Children tns:firstArrayAxis, tns:nDimensions, tns:nTemporalIntervals
Source
 
<complexType name="TemporalCountArrayWithUniformIntervals">
  <sequence>
    <element name="nDimensions" type="positiveInteger" maxOccurs="1" minOccurs="0"/>
    <element name="nTemporalIntervals" type="string"/>
    <element name="firstArrayAxis" type="tns:CategoricalVariableNode" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:TransmissionTree
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A data structure that represents, for a particular infection in ecosystem, a subset of infected organisms and for each infected organism in the subset except the first one infected temporally, its infection acquisition from an infected host as a machine-readable link to that infected host.
Diagram
Diagram apollo.tmp#TransmissionTree_thisCase apollo.tmp#TransmissionTree_casesThisCaseInfected
Used by
Model
Children tns:casesThisCaseInfected, tns:thisCase
Source
 
<complexType name="TransmissionTree" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000403">
  <annotation>
    <documentation>A data structure that represents, for a particular infection in ecosystem, a subset of infected organisms and for each infected organism in the subset except the first one infected temporally, its infection acquisition from an infected host as a machine-readable link to that infected host.</documentation>
  </annotation>
  <sequence>
    <element name="thisCase" type="tns:CaseRecord" maxOccurs="1" minOccurs="1">
    </element>
    <element name="casesThisCaseInfected" type="tns:TransmissionTree" maxOccurs="unbounded" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:RelativeRiskDataSet
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#RelativeRiskDataSet_textualDescription apollo.tmp#RelativeRiskDataSet_caseCountArray apollo.tmp#RelativeRiskDataSet_controlCountArray apollo.tmp#RelativeRiskDataSet_referenceId
Used by
Model
Children tns:caseCountArray, tns:controlCountArray, tns:referenceId, tns:textualDescription
Source
 
<complexType name="RelativeRiskDataSet">
  <sequence>
    <element name="textualDescription" type="token" maxOccurs="1" minOccurs="1"/>
    <element name="caseCountArray" type="tns:VariableCategoryValueTree" maxOccurs="1" minOccurs="1"/>
    <element name="controlCountArray" type="tns:VariableCategoryValueTree" maxOccurs="1" minOccurs="1"/>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="tns:Reference" maxOccurs="1" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:IndividualAndEpidemiologicalCharacteristics
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Individual_individualId apollo.tmp#Individual_age apollo.tmp#Individual_characteristics apollo.tmp#Individual apollo.tmp#IndividualAndEpidemiologicalCharacteristics_individualInfection apollo.tmp#IndividualAndEpidemiologicalCharacteristics_individualDisease apollo.tmp#IndividualAndEpidemiologicalCharacteristics_exposurePeriodContacts apollo.tmp#IndividualAndEpidemiologicalCharacteristics_exposurePeriodDefinition apollo.tmp#IndividualAndEpidemiologicalCharacteristics_transmissionPeriodContacts apollo.tmp#IndividualAndEpidemiologicalCharacteristics_transmissionPeriodDefinition
Type extension of tns:Individual
Type hierarchy
Model
Children tns:age, tns:characteristics, tns:exposurePeriodContacts, tns:exposurePeriodDefinition, tns:individualDisease, tns:individualId, tns:individualInfection, tns:transmissionPeriodContacts, tns:transmissionPeriodDefinition
Source
 
<complexType name="IndividualAndEpidemiologicalCharacteristics">
  <complexContent>
    <extension base="tns:Individual">
      <sequence>
        <element name="individualInfection" type="tns:IndividualInfection" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="individualDisease" type="tns:IndividualDisease" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="exposurePeriodContacts" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="exposurePeriodDefinition" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="transmissionPeriodContacts" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="transmissionPeriodDefinition" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="0">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:IndividualInfection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#IndividualInfection_pathogenId apollo.tmp#IndividualInfection_infectionOutcomesWithDates
Used by
Model
Children tns:infectionOutcomesWithDates, tns:pathogenId
Source
 
<complexType name="IndividualInfection">
  <sequence>
    <element name="pathogenId" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1">
    </element>
    <element name="infectionOutcomesWithDates" type="tns:InfectionOutcomeWithDate" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:InfectionOutcomeWithDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionOutcomeWithDate_infectionOutcome apollo.tmp#InfectionOutcomeWithDate_date
Used by
Model
Children tns:date, tns:infectionOutcome
Source
 
<complexType name="InfectionOutcomeWithDate">
  <sequence>
    <element name="infectionOutcome" type="tns:InfectionOutcomeEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="date" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Simple Type tns:InfectionOutcomeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration infectious
enumeration immune
Used by
Source
 
<simpleType name="InfectionOutcomeEnum">
  <restriction base="string">
    <enumeration value="infectious"/>
    <enumeration value="immune"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:IndividualDisease
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.
Diagram
Diagram apollo.tmp#IndividualDisease_snomedId apollo.tmp#IndividualDisease_diseaseOutcomesWithDates
Used by
Model
Children tns:diseaseOutcomesWithDates, tns:snomedId
Source
 
<complexType name="IndividualDisease" sawsdl:modelReference="http://purl.obolibrary.org/obo/OGMS_0000031">
  <annotation>
    <documentation>A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.</documentation>
  </annotation>
  <sequence>
    <element name="snomedId" type="tns:SnomedId" maxOccurs="1" minOccurs="1">
    </element>
    <element name="diseaseOutcomesWithDates" type="tns:DiseaseOutcomeWithDate" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:DiseaseOutcomeWithDate
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeWithDate_infectionOutcome apollo.tmp#DiseaseOutcomeWithDate_date
Used by
Model
Children tns:date, tns:infectionOutcome
Source
 
<complexType name="DiseaseOutcomeWithDate">
  <sequence>
    <element name="infectionOutcome" type="tns:InfectionOutcomeEnum" maxOccurs="1" minOccurs="1">
    </element>
    <element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="date" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ConditionalIndividualBehavior
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Behavior apollo.tmp#ConditionalIndividualBehavior_behavior apollo.tmp#ConditionalIndividualBehavior_conditionalProbability
Type extension of tns:Behavior
Type hierarchy
Model
Children tns:behavior, tns:conditionalProbability
Source
 
<complexType name="ConditionalIndividualBehavior">
  <complexContent>
    <extension base="tns:Behavior">
      <sequence>
        <element name="behavior" type="tns:BehaviorEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="conditionalProbability" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000529" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A probability whose value is dependent upon the occurrence, known or presumed, of some process.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:BehaviorEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration absentFromWork
enumeration absentFromPreSchool
enumeration absentFromPrimarySchool
enumeration absentFromSecondarySchool
Used by
Source
 
<simpleType name="BehaviorEnum">
  <restriction base="string">
    <enumeration value="absentFromWork"/>
    <enumeration value="absentFromPreSchool"/>
    <enumeration value="absentFromPrimarySchool"/>
    <enumeration value="absentFromSecondarySchool"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:CaseSeries
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An investigation that has, as part, a population survey with an objective to count all participants in some disease outcome or some exposure process.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#CaseSeries_speciesOfCases apollo.tmp#CaseSeries_caseSeriesDescription apollo.tmp#CaseSeries_caseRecords apollo.tmp#CaseSeries_caseDefinitions apollo.tmp#CaseSeries_caseSeriesStartDate apollo.tmp#CaseSeries_caseSeriesEndDate apollo.tmp#CaseSeries_location apollo.tmp#CaseSeries_causalPathogen apollo.tmp#CaseSeries_curator apollo.tmp#CaseSeries_editHistory apollo.tmp#CaseSeries_reviewedBy apollo.tmp#CaseSeries_acknowledgements
Type extension of tns:ApolloIndexableItem
Type hierarchy
Model
Children tns:acknowledgements, tns:caseDefinitions, tns:caseRecords, tns:caseSeriesDescription, tns:caseSeriesEndDate, tns:caseSeriesStartDate, tns:causalPathogen, tns:curator, tns:editHistory, tns:location, tns:reviewedBy, tns:speciesOfCases
Source
 
<complexType name="CaseSeries" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000558">
  <annotation>
    <documentation>An investigation that has, as part, a population survey with an objective to count all participants in some disease outcome or some exposure process.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="speciesOfCases" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
        <element name="caseSeriesDescription" type="token" maxOccurs="1" minOccurs="0"/>
        <element name="caseRecords" type="tns:CaseRecord" maxOccurs="unbounded" minOccurs="1"/>
        <element name="caseDefinitions" type="tns:CaseDefinition" maxOccurs="unbounded" minOccurs="0"/>
        <element name="caseSeriesStartDate" type="date" maxOccurs="1" minOccurs="0"/>
        <element name="caseSeriesEndDate" type="date" maxOccurs="1" minOccurs="0"/>
        <element name="location" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="0"/>
        <element name="causalPathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="0"/>
        <element name="curator" type="string" maxOccurs="1" minOccurs="0"/>
        <element name="editHistory" type="string" maxOccurs="unbounded" minOccurs="0"/>
        <element name="reviewedBy" type="string" maxOccurs="unbounded" minOccurs="0"/>
        <element name="acknowledgements" sawsdl:modelReference="http://purl.obolibrary.org/obo/IAO_0000324" type="string" maxOccurs="unbounded" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DeprecatedCaseCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DeprecatedCaseCount_countTitle apollo.tmp#DeprecatedCaseCount_caseDefinitionsIncluded apollo.tmp#DeprecatedCaseCount_totalCount apollo.tmp#DeprecatedCaseCount_caseCountArray apollo.tmp#DeprecatedCaseCount_temporalCountArrayWithUniformIntervals apollo.tmp#DeprecatedCaseCount_referenceId
Model
Children tns:caseCountArray, tns:caseDefinitionsIncluded, tns:countTitle, tns:referenceId, tns:temporalCountArrayWithUniformIntervals, tns:totalCount
Source
 
<complexType name="DeprecatedCaseCount">
  <sequence>
    <element name="countTitle" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="caseDefinitionsIncluded" type="tns:CaseDefinitionEnum" maxOccurs="unbounded" minOccurs="1"/>
    <choice>
      <element name="totalCount" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
      <element name="caseCountArray" type="tns:CaseCountArray" maxOccurs="1" minOccurs="1"/>
      <element name="temporalCountArrayWithUniformIntervals" type="tns:TemporalCountArrayWithUniformIntervals" maxOccurs="1" minOccurs="1"/>
    </choice>
    <element name="referenceId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000519" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CaseCountArray
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="CaseCountArray"/>
[ top ]
Complex Type tns:DateSpanWithNoDataCollection
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DateSpanWithNoDataCollection_startDate apollo.tmp#DateSpanWithNoDataCollection_endDate
Model
Children tns:endDate, tns:startDate
Source
 
<complexType name="DateSpanWithNoDataCollection">
  <sequence>
    <element name="startDate" type="date" minOccurs="1" maxOccurs="1"/>
    <element name="endDate" type="date" minOccurs="1" maxOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CaseRecordCategoricalVariables
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseRecordCategoricalVariables_someWayToIdentifyOutbreak apollo.tmp#CaseRecordCategoricalVariables_categoricalVariablesAndCategories
Model
Children tns:categoricalVariablesAndCategories, tns:someWayToIdentifyOutbreak
Source
 
<complexType name="CaseRecordCategoricalVariables">
  <sequence>
    <element name="someWayToIdentifyOutbreak" type="string" maxOccurs="1" minOccurs="1">
    </element>
    <element name="categoricalVariablesAndCategories" type="tns:CaseRecordCategoricalVariable" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CaseRecordCategoricalVariable
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseRecordCategoricalVariable_categoricalVariable apollo.tmp#CaseRecordCategoricalVariable_categories
Used by
Model
Children tns:categoricalVariable, tns:categories
Source
 
<complexType name="CaseRecordCategoricalVariable">
  <sequence>
    <element name="categoricalVariable" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000252" type="tns:CategoricalVariableEnum" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>a categorical variable is a variable which that can only assume a finite number of value and cast observation in a small number of categories</documentation>
      </annotation>
    </element>
    <element name="categories" type="tns:CategoryDefinition" maxOccurs="unbounded" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CaseVariableAndValue
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CaseVariableAndValue_variable apollo.tmp#CaseVariableAndValue_categoryDefinition apollo.tmp#CaseVariableAndValue_value
Model
Children tns:categoryDefinition, tns:value, tns:variable
Source
 
<complexType name="CaseVariableAndValue">
  <sequence>
    <element name="variable" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000258" type="string">
      <annotation>
        <documentation>a variable is a data item which can assume any of a set of values, either as determined by an agent or as randomly occuring through observation.</documentation>
      </annotation>
    </element>
    <element name="categoryDefinition" type="tns:CategoryDefinition" maxOccurs="1" minOccurs="1">
    </element>
    <element name="value" type="string"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:EditorNote
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EditorNote_id apollo.tmp#EditorNote_title apollo.tmp#EditorNote_editor apollo.tmp#EditorNote_note
Model
Children tns:editor, tns:id, tns:note, tns:title
Source
 
<complexType name="EditorNote">
  <sequence>
    <element name="id" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
    <element name="title" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="editor" type="string" maxOccurs="1" minOccurs="0"/>
    <element name="note" type="string" maxOccurs="1" minOccurs="0">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:CountType
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="CountType"/>
[ top ]
Complex Type tns:IntegerCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CountType apollo.tmp#IntegerCount_integer
Type extension of tns:CountType
Type hierarchy
Model
Children tns:integer
Source
 
<complexType name="IntegerCount">
  <complexContent>
    <extension base="tns:CountType">
      <sequence>
        <element name="integer" type="integer" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:DoubleCount
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CountType apollo.tmp#DoubleCount_double
Type extension of tns:CountType
Type hierarchy
Model
Children tns:double
Source
 
<complexType name="DoubleCount">
  <complexContent>
    <extension base="tns:CountType">
      <sequence>
        <element name="double" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:GenderCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#GenderCategoryDefinition_sex
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:sex
Source
 
<complexType name="GenderCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="sex" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000007" type="tns:GenderEnum" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:SourceOfInfectionCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#SourceOfInfectionCategoryDefinition_sourceOfInfection
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:sourceOfInfection
Source
 
<complexType name="SourceOfInfectionCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="sourceOfInfection" type="tns:SourceOfInfectionEnum" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:SourceOfInfectionEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration syringe
enumeration infectiousHost
enumeration eitherSyringeOrInfectiousHost
Used by
Source
 
<simpleType name="SourceOfInfectionEnum">
  <restriction base="string">
    <enumeration value="syringe"/>
    <enumeration value="infectiousHost"/>
    <enumeration value="eitherSyringeOrInfectiousHost"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:DiseaseOutcomeCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#DiseaseOutcomeCategoryDefinition_diseaseOutcome
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:diseaseOutcome
Source
 
<complexType name="DiseaseOutcomeCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="diseaseOutcome" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000204" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:TimeSpanCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies a time span on a specified time scale by giving a start time and a duration.
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#TimeSpanCategoryDefinition_unitOfTime apollo.tmp#TimeSpanCategoryDefinition_timeZeroReference apollo.tmp#TimeSpanCategoryDefinition_startOfTimeSpan apollo.tmp#TimeSpanCategoryDefinition_durationInTimeUnits
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:durationInTimeUnits, tns:startOfTimeSpan, tns:timeZeroReference, tns:unitOfTime
Source
 
<complexType name="TimeSpanCategoryDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000242">
  <annotation>
    <documentation>An information content entity that specifies a time span on a specified time scale by giving a start time and a duration.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="unitOfTime" sawsdl:modelReference="http://purl.obolibrary.org/obo/UO_0000003" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="timeZeroReference" type="tns:TimeScaleEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="startOfTimeSpan" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
        <element name="durationInTimeUnits" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:RealTimePointCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that designates a temporal boundary
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#RealTimePointCategoryDefinition_offsetFromUtcInHours apollo.tmp#RealTimePointCategoryDefinition_date
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:date, tns:offsetFromUtcInHours
Source
 
<complexType name="RealTimePointCategoryDefinition" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000376">
  <annotation>
    <documentation>An information content entity that designates a temporal boundary</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="0">
        </element>
        <element name="date" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000429" type="date" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:PlaceCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#PlaceCategoryDefinition_place
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:place
Source
 
<complexType name="PlaceCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="place" sawsdl:modelReference="http://purl.obolibrary.org/obo/OMRSE_00000062" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:HealthcareFacilityCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#HealthcareFacilityCategoryDefinition_healthcareFacilityId
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:healthcareFacilityId
Source
 
<complexType name="HealthcareFacilityCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="healthcareFacilityId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000506" type="tns:RheaHealthcareFacilityEnum" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A healthcare facility identifier that refers to some architectural structure that is the bearer of some healthcare function.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:RheaHealthcareFacilityEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration XXXX
enumeration YYYY
Used by
Source
 
<simpleType name="RheaHealthcareFacilityEnum">
  <restriction base="string">
    <enumeration value="XXXX"/>
    <enumeration value="YYYY"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:MaritalStatusCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#MaritalStatusCategoryDefinition_maritalStatus
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:maritalStatus
Source
 
<complexType name="MaritalStatusCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="maritalStatus" type="tns:MaritalStatusEnum" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:MaritalStatusEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration marriedSpousePresent
enumeration marriedSpouseAbsent
enumeration divorced
enumeration separated
enumeration widowed
enumeration neverMarried
Used by
Source
 
<simpleType name="MaritalStatusEnum">
  <restriction base="string">
    <enumeration value="marriedSpousePresent"/>
    <enumeration value="marriedSpouseAbsent"/>
    <enumeration value="divorced"/>
    <enumeration value="separated"/>
    <enumeration value="widowed"/>
    <enumeration value="neverMarried"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:SchoolingStatusCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#SchoolingStatusCategoryDefinition_schoolingStatus
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:schoolingStatus
Source
 
<complexType name="SchoolingStatusCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="schoolingStatus" type="tns:SchoolingStatusEnum" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:SchoolingStatusEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration currentlyEnrolledInSchool
enumeration previouslyEnrolledInSchool
enumeration neverEnrolledInSchool
Used by
Source
 
<simpleType name="SchoolingStatusEnum">
  <restriction base="string">
    <enumeration value="currentlyEnrolledInSchool"/>
    <enumeration value="previouslyEnrolledInSchool"/>
    <enumeration value="neverEnrolledInSchool"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:DisabilityStatusCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#DisabilityStatusCategoryDefinition_disabilityStatus
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:disabilityStatus
Source
 
<complexType name="DisabilityStatusCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="disabilityStatus" type="tns:DisabilityStatusEnum" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:DisabilityStatusEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration disabled
enumeration notDisabled
Used by
Source
 
<simpleType name="DisabilityStatusEnum">
  <restriction base="string">
    <enumeration value="disabled"/>
    <enumeration value="notDisabled"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:EmploymentStatusCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#EmploymentStatusCategoryDefinition_employmentStatus
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:employmentStatus
Source
 
<complexType name="EmploymentStatusCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="employmentStatus" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000570" type="tns:EmploymentStatusEnum" maxOccurs="1" minOccurs="1">
          <annotation>
            <documentation>A data item that denotes some context in which an individual realizes some employee role if he or she is a member of the labor force, or the context in which he or she is not a member of the labor force according to certain prespecified conditions.</documentation>
          </annotation>
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Simple Type tns:EmploymentStatusEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration armedForces
enumeration inLaborForceEmployedAtWork
enumeration inLaborForceEmployedNotAtWorkLastWeek
enumeration inLaborForceUnemployedExperiencedWorker
enumeration inLaborForceUnemployedExperiencedWorker
enumeration notInLaborForceHouseworker
enumeration notInLaborForceUnableToWork
enumeration notInLaborForceSchool
enumeration notInLaborForceOther
enumeration notInLaborForceUnpaidLessThan15Hours
Used by
Source
 
<simpleType name="EmploymentStatusEnum">
  <restriction base="string">
    <enumeration value="armedForces"/>
    <enumeration value="inLaborForceEmployedAtWork"/>
    <enumeration value="inLaborForceEmployedNotAtWorkLastWeek"/>
    <enumeration value="inLaborForceUnemployedExperiencedWorker"/>
    <enumeration value="inLaborForceUnemployedExperiencedWorker"/>
    <enumeration value="notInLaborForceHouseworker"/>
    <enumeration value="notInLaborForceUnableToWork"/>
    <enumeration value="notInLaborForceSchool"/>
    <enumeration value="notInLaborForceOther"/>
    <enumeration value="notInLaborForceUnpaidLessThan15Hours"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:MeasuredQuantityRangeCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#MeasuredQuantityRangeCategoryDefinition_unitOfMeasure apollo.tmp#MeasuredQuantityRangeCategoryDefinition_lowerBound apollo.tmp#MeasuredQuantityRangeCategoryDefinition_upperBound
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:lowerBound, tns:unitOfMeasure, tns:upperBound
Source
 
<complexType name="MeasuredQuantityRangeCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="unitOfMeasure" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1"/>
        <element name="lowerBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000436" type="tns:Bound" maxOccurs="1" minOccurs="1"/>
        <element name="upperBound" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000447" type="tns:Bound" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:SimulatorCountOutputSpecification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SimulatorCountOutputSpecification_simulatorCountOutputSpecificationId apollo.tmp#SimulatorCountOutputSpecification_speciesToCount apollo.tmp#SimulatorCountOutputSpecification_thingsToCount apollo.tmp#SimulatorCountOutputSpecification_eventFrequencyMeasure apollo.tmp#SimulatorCountOutputSpecification_temporalGranularity apollo.tmp#SimulatorCountOutputSpecification_spatialGranularity apollo.tmp#SimulatorCountOutputSpecification_placeType apollo.tmp#SimulatorCountOutputSpecification_individualControlMeasureStates apollo.tmp#SimulatorCountOutputSpecification_infectionStates apollo.tmp#SimulatorCountOutputSpecification_infectionStateTransitions apollo.tmp#SimulatorCountOutputSpecification_diseaseOutcomes apollo.tmp#SimulatorCountOutputSpecification_diseaseOutcomeTransitions apollo.tmp#SimulatorCountOutputSpecification_otherVariables
Used by
Model
Children tns:diseaseOutcomeTransitions, tns:diseaseOutcomes, tns:eventFrequencyMeasure, tns:individualControlMeasureStates, tns:infectionStateTransitions, tns:infectionStates, tns:otherVariables, tns:placeType, tns:simulatorCountOutputSpecificationId, tns:spatialGranularity, tns:speciesToCount, tns:temporalGranularity, tns:thingsToCount
Source
 
<complexType name="SimulatorCountOutputSpecification">
  <sequence>
    <element name="simulatorCountOutputSpecificationId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
    </element>
    <choice>
      <element name="speciesToCount" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
      <element name="thingsToCount" type="string" maxOccurs="1" minOccurs="1"/>
    </choice>
    <element name="eventFrequencyMeasure" type="tns:EventFrequencyEnum" maxOccurs="1" minOccurs="1"/>
    <element name="temporalGranularity" type="tns:TemporalGranularityEnum" maxOccurs="1" minOccurs="1"/>
    <element name="spatialGranularity" type="tns:SpatialGranularityEnum" maxOccurs="1" minOccurs="1"/>
    <element name="placeType" type="tns:PlaceEnum" maxOccurs="unbounded" minOccurs="0"/>
    <element name="individualControlMeasureStates" type="tns:IndividualControlMeasureStateEnum" maxOccurs="unbounded" minOccurs="0">
    </element>
    <element name="infectionStates" type="tns:InfectionStateEnum" maxOccurs="unbounded" minOccurs="0">
    </element>
    <element name="infectionStateTransitions" type="tns:InfectionStateTransition" maxOccurs="unbounded" minOccurs="0">
    </element>
    <element name="diseaseOutcomes" type="tns:DiseaseOutcomeEnum" maxOccurs="unbounded" minOccurs="0">
    </element>
    <element name="diseaseOutcomeTransitions" type="tns:DiseaseOutcomeTransition" maxOccurs="unbounded" minOccurs="0">
    </element>
    <element name="otherVariables" type="tns:VariableAndCategoryDefinitions" maxOccurs="unbounded" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:EventFrequencyEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration incidence
enumeration prevelance
Used by
Source
 
<simpleType name="EventFrequencyEnum">
  <restriction base="string">
    <enumeration value="incidence"/>
    <enumeration value="prevelance"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:TemporalGranularityEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration entireSimulation
enumeration eachSimulationTimestep
Used by
Source
 
<simpleType name="TemporalGranularityEnum">
  <restriction base="string">
    <enumeration value="entireSimulation"/>
    <enumeration value="eachSimulationTimestep"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:SpatialGranularityEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration none
enumeration admin0
enumeration admin1
enumeration admin2
enumeration admin3
enumeration admin4
enumeration admin5
enumeration latLong
Used by
Source
 
<simpleType name="SpatialGranularityEnum">
  <restriction base="string">
    <enumeration value="none"/>
    <enumeration value="admin0"/>
    <enumeration value="admin1"/>
    <enumeration value="admin2"/>
    <enumeration value="admin3"/>
    <enumeration value="admin4"/>
    <enumeration value="admin5"/>
    <enumeration value="latLong"/>
  </restriction>
</simpleType>
[ top ]
Simple Type tns:IndividualControlMeasureStateEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration vaccinated
enumeration antiViralProphylaxed
enumeration quarantined
enumeration vaccinatedAndAntiViralProphylaxed
enumeration vaccinatedAndQuarantined
enumeration antiViralProphylaxedAndQuarantined
enumeration vaccinatedAndAntiViralProphylaxedAndQuarantined
Used by
Source
 
<simpleType name="IndividualControlMeasureStateEnum">
  <restriction base="string">
    <enumeration value="vaccinated"/>
    <enumeration value="antiViralProphylaxed"/>
    <enumeration value="quarantined"/>
    <enumeration value="vaccinatedAndAntiViralProphylaxed"/>
    <enumeration value="vaccinatedAndQuarantined"/>
    <enumeration value="antiViralProphylaxedAndQuarantined"/>
    <enumeration value="vaccinatedAndAntiViralProphylaxedAndQuarantined"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:InfectionStateTransition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectionStateTransition_apolloLabel apollo.tmp#InfectionStateTransition_priorInfectionState apollo.tmp#InfectionStateTransition_newInfectionState
Used by
Model
Children tns:apolloLabel, tns:newInfectionState, tns:priorInfectionState
Source
 
<complexType name="InfectionStateTransition">
  <sequence>
    <element name="apolloLabel" type="tns:InfectionStateTransitionEnum" maxOccurs="1" minOccurs="0"/>
    <element name="priorInfectionState" type="tns:InfectionStateEnum" maxOccurs="1" minOccurs="0">
    </element>
    <element name="newInfectionState" type="tns:InfectionStateEnum" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:InfectionStateTransitionEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="InfectionStateTransitionEnum"/>
[ top ]
Complex Type tns:DiseaseOutcomeTransition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DiseaseOutcomeTransition_apolloLabel apollo.tmp#DiseaseOutcomeTransition_priorDiseaseOutcome apollo.tmp#DiseaseOutcomeTransition_newDiseaseOutcome
Used by
Model
Children tns:apolloLabel, tns:newDiseaseOutcome, tns:priorDiseaseOutcome
Source
 
<complexType name="DiseaseOutcomeTransition">
  <sequence>
    <element name="apolloLabel" type="tns:diseaseOutcomeTransitionEnum" maxOccurs="1" minOccurs="0"/>
    <element name="priorDiseaseOutcome" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="0">
    </element>
    <element name="newDiseaseOutcome" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:diseaseOutcomeTransitionEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="diseaseOutcomeTransitionEnum"/>
[ top ]
Complex Type tns:VariableAndCategoryDefinitions
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#VariableAndCategoryDefinitions_variable apollo.tmp#VariableAndCategoryDefinitions_categories
Used by
Model
Children tns:categories, tns:variable
Source
 
<complexType name="VariableAndCategoryDefinitions">
  <sequence>
    <element name="variable" sawsdl:modelReference="http://purl.obolibrary.org/obo/STATO_0000258" type="tns:CategoricalVariableEnum" maxOccurs="1" minOccurs="1"/>
    <element name="categories" type="tns:CategoryDefinition" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:SimulatorCountOutputResult
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SimulatorCountOutputResult_simulatorCountOutputSpecificationId apollo.tmp#SimulatorCountOutputResult_speciesToCount apollo.tmp#SimulatorCountOutputResult_thingsToCount apollo.tmp#SimulatorCountOutputResult_resultArray
Model
Children tns:resultArray, tns:simulatorCountOutputSpecificationId, tns:speciesToCount, tns:thingsToCount
Source
 
<complexType name="SimulatorCountOutputResult">
  <sequence>
    <element name="simulatorCountOutputSpecificationId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1">
    </element>
    <choice>
      <element name="speciesToCount" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
      <element name="thingsToCount" type="string" maxOccurs="1" minOccurs="1"/>
    </choice>
    <element name="resultArray" type="tns:TemporalGranularityEnum" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:SimulatorCountOutput
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SimulatorCountOutputSpecification_simulatorCountOutputSpecificationId apollo.tmp#SimulatorCountOutputSpecification_speciesToCount apollo.tmp#SimulatorCountOutputSpecification_thingsToCount apollo.tmp#SimulatorCountOutputSpecification_eventFrequencyMeasure apollo.tmp#SimulatorCountOutputSpecification_temporalGranularity apollo.tmp#SimulatorCountOutputSpecification_spatialGranularity apollo.tmp#SimulatorCountOutputSpecification_placeType apollo.tmp#SimulatorCountOutputSpecification_individualControlMeasureStates apollo.tmp#SimulatorCountOutputSpecification_infectionStates apollo.tmp#SimulatorCountOutputSpecification_infectionStateTransitions apollo.tmp#SimulatorCountOutputSpecification_diseaseOutcomes apollo.tmp#SimulatorCountOutputSpecification_diseaseOutcomeTransitions apollo.tmp#SimulatorCountOutputSpecification_otherVariables apollo.tmp#SimulatorCountOutputSpecification apollo.tmp#SimulatorCountOutput_count apollo.tmp#SimulatorCountOutput_countArray
Type extension of tns:SimulatorCountOutputSpecification
Type hierarchy
Model
Children tns:count, tns:countArray, tns:diseaseOutcomeTransitions, tns:diseaseOutcomes, tns:eventFrequencyMeasure, tns:individualControlMeasureStates, tns:infectionStateTransitions, tns:infectionStates, tns:otherVariables, tns:placeType, tns:simulatorCountOutputSpecificationId, tns:spatialGranularity, tns:speciesToCount, tns:temporalGranularity, tns:thingsToCount
Source
 
<complexType name="SimulatorCountOutput">
  <complexContent>
    <extension base="tns:SimulatorCountOutputSpecification">
      <sequence>
        <choice>
          <element name="count" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000032" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
          <element name="countArray" type="tns:VariableCategoryValueTree" maxOccurs="1" minOccurs="1">
          </element>
        </choice>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:InfectiousDiseaseTransmissionExperimentSpecification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseTransmissionExperimentSpecification_infectiousDiseaseScenarioWithoutIntervention apollo.tmp#InfectiousDiseaseTransmissionExperimentSpecification_infectiousDiseaseControlStrategies apollo.tmp#InfectiousDiseaseTransmissionExperimentSpecification_infectiousDiseaseTransmissionModelIds apollo.tmp#InfectiousDiseaseTransmissionExperimentSpecification_sensitivityAnalyses
Type extension of tns:ApolloIndexableItem
Type hierarchy
Model
Children tns:infectiousDiseaseControlStrategies, tns:infectiousDiseaseScenarioWithoutIntervention, tns:infectiousDiseaseTransmissionModelIds, tns:sensitivityAnalyses
Source
 
<complexType name="InfectiousDiseaseTransmissionExperimentSpecification">
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="infectiousDiseaseScenarioWithoutIntervention" type="tns:InfectiousDiseaseScenario" maxOccurs="1" minOccurs="1"/>
        <element name="infectiousDiseaseControlStrategies" type="tns:InfectiousDiseaseControlStrategy" maxOccurs="unbounded" minOccurs="0"/>
        <element name="infectiousDiseaseTransmissionModelIds" type="tns:SoftwareIdentification" maxOccurs="unbounded" minOccurs="1"/>
        <element name="sensitivityAnalyses" type="tns:SensitivityAnalysisSpecification" maxOccurs="unbounded" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:InfectiousDiseaseControlStrategy
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#InfectiousDiseaseControlStrategy_controlMeasures
Used by
Model
Children tns:controlMeasures
Source
 
<complexType name="InfectiousDiseaseControlStrategy">
  <sequence>
    <element name="controlMeasures" type="tns:InfectiousDiseaseControlMeasure" maxOccurs="unbounded" minOccurs="0"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:SensitivityAnalysisSpecification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="SensitivityAnalysisSpecification"/>
[ top ]
Complex Type tns:InfectiousDiseaseDecisionAnalysisSpecificationAndResults
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseDecisionAnalysisSpecificationAndResults_baseCaseDecisionModel apollo.tmp#InfectiousDiseaseDecisionAnalysisSpecificationAndResults_baseCaseResult apollo.tmp#InfectiousDiseaseDecisionAnalysisSpecificationAndResults_sensitivityAnalysisSpecificationsAndResults
Type extension of tns:ApolloIndexableItem
Type hierarchy
Model
Children tns:baseCaseDecisionModel, tns:baseCaseResult, tns:sensitivityAnalysisSpecificationsAndResults
Source
 
<complexType name="InfectiousDiseaseDecisionAnalysisSpecificationAndResults">
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="baseCaseDecisionModel" type="tns:InfectiousDiseaseControlDecisionModel" maxOccurs="1" minOccurs="1"/>
        <element name="baseCaseResult" type="tns:BaseCaseResult" maxOccurs="1" minOccurs="0"/>
        <element name="sensitivityAnalysisSpecificationsAndResults" type="tns:SensitivityAnalysisSpecificationAndResult" maxOccurs="unbounded" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:InfectiousDiseaseControlDecisionModel
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlDecisionModel_controlStrategyAlternatives apollo.tmp#InfectiousDiseaseControlDecisionModel_diseaseTransmissionModelChanceNode apollo.tmp#InfectiousDiseaseControlDecisionModel_infectiousDiseaseScenarioWithoutIntervention apollo.tmp#InfectiousDiseaseControlDecisionModel_utilityFunction
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:controlStrategyAlternatives, tns:diseaseTransmissionModelChanceNode, tns:infectiousDiseaseScenarioWithoutIntervention, tns:utilityFunction
Source
 
<complexType name="InfectiousDiseaseControlDecisionModel">
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="controlStrategyAlternatives" type="tns:InfectiousDiseaseControlStrategy" maxOccurs="unbounded" minOccurs="1"/>
        <element name="diseaseTransmissionModelChanceNode" type="tns:ModelIdAndProbability" maxOccurs="unbounded" minOccurs="1"/>
        <element name="infectiousDiseaseScenarioWithoutIntervention" type="tns:InfectiousDiseaseScenario" maxOccurs="1" minOccurs="1"/>
        <element name="utilityFunction" type="tns:UtilityFunction" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ModelIdAndProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ModelIdAndProbability_modelId apollo.tmp#ModelIdAndProbability_probability
Used by
Model
Children tns:modelId, tns:probability
Source
 
<complexType name="ModelIdAndProbability">
  <sequence>
    <element name="modelId" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000507" type="string" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>An identifier that refers to some disease transmission model model.</documentation>
      </annotation>
    </element>
    <element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:UtilityFunction
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#UtilityFunction_lambdaFunction apollo.tmp#UtilityFunction_textDescription
Used by
Model
Children tns:lambdaFunction, tns:textDescription
Source
 
<complexType name="UtilityFunction">
  <sequence>
    <element name="lambdaFunction" type="string" maxOccurs="1" minOccurs="1"/>
    <choice>
      <element name="textDescription" type="string" maxOccurs="1" minOccurs="1"/>
    </choice>
  </sequence>
</complexType>
[ top ]
Complex Type tns:BaseCaseResult
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#BaseCaseResult_decisionAlternatives apollo.tmp#BaseCaseResult_expectedUtilities
Used by
Model
Children tns:decisionAlternatives, tns:expectedUtilities
Source
 
<complexType name="BaseCaseResult">
  <sequence>
    <element name="decisionAlternatives" type="tns:DecisionAlternative" maxOccurs="unbounded" minOccurs="1"/>
    <element name="expectedUtilities" type="double" maxOccurs="unbounded" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:DecisionAlternative
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#DecisionAlternative_singleMeasure apollo.tmp#DecisionAlternative_combinationMeasure apollo.tmp#DecisionAlternative_SequentialCombinationMeasure
Used by
Model
Children tns:SequentialCombinationMeasure, tns:combinationMeasure, tns:singleMeasure
Source
 
<complexType name="DecisionAlternative">
  <sequence>
    <element name="singleMeasure" type="string"/>
    <element name="combinationMeasure" type="string"/>
    <element name="SequentialCombinationMeasure" type="string"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:SensitivityAnalysisSpecificationAndResult
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#SensitivityAnalysisSpecificationAndResult_sensitivityAnalysisSpecification apollo.tmp#SensitivityAnalysisSpecificationAndResult_sensitivityAnalysisResult
Type extension of tns:ApolloIndexableItem
Type hierarchy
Used by
Model
Children tns:sensitivityAnalysisResult, tns:sensitivityAnalysisSpecification
Source
 
<complexType name="SensitivityAnalysisSpecificationAndResult">
  <complexContent>
    <extension base="tns:ApolloIndexableItem">
      <sequence>
        <element name="sensitivityAnalysisSpecification" type="tns:SensitivityAnalysisSpecification" maxOccurs="1" minOccurs="1"/>
        <element name="sensitivityAnalysisResult" type="tns:SensitivityAnalysisResult" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:SensitivityAnalysisResult
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Used by
Source
 
<complexType name="SensitivityAnalysisResult"/>
[ top ]
Complex Type tns:SensitivityAnalysis
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Source
 
<complexType name="SensitivityAnalysis"/>
[ top ]
Complex Type tns:ExpectedUtility
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Source
 
<complexType name="ExpectedUtility"/>
[ top ]
Complex Type tns:GesParametersForContactAndTransmission
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GesParametersForContactAndTransmission_seasonalityFunctionParameters apollo.tmp#GesParametersForContactAndTransmission_infectiousnessParameterSet apollo.tmp#GesParametersForContactAndTransmission_contactModelsForSettings
Model
Children tns:contactModelsForSettings, tns:infectiousnessParameterSet, tns:seasonalityFunctionParameters
Source
 
<complexType name="GesParametersForContactAndTransmission">
  <sequence>
    <element name="seasonalityFunctionParameters" type="tns:SeasonalityFunctionParameters" maxOccurs="1" minOccurs="1">
    </element>
    <element name="infectiousnessParameterSet" type="tns:GesInfectiousnessParameterSet" maxOccurs="1" minOccurs="1"/>
    <element name="contactModelsForSettings" type="tns:ContactModelForSetting" maxOccurs="6" minOccurs="6"/>
  </sequence>
</complexType>
[ top ]
Complex Type tns:SeasonalityFunctionParameters
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SeasonalityFunctionParameters_maximumSeasonalLatitude apollo.tmp#SeasonalityFunctionParameters_minimumSeasonalLatitude apollo.tmp#SeasonalityFunctionParameters_seasonalTemporalOffset
Used by
Model
Children tns:maximumSeasonalLatitude, tns:minimumSeasonalLatitude, tns:seasonalTemporalOffset
Source
 
<complexType name="SeasonalityFunctionParameters" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000273">
  <sequence>
    <element name="maximumSeasonalLatitude" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000274" type="double" maxOccurs="1" minOccurs="1">
    </element>
    <element name="minimumSeasonalLatitude" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000275" type="double" maxOccurs="1" minOccurs="1">
    </element>
    <element name="seasonalTemporalOffset" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000276" type="double" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:GesInfectiousnessParameterSet
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#GesInfectiousnessParameterSet_infectiousnessProfile apollo.tmp#GesInfectiousnessParameterSet_treat_inf apollo.tmp#GesInfectiousnessParameterSet_prophylaxis_inf apollo.tmp#GesInfectiousnessParameterSet_vacc_inf apollo.tmp#GesInfectiousnessParameterSet_relative_inf_symptomatic_multiplier
Used by
Model
Children tns:infectiousnessProfile, tns:prophylaxis_inf, tns:relative_inf_symptomatic_multiplier, tns:treat_inf, tns:vacc_inf
Source
 
<complexType name="GesInfectiousnessParameterSet">
  <sequence>
    <element name="infectiousnessProfile" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000226" type="tns:ContinuousParametricProbabilityDistribution" maxOccurs="1" minOccurs="0">
      <annotation>
        <documentation>A process profile that specifies the degree to which a host is likely to pass on an infection to a susceptible organism.</documentation>
      </annotation>
    </element>
    <element name="treat_inf" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
    </element>
    <element name="prophylaxis_inf" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
    </element>
    <element name="vacc_inf" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1">
    </element>
    <element name="relative_inf_symptomatic_multiplier" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ContactModelForSetting
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactModelForSetting_spatialKernelParametersForSetting apollo.tmp#ContactModelForSetting_probSymptomaticInfectionClinicallyDetected apollo.tmp#ContactModelForSetting_symptomaticInfectionMultiplier apollo.tmp#ContactModelForSetting_probSevereInfectionClinicallyDetected
Used by
Model
Children tns:probSevereInfectionClinicallyDetected, tns:probSymptomaticInfectionClinicallyDetected, tns:spatialKernelParametersForSetting, tns:symptomaticInfectionMultiplier
Source
 
<complexType name="ContactModelForSetting">
  <sequence>
    <element name="spatialKernelParametersForSetting" type="tns:SpatialKernelFunctionParameters" maxOccurs="1" minOccurs="1">
    </element>
    <element name="probSymptomaticInfectionClinicallyDetected" type="tns:Probability" maxOccurs="1" minOccurs="1">
    </element>
    <element name="symptomaticInfectionMultiplier" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
    </element>
    <element name="probSevereInfectionClinicallyDetected" type="tns:Probability" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:SpatialKernelFunctionParameters
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SpatialKernelFunctionParameters_type apollo.tmp#SpatialKernelFunctionParameters_a0 apollo.tmp#SpatialKernelFunctionParameters_a1 apollo.tmp#SpatialKernelFunctionParameters_b0 apollo.tmp#SpatialKernelFunctionParameters_b1 apollo.tmp#SpatialKernelFunctionParameters_c1 apollo.tmp#SpatialKernelFunctionParameters_cutoff
Used by
Model
Children tns:a0, tns:a1, tns:b0, tns:b1, tns:c1, tns:cutoff, tns:type
Source
 
<complexType name="SpatialKernelFunctionParameters">
  <sequence>
    <element name="type" type="token" maxOccurs="1" minOccurs="1">
    </element>
    <element name="a0" type="double" maxOccurs="1" minOccurs="1">
    </element>
    <element name="a1" type="double" maxOccurs="1" minOccurs="1">
    </element>
    <element name="b0" type="double" maxOccurs="1" minOccurs="1">
    </element>
    <element name="b1" type="double" maxOccurs="1" minOccurs="1">
    </element>
    <element name="c1" type="double" maxOccurs="1" minOccurs="1">
    </element>
    <element name="cutoff" type="double" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ContactModelForCommunity
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactModelForSetting_spatialKernelParametersForSetting apollo.tmp#ContactModelForSetting_probSymptomaticInfectionClinicallyDetected apollo.tmp#ContactModelForSetting_symptomaticInfectionMultiplier apollo.tmp#ContactModelForSetting_probSevereInfectionClinicallyDetected apollo.tmp#ContactModelForSetting apollo.tmp#ContactModelForCommunity_r_community apollo.tmp#ContactModelForCommunity_c_community apollo.tmp#ContactModelForCommunity_q_community
Type extension of tns:ContactModelForSetting
Type hierarchy
Model
Children tns:c_community, tns:probSevereInfectionClinicallyDetected, tns:probSymptomaticInfectionClinicallyDetected, tns:q_community, tns:r_community, tns:spatialKernelParametersForSetting, tns:symptomaticInfectionMultiplier
Source
 
<complexType name="ContactModelForCommunity">
  <complexContent>
    <extension base="tns:ContactModelForSetting">
      <sequence>
        <element name="r_community" type="tns:Rate" maxOccurs="1" minOccurs="1">
        </element>
        <element name="c_community" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
        </element>
        <element name="q_community" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ContactModelForHousehold
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactModelForSetting_spatialKernelParametersForSetting apollo.tmp#ContactModelForSetting_probSymptomaticInfectionClinicallyDetected apollo.tmp#ContactModelForSetting_symptomaticInfectionMultiplier apollo.tmp#ContactModelForSetting_probSevereInfectionClinicallyDetected apollo.tmp#ContactModelForSetting apollo.tmp#ContactModelForHousehold_r_household apollo.tmp#ContactModelForHousehold_c_household apollo.tmp#ContactModelForHousehold_q_household
Type extension of tns:ContactModelForSetting
Type hierarchy
Model
Children tns:c_household, tns:probSevereInfectionClinicallyDetected, tns:probSymptomaticInfectionClinicallyDetected, tns:q_household, tns:r_household, tns:spatialKernelParametersForSetting, tns:symptomaticInfectionMultiplier
Source
 
<complexType name="ContactModelForHousehold">
  <complexContent>
    <extension base="tns:ContactModelForSetting">
      <sequence>
        <element name="r_household" type="tns:Rate" maxOccurs="1" minOccurs="1">
        </element>
        <element name="c_household" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
        </element>
        <element name="q_household" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:ContactModelForPlace
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#ContactModelForSetting_spatialKernelParametersForSetting apollo.tmp#ContactModelForSetting_probSymptomaticInfectionClinicallyDetected apollo.tmp#ContactModelForSetting_symptomaticInfectionMultiplier apollo.tmp#ContactModelForSetting_probSevereInfectionClinicallyDetected apollo.tmp#ContactModelForSetting apollo.tmp#ContactModelForPlace_placeType apollo.tmp#ContactModelForPlace_r_place apollo.tmp#ContactModelForPlace_P_Pn_group apollo.tmp#ContactModelForPlace_probSymptomaticIndividualAbsent apollo.tmp#ContactModelForPlace_symptomaticAbsenteeMultiplier apollo.tmp#ContactModelForPlace_probSeverelyInfectedIndividualAbsent apollo.tmp#ContactModelForPlace_severelyInfectedAbsenteeMultiplier apollo.tmp#ContactModelForPlace_q_social
Type extension of tns:ContactModelForSetting
Type hierarchy
Model
Children tns:P_Pn_group, tns:placeType, tns:probSevereInfectionClinicallyDetected, tns:probSeverelyInfectedIndividualAbsent, tns:probSymptomaticIndividualAbsent, tns:probSymptomaticInfectionClinicallyDetected, tns:q_social, tns:r_place, tns:severelyInfectedAbsenteeMultiplier, tns:spatialKernelParametersForSetting, tns:symptomaticAbsenteeMultiplier, tns:symptomaticInfectionMultiplier
Source
 
<complexType name="ContactModelForPlace">
  <complexContent>
    <extension base="tns:ContactModelForSetting">
      <sequence>
        <element name="placeType" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1">
        </element>
        <element name="r_place" type="tns:Rate" maxOccurs="1" minOccurs="1">
        </element>
        <element name="P_Pn_group" type="tns:WithinGroupTransmissionProbability" maxOccurs="unbounded" minOccurs="0">
        </element>
        <element name="probSymptomaticIndividualAbsent" type="tns:Probability" maxOccurs="1" minOccurs="1">
        </element>
        <element name="symptomaticAbsenteeMultiplier" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
        </element>
        <element name="probSeverelyInfectedIndividualAbsent" type="tns:Probability" maxOccurs="1" minOccurs="1">
        </element>
        <element name="severelyInfectedAbsenteeMultiplier" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
        </element>
        <element name="q_social" type="tns:PositiveDouble" maxOccurs="1" minOccurs="1">
        </element>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:WithinGroupTransmissionProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#WithinGroupTransmissionProbability_groupType apollo.tmp#WithinGroupTransmissionProbability_probability
Used by
Model
Children tns:groupType, tns:probability
Source
 
<complexType name="WithinGroupTransmissionProbability">
  <sequence>
    <element name="groupType" type="token" maxOccurs="1" minOccurs="1">
    </element>
    <element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1">
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:ReceivingDestinationAndProbability
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#Behavior apollo.tmp#ReceivingDestinationAndProbability_receivingDestination apollo.tmp#ReceivingDestinationAndProbability_probability apollo.tmp#ReceivingDestinationAndProbability_transitTime
Type extension of tns:Behavior
Type hierarchy
Model
Children tns:probability, tns:receivingDestination, tns:transitTime
Source
 
<complexType name="ReceivingDestinationAndProbability">
  <complexContent>
    <extension base="tns:Behavior">
      <sequence>
        <element name="receivingDestination" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1"/>
        <element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
        <element name="transitTime" type="tns:Duration" maxOccurs="1" minOccurs="0"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:SimulatorTimeSpecification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An information content entity that specifies the length in time of a single simulator step (e.g., 1 day) and the requested run length of the simulation (number of steps).
Diagram
Diagram apollo.tmp#SimulatorTimeSpecification_unitOfTimeForSimulatorTimeStep apollo.tmp#SimulatorTimeSpecification_numberOfUnitsOfTimeInOneSimulatorTimeStep apollo.tmp#SimulatorTimeSpecification_runLength
Model
Children tns:numberOfUnitsOfTimeInOneSimulatorTimeStep, tns:runLength, tns:unitOfTimeForSimulatorTimeStep
Source
 
<complexType name="SimulatorTimeSpecification" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000183">
  <annotation>
    <documentation>An information content entity that specifies the length in time of a single simulator step (e.g., 1 day) and the requested run length of the simulation (number of steps).</documentation>
  </annotation>
  <sequence>
    <element name="unitOfTimeForSimulatorTimeStep" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000014" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>A time unit that is part of a simulation time step action specification.</documentation>
      </annotation>
    </element>
    <element name="numberOfUnitsOfTimeInOneSimulatorTimeStep" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000012" maxOccurs="1" minOccurs="1" type="tns:PositiveDouble">
      <annotation>
        <documentation>A numeral that is part of a simulation time step action specification.</documentation>
      </annotation>
    </element>
    <element name="runLength" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000015" type="positiveInteger" maxOccurs="1" minOccurs="1">
      <annotation>
        <documentation>The action specification that specifies the number of time steps a simulation is going to run.</documentation>
      </annotation>
    </element>
  </sequence>
</complexType>
[ top ]
Complex Type tns:LiberalSickLeaveControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infectious disease conrol straegy that seeks to reduce disease transmission by offering employees extra paid time off to stay home, in an attempt to reduce contacts that transmit disease in the workplace.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#LiberalSickLeaveControlMeasure_compliance
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Model
Children tns:compliance, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Source
 
<complexType name="LiberalSickLeaveControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000323">
  <annotation>
    <documentation>An infectious disease conrol straegy that seeks to reduce disease transmission by offering employees extra paid time off to stay home, in an attempt to reduce contacts that transmit disease in the workplace.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:OneWaySensitivityAnalysisOfContinousVariableSpecification
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#SensitivityAnalysisSpecification apollo.tmp#OneWaySensitivityAnalysisOfContinousVariableSpecification_xPathToVariable apollo.tmp#OneWaySensitivityAnalysisOfContinousVariableSpecification_minimumValue apollo.tmp#OneWaySensitivityAnalysisOfContinousVariableSpecification_maximumValue apollo.tmp#OneWaySensitivityAnalysisOfContinousVariableSpecification_numberOfDiscretizations
Type extension of tns:SensitivityAnalysisSpecification
Type hierarchy
Model
Children tns:maximumValue, tns:minimumValue, tns:numberOfDiscretizations, tns:xPathToVariable
Source
 
<complexType name="OneWaySensitivityAnalysisOfContinousVariableSpecification">
  <complexContent>
    <extension base="tns:SensitivityAnalysisSpecification">
      <sequence>
        <element name="xPathToVariable" type="token" maxOccurs="1" minOccurs="1"/>
        <element name="minimumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000432" type="double" maxOccurs="1" minOccurs="1"/>
        <element name="maximumValue" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000433" type="double" maxOccurs="1" minOccurs="1"/>
        <element name="numberOfDiscretizations" type="integer" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:VoluntaryHouseholdQuarantineControlMeasure
Namespace http://types.apollo.pitt.edu/v4_0_1/
Annotations
 
An infectious disease control strategy whereby the household members of infectious indivduals voluntarily stay at home to avoid further potentially infectious contacts.
Diagram
Diagram apollo.tmp#ApolloIndexableItem apollo.tmp#InfectiousDiseaseControlMeasure_description apollo.tmp#InfectiousDiseaseControlMeasure_location apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStartTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStopTime apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureResponseDelay apollo.tmp#InfectiousDiseaseControlMeasure_controlMeasureStandDownDelay apollo.tmp#InfectiousDiseaseControlMeasure_logisticalSystems apollo.tmp#InfectiousDiseaseControlMeasure_referenceId apollo.tmp#InfectiousDiseaseControlMeasure_templatedInfectiousDiseaseControlMeasureUrlsForSoftware apollo.tmp#InfectiousDiseaseControlMeasure apollo.tmp#VoluntaryHouseholdQuarantineControlMeasure_compliance
Type extension of tns:InfectiousDiseaseControlMeasure
Type hierarchy
Model
Children tns:compliance, tns:controlMeasureResponseDelay, tns:controlMeasureStandDownDelay, tns:controlMeasureStartTime, tns:controlMeasureStopTime, tns:description, tns:location, tns:logisticalSystems, tns:referenceId, tns:templatedInfectiousDiseaseControlMeasureUrlsForSoftware
Source
 
<complexType name="VoluntaryHouseholdQuarantineControlMeasure" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000322">
  <annotation>
    <documentation>An infectious disease control strategy whereby the household members of infectious indivduals voluntarily stay at home to avoid further potentially infectious contacts.</documentation>
  </annotation>
  <complexContent>
    <extension base="tns:InfectiousDiseaseControlMeasure">
      <sequence>
        <element name="compliance" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000139" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:LocationCategoryDefinition
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#CategoryDefinition apollo.tmp#LocationCategoryDefinition_spatialGranularity apollo.tmp#LocationCategoryDefinition_apolloLocationCode
Type extension of tns:CategoryDefinition
Type hierarchy
Model
Children tns:apolloLocationCode, tns:spatialGranularity
Source
 
<complexType name="LocationCategoryDefinition">
  <complexContent>
    <extension base="tns:CategoryDefinition">
      <sequence>
        <element name="spatialGranularity" type="tns:SpatialGranularityEnum" maxOccurs="1" minOccurs="1"/>
        <element name="apolloLocationCode" sawsdl:modelReference="http://purl.obolibrary.org/obo/APOLLO_SV_00000259" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="1"/>
      </sequence>
    </extension>
  </complexContent>
</complexType>
[ top ]
Complex Type tns:EpidemicForecast
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EpidemicForecast_timeOfForecast apollo.tmp#EpidemicForecast_modelIdentification apollo.tmp#EpidemicForecast_infectionBeingForecast apollo.tmp#EpidemicForecast_epidemicOutcomeBeingForecast
Used by
Model
Children tns:epidemicOutcomeBeingForecast, tns:infectionBeingForecast, tns:modelIdentification, tns:timeOfForecast
Source
 
<complexType name="EpidemicForecast">
  <sequence>
    <element name="timeOfForecast" type="string" maxOccurs="1" minOccurs="1">
    </element>
    <element name="modelIdentification" type="tns:SoftwareIdentification" maxOccurs="1" minOccurs="1"/>
    <element name="infectionBeingForecast" type="tns:Infection" maxOccurs="1" minOccurs="1"/>
    <element name="epidemicOutcomeBeingForecast" type="tns:EpidemicOutcomeEnum" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
Simple Type tns:EpidemicOutcomeEnum
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram
Type restriction of string
Facets
enumeration peak week of new infections
enumeration start week of epidemic transmission
enumeration maximum infection incidence
enumeration total incidence of infections
enumeration total incidence of diseaseA
enumeration total incidence of diseaseB
enumeration h
enumeration death
enumeration recovery
Used by
Source
 
<simpleType name="EpidemicOutcomeEnum">
  <restriction base="string">
    <enumeration value="peak week of new infections"/>
    <enumeration value="start week of epidemic transmission"/>
    <enumeration value="maximum infection incidence"/>
    <enumeration value="total incidence of infections"/>
    <enumeration value="total incidence of diseaseA"/>
    <enumeration value="total incidence of diseaseB"/>
    <enumeration value="h"/>
    <enumeration value="death"/>
    <enumeration value="recovery"/>
  </restriction>
</simpleType>
[ top ]
Complex Type tns:EpidemicForecasts
Namespace http://types.apollo.pitt.edu/v4_0_1/
Diagram
Diagram apollo.tmp#EpidemicForecasts_forecasts apollo.tmp#EpidemicForecasts_modelIdentification apollo.tmp#EpidemicForecasts_teamName apollo.tmp#EpidemicForecasts_teamMembers apollo.tmp#EpidemicForecasts_modelDescription apollo.tmp#EpidemicForecasts_modelInputs apollo.tmp#EpidemicForecasts_NewElement
Model
Children tns:NewElement, tns:forecasts, tns:modelDescription, tns:modelIdentification, tns:modelInputs, tns:teamMembers, tns:teamName
Source
 
<complexType name="EpidemicForecasts">
  <sequence>
    <element name="forecasts" type="tns:EpidemicForecast" maxOccurs="1" minOccurs="1">
    </element>
    <element name="modelIdentification" type="tns:SoftwareIdentification" maxOccurs="1" minOccurs="1"/>
    <element name="teamName" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="teamMembers" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="modelDescription" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="modelInputs" type="string" maxOccurs="1" minOccurs="1"/>
    <element name="NewElement" type="string" maxOccurs="1" minOccurs="1"/>
  </sequence>
</complexType>
[ top ]
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